RNA–Protein interactions for RNA: ENST00000550767.5

TUBA1A-207, Transcript of tubulin alpha 1a, humanhuman

TSL 1 (best) BASIC

Gene TUBA1A, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-207ENST00000550767 EYA1Q99502 592 aa16.14■□□□□ 0.17
TUBA1A-207ENST00000550767 SHANK3Q9BYB0 1731 aa16.14■□□□□ 0.17
TUBA1A-207ENST00000550767 COL3A1P02461 1466 aaPredicted RBP16.14■□□□□ 0.17
TUBA1A-207ENST00000550767 RAPGEF4Q8WZA2 1011 aa16.13■□□□□ 0.17
TUBA1A-207ENST00000550767 PKD1L3Q7Z443 1732 aa16.13■□□□□ 0.17
TUBA1A-207ENST00000550767 EXOC5O00471 708 aa16.13■□□□□ 0.17
TUBA1A-207ENST00000550767 RALBP1Q15311 655 aa16.13■□□□□ 0.17
TUBA1A-207ENST00000550767 CFAP53Q96M91 514 aa16.13■□□□□ 0.17
TUBA1A-207ENST00000550767 IGSF1Q8N6C5 1336 aa16.12■□□□□ 0.17
TUBA1A-207ENST00000550767 RREB1Q92766 1687 aa16.12■□□□□ 0.17
TUBA1A-207ENST00000550767 DIAPH1O60610 1272 aaKnown RBP16.12■□□□□ 0.17
TUBA1A-207ENST00000550767 LRP5O75197 1615 aa16.12■□□□□ 0.17
TUBA1A-207ENST00000550767 BCL9O00512 1426 aa16.11■□□□□ 0.17
TUBA1A-207ENST00000550767 TATP17735 454 aaPredicted RBP16.11■□□□□ 0.17
TUBA1A-207ENST00000550767 IL13P35225 146 aa16.11■□□□□ 0.17
TUBA1A-207ENST00000550767 R3HDM1Q15032 1099 aaKnown RBP16.11■□□□□ 0.17
TUBA1A-207ENST00000550767 MARCH10Q8NA82 808 aaPredicted RBP16.11■□□□□ 0.17
TUBA1A-207ENST00000550767 PLSCR1O15162 318 aa16.09■□□□□ 0.17
TUBA1A-207ENST00000550767 BCL11BQ9C0K0 894 aaPredicted RBP16.09■□□□□ 0.17
TUBA1A-207ENST00000550767 NUP188Q5SRE5 1749 aa16.09■□□□□ 0.17
TUBA1A-207ENST00000550767 RGPD3A6NKT7 1758 aaPredicted RBP16.09■□□□□ 0.17
TUBA1A-207ENST00000550767 RGPD4Q7Z3J3 1758 aa16.09■□□□□ 0.17
TUBA1A-207ENST00000550767 KAT6BQ8WYB5 2073 aa16.08■□□□□ 0.17
TUBA1A-207ENST00000550767 NBPF14Q5TI25 921 aa16.08■□□□□ 0.16
TUBA1A-207ENST00000550767 ZCRB1Q8TBF4 217 aaKnown RBP16.08■□□□□ 0.16
TUBA1A-207ENST00000550767 KDRP35968 1356 aa16.07■□□□□ 0.16
TUBA1A-207ENST00000550767 PLEKHG2Q9H7P9 1386 aa16.07■□□□□ 0.16
TUBA1A-207ENST00000550767 MYBBP1AQ9BQG0 1328 aaKnown RBP16.07■□□□□ 0.16
TUBA1A-207ENST00000550767 SULT6B1Q6IMI4 303 aa16.06■□□□□ 0.16
TUBA1A-207ENST00000550767 PRKRIP1Q9H875 184 aaPredicted RBP16.06■□□□□ 0.16
TUBA1A-207ENST00000550767 PCDH11XQ9BZA7 1347 aa16.05■□□□□ 0.16
