RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 CFAP53Q96M91 514 aa18.51■□□□□ 0.55
TROAP-213ENST00000550709 BAG6P46379 1132 aa18.5■□□□□ 0.55
TROAP-213ENST00000550709 U2SURPO15042 1029 aaKnown RBP18.49■□□□□ 0.55
TROAP-213ENST00000550709 KCNQ2O43526 872 aa18.49■□□□□ 0.55
TROAP-213ENST00000550709 HMOX1P09601 288 aa18.49■□□□□ 0.55
TROAP-213ENST00000550709 EN1Q05925 392 aaPredicted RBP18.49■□□□□ 0.55
TROAP-213ENST00000550709 FAM208AQ9UK61 1670 aaKnown RBP18.49■□□□□ 0.55
TROAP-213ENST00000550709 RGPD2P0DJD1 1756 aa18.48■□□□□ 0.55
TROAP-213ENST00000550709 PARD3Q8TEW0 1356 aa18.48■□□□□ 0.55
TROAP-213ENST00000550709 SPG7Q9UQ90 795 aa18.48■□□□□ 0.55
TROAP-213ENST00000550709 NCAPD2Q15021 1401 aa18.48■□□□□ 0.55
TROAP-213ENST00000550709 RALBP1Q15311 655 aa18.47■□□□□ 0.55
TROAP-213ENST00000550709 BCL11BQ9C0K0 894 aaPredicted RBP18.47■□□□□ 0.55
TROAP-213ENST00000550709 PCDH11XQ9BZA7 1347 aa18.47■□□□□ 0.55
TROAP-213ENST00000550709 PCDH11YQ9BZA8 1340 aa18.47■□□□□ 0.55
TROAP-213ENST00000550709 CYP27B1O15528 508 aa18.46■□□□□ 0.55
TROAP-213ENST00000550709 SYTL4Q96C24 671 aaPredicted RBP18.46■□□□□ 0.55
TROAP-213ENST00000550709 WNK3Q9BYP7 1800 aa18.44■□□□□ 0.54
TROAP-213ENST00000550709 BCL9O00512 1426 aa18.44■□□□□ 0.54
TROAP-213ENST00000550709 PRIM1P49642 420 aaKnown RBP18.44■□□□□ 0.54
TROAP-213ENST00000550709 PLEKHO1Q53GL0 409 aaPredicted RBP18.44■□□□□ 0.54
TROAP-213ENST00000550709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.44■□□□□ 0.54
TROAP-213ENST00000550709 EZH2Q15910 746 aaKnown RBP18.43■□□□□ 0.54
TROAP-213ENST00000550709 NUDCQ9Y266 331 aa18.43■□□□□ 0.54
TROAP-213ENST00000550709 COL3A1P02461 1466 aaPredicted RBP18.42■□□□□ 0.54
TROAP-213ENST00000550709 ZNF530Q6P9A1 599 aaPredicted RBP18.42■□□□□ 0.54
TROAP-213ENST00000550709 U2AF1L5P0DN76 240 aaPredicted RBP18.41■□□□□ 0.54
TROAP-213ENST00000550709 U2AF1Q01081 240 aaKnown RBP eCLIP18.41■□□□□ 0.54
TROAP-213ENST00000550709 AMOTQ4VCS5 1084 aa18.41■□□□□ 0.54
TROAP-213ENST00000550709 IFNL2Q8IZJ0 200 aa18.41■□□□□ 0.54
TROAP-213ENST00000550709 CAMKK2Q96RR4 588 aa18.41■□□□□ 0.54
TROAP-213ENST00000550709 KDRP35968 1356 aa18.41■□□□□ 0.54
TROAP-213ENST00000550709 PHKG2P15735 406 aa18.4■□□□□ 0.54
TROAP-213ENST00000550709 PRKRIP1Q9H875 184 aaPredicted RBP18.39■□□□□ 0.53
TROAP-213ENST00000550709 MYBBP1AQ9BQG0 1328 aaKnown RBP18.39■□□□□ 0.53
TROAP-213ENST00000550709 C1orf141Q5JVX7 400 aa18.38■□□□□ 0.53
TROAP-213ENST00000550709 NKX1-1Q15270 411 aaPredicted RBP18.37■□□□□ 0.53
TROAP-213ENST00000550709 MPRIPQ6WCQ1 1025 aa18.37■□□□□ 0.53
TROAP-213ENST00000550709 PLSCR1O15162 318 aa18.36■□□□□ 0.53
TROAP-213ENST00000550709 PRKAR2BP31323 418 aa18.36■□□□□ 0.53
TROAP-213ENST00000550709 MTHFSDQ2M296 383 aaKnown RBP18.35■□□□□ 0.53
TROAP-213ENST00000550709 RSPH6AQ9H0K4 717 aa18.35■□□□□ 0.53
TROAP-213ENST00000550709 PROM2Q8N271 834 aa18.34■□□□□ 0.53
TROAP-213ENST00000550709 RGPD1P0DJD0 1748 aa18.34■□□□□ 0.53
TROAP-213ENST00000550709 PLEKHG2Q9H7P9 1386 aa18.33■□□□□ 0.53
TROAP-213ENST00000550709 HSP90AB1P08238 724 aaKnown RBP18.33■□□□□ 0.52
TROAP-213ENST00000550709 TXNRD1Q16881 649 aa18.33■□□□□ 0.52
TROAP-213ENST00000550709 DCAF5Q96JK2 942 aa18.33■□□□□ 0.52
TROAP-213ENST00000550709 PHACTR3Q96KR7 559 aa18.33■□□□□ 0.52
TROAP-213ENST00000550709 FCHSD2O94868 740 aa18.32■□□□□ 0.52
TROAP-213ENST00000550709 PIGBQ92521 554 aa18.32■□□□□ 0.52
TROAP-213ENST00000550709 TMOD3Q9NYL9 352 aa18.32■□□□□ 0.52
TROAP-213ENST00000550709 TNS1Q9HBL0 1735 aaKnown RBP18.32■□□□□ 0.52
TROAP-213ENST00000550709 ANP32CO43423 234 aa18.31■□□□□ 0.52
TROAP-213ENST00000550709 AKAP4Q5JQC9 854 aa18.31■□□□□ 0.52
TROAP-213ENST00000550709 SHANK3Q9BYB0 1731 aa18.3■□□□□ 0.52
TROAP-213ENST00000550709 PSDA5PKW4 1024 aaPredicted RBP18.3■□□□□ 0.52
TROAP-213ENST00000550709 KCNQ4P56696 695 aa18.3■□□□□ 0.52
TROAP-213ENST00000550709 CABP4P57796 275 aa18.3■□□□□ 0.52
TROAP-213ENST00000550709 PKD1L3Q7Z443 1732 aa18.29■□□□□ 0.52
TROAP-213ENST00000550709 KAT6BQ8WYB5 2073 aa18.29■□□□□ 0.52
TROAP-213ENST00000550709 ERVV-2B6SEH9 535 aa18.29■□□□□ 0.52
TROAP-213ENST00000550709 R3HDM1Q15032 1099 aaKnown RBP18.29■□□□□ 0.52
TROAP-213ENST00000550709 GAS2L2Q8NHY3 880 aa18.29■□□□□ 0.52
TROAP-213ENST00000550709 LGR6Q9HBX8 967 aa18.29■□□□□ 0.52
TROAP-213ENST00000550709 NBPF14Q5TI25 921 aa18.28■□□□□ 0.52
TROAP-213ENST00000550709 NHSQ6T4R5 1651 aa18.28■□□□□ 0.52
TROAP-213ENST00000550709 KDM6AO15550 1401 aaPredicted RBP18.27■□□□□ 0.52
TROAP-213ENST00000550709 LRRC4BQ9NT99 713 aa18.27■□□□□ 0.52
TROAP-213ENST00000550709 ASAP1Q9ULH1 1129 aa18.27■□□□□ 0.52
TROAP-213ENST00000550709 SBF2Q86WG5 1849 aa18.27■□□□□ 0.52
TROAP-213ENST00000550709 RNMTO43148 476 aaKnown RBP18.26■□□□□ 0.51
TROAP-213ENST00000550709 NEFMP07197 916 aa18.26■□□□□ 0.51
TROAP-213ENST00000550709 WDR43Q15061 677 aaKnown RBP eCLIP18.26■□□□□ 0.51
TROAP-213ENST00000550709 NFATC2IPQ8NCF5 419 aa18.26■□□□□ 0.51
TROAP-213ENST00000550709 GNAT3A8MTJ3 354 aa18.25■□□□□ 0.51
TROAP-213ENST00000550709 SMARCC1Q92922 1105 aaPredicted RBP18.25■□□□□ 0.51
TROAP-213ENST00000550709 ANO8Q9HCE9 1232 aaPredicted RBP18.25■□□□□ 0.51
TROAP-213ENST00000550709 CCNL1Q9UK58 526 aaPredicted RBP18.25■□□□□ 0.51
TROAP-213ENST00000550709 PALLDQ8WX93 1383 aa18.25■□□□□ 0.51
TROAP-213ENST00000550709 DOT1LQ8TEK3 1739 aa18.24■□□□□ 0.51
TROAP-213ENST00000550709 CCDC184Q52MB2 194 aa18.24■□□□□ 0.51
TROAP-213ENST00000550709 SLC27A3Q5K4L6 730 aa18.24■□□□□ 0.51
TROAP-213ENST00000550709 ATG3Q9NT62 314 aa18.24■□□□□ 0.51
TROAP-213ENST00000550709 MAP3K5Q99683 1374 aa18.23■□□□□ 0.51
TROAP-213ENST00000550709 PLEKHF1Q96S99 279 aa18.23■□□□□ 0.51
TROAP-213ENST00000550709 PNNQ9H307 717 aaKnown RBP18.23■□□□□ 0.51
TROAP-213ENST00000550709 MAPK8IP3Q9UPT6 1336 aa18.23■□□□□ 0.51
TROAP-213ENST00000550709 CCDC146Q8IYE0 955 aa18.22■□□□□ 0.51
TROAP-213ENST00000550709 IL17REQ8NFR9 667 aa18.22■□□□□ 0.51
TROAP-213ENST00000550709 SLC52A2Q9HAB3 445 aa18.22■□□□□ 0.51
TROAP-213ENST00