TUBA1A-207ENST00000550767 PCDH11YQ9BZA8 1340 aa16.05■□□□□ 0.16
TUBA1A-207ENST00000550767 DOT1LQ8TEK3 1739 aa16.05■□□□□ 0.16
TUBA1A-207ENST00000550767 U2SURPO15042 1029 aaKnown RBP16.05■□□□□ 0.16
TUBA1A-207ENST00000550767 AEBP1Q8IUX7 1158 aa16.05■□□□□ 0.16
TUBA1A-207ENST00000550767 DDX54Q8TDD1 881 aaKnown RBP16.05■□□□□ 0.16
TUBA1A-207ENST00000550767 NUDCQ9Y266 331 aa16.05■□□□□ 0.16
TUBA1A-207ENST00000550767 NHSQ6T4R5 1651 aa16.05■□□□□ 0.16
TUBA1A-207ENST00000550767 PTF1AQ7RTS3 328 aa16.04■□□□□ 0.16
TUBA1A-207ENST00000550767 SPG7Q9UQ90 795 aa16.04■□□□□ 0.16
TUBA1A-207ENST00000550767 HMOX1P09601 288 aa16.03■□□□□ 0.16
TUBA1A-207ENST00000550767 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.03■□□□□ 0.16
TUBA1A-207ENST00000550767 ANP32CO43423 234 aa16■□□□□ 0.15
TUBA1A-207ENST00000550767 AMOTQ4VCS5 1084 aa16■□□□□ 0.15
TUBA1A-207ENST00000550767 TOGARAM1Q9Y4F4 1720 aa16■□□□□ 0.15
TUBA1A-207ENST00000550767 U2AF1L5P0DN76 240 aaPredicted RBP16■□□□□ 0.15
TUBA1A-207ENST00000550767 U2AF1Q01081 240 aaKnown RBP eCLIP16■□□□□ 0.15
TUBA1A-207ENST00000550767 PLEKHO1Q53GL0 409 aaPredicted RBP16■□□□□ 0.15
TUBA1A-207ENST00000550767 PROM2Q8N271 834 aa16■□□□□ 0.15
TUBA1A-207ENST00000550767 BTAF1O14981 1849 aa15.99■□□□□ 0.15
TUBA1A-207ENST00000550767 VIRMAQ69YN4 1812 aaKnown RBP15.99■□□□□ 0.15
TUBA1A-207ENST00000550767 ITGB4P16144 1822 aa15.99■□□□□ 0.15
TUBA1A-207ENST00000550767 CYP27B1O15528 508 aa15.99■□□□□ 0.15
TUBA1A-207ENST00000550767 KCNQ2O43526 872 aa15.99■□□□□ 0.15
TUBA1A-207ENST00000550767 IFNL2Q8IZJ0 200 aa15.98■□□□□ 0.15
TUBA1A-207ENST00000550767 ACSBG1Q96GR2 724 aa15.98■□□□□ 0.15
TUBA1A-207ENST00000550767 PHKG2P15735 406 aa15.97■□□□□ 0.15
TUBA1A-207ENST00000550767 TXNRD1Q16881 649 aa15.97■□□□□ 0.15
TUBA1A-207ENST00000550767 ZNF530Q6P9A1 599 aaPredicted RBP15.97■□□□□ 0.15
TUBA1A-207ENST00000550767 RSPH6AQ9H0K4 717 aa15.96■□□□□ 0.15
TUBA1A-207ENST00000550767 SCN11AQ9UI33 1791 aa15.95■□□□□ 0.14
TUBA1A-207ENST00000550767 PRKAR2BP31323 418 aa15.95■□□□□ 0.14
TUBA1A-207ENST00000550767 C1orf141Q5JVX7 400 aa15.95■□□□□ 0.14
TUBA1A-207ENST00000550767 SYTL4Q96C24 671 aaPredicted RBP15.95■□□□□ 0.14
TUBA1A-207ENST00000550767 ANO8Q9HCE9 1232 aaPredicted RBP15.95■□□□□ 0.14
TUBA1A-207ENST00000550767 FCHSD2O94868 740 aa15.94■□□□□ 0.14
TUBA1A-207ENST00000550767 HSP90AB1P08238 724 aaKnown RBP15.94■□□□□ 0.14
TUBA1A-207ENST00000550767 NKX1-1Q15270 411 aaPredicted RBP15.94■□□□□ 0.14
TUBA1A-207ENST00000550767 PRIM1P49642 420 aaKnown RBP15.93■□□□□ 0.14
TUBA1A-207ENST00000550767 SPON1Q9HCB6 807 aa15.93■□□□□ 0.14
TUBA1A-207ENST00000550767 WDR43Q15061 677 aaKnown RBP eCLIP15.92■□□□□ 0.14
TUBA1A-207ENST00000550767 MTHFSDQ2M296 383 aaKnown RBP15.92■□□□□ 0.14
TUBA1A-207ENST00000550767 CASZ1Q86V15 1759 aa15.91■□□□□ 0.14
TUBA1A-207ENST00000550767 NEFMP07197 916 aa15.91■□□□□ 0.14
TUBA1A-207ENST00000550767 SLC15A2Q16348 729 aa15.91■□□□□ 0.14
TUBA1A-207ENST00000550767 AKAP4Q5JQC9 854 aa15.91■□□□□ 0.14
TUBA1A-207ENST00000550767 GAS2L2Q8NHY3 880 aa15.91■□□□□ 0.14
TUBA1A-207ENST00000550767 DCAF5Q96JK2 942 aa15.91■□□□□ 0.14
TUBA1A-207ENST00000550767 STK32BQ9NY57 414 aa15.91■□□□□ 0.14
TUBA1A-207ENST00000550767 DLG5Q8TDM6 1919 aa15.91■□□□□ 0.14
TUBA1A-207ENST00000550767 KDM6AO15550 1401 aaPredicted RBP15.9■□□□□ 0.14
TUBA1A-207ENST00000550767 PNNQ9H307 717 aaKnown RBP15.9■□□□□ 0.14
TUBA1A-207ENST00000550767 ADAMTS7Q9UKP4 1686 aa15.9■□□□□ 0.14
TUBA1A-207ENST00000550767 LY75O60449 1722 aa15.89■□□□□ 0.13
TUBA1A-207ENST00000550767 PHACTR3Q96KR7 559 aa15.89■□□□□ 0.13
TUBA1A-207ENST00000550767 MAP3K5Q99683 1374 aa15.89■□□□□ 0.13
TUBA1A-207ENST00000550767 MPRIPQ6WCQ1 1025 aa15.88■□□□□ 0.13
TUBA1A-207ENST00000550767 MAPK8IP3Q9UPT6 1336 aa15.88■□□□□ 0.13
TUBA1A-207ENST00000550767 PDGFDQ9GZP0 370 aaPredicted RBP15.87■□□□□ 0.13
TUBA1A-207ENST00000550767 TMOD3Q9NYL9 352 aa15.87■□□□□ 0.13
TUBA1A-207ENST00000550767 PPP1R1BQ9UD71 204 aaPredicted RBP15.87■□□□□ 0.13
TUBA1A-207ENST00000550767 GNAT3A8MTJ3 354 aa15.87■□□□□ 0.13
TUBA1A-207ENST00000550767 ERVV-2B6SEH9 535 aa15.87■□□□□ 0.13
TUBA1A-207ENST00000550767 CCDC184Q52MB2 194 aa15.87■□□□□ 0.13
TUBA1A-207ENST00000550767 SLC27A3Q5K4L6 730 aa15.87■□□□□ 0.13
TUBA1A-207ENST00000550767 PLEKHF1Q96S99 279 aa15.87■□□□□ 0.13
TUBA1A-207ENST00000550767 MRS2Q9HD23 443 aa15.87■□□□□ 0.13
TUBA1A-207ENST00000550767 MRC1P22897 1456 aa15.86■□□□□ 0.13
TUBA1A-207ENST00000550767 PAPPAQ13219 1627 aa15.86■□□□□ 0.13
TUBA1A-207ENST00000550767 LRRC4BQ9NT99 713 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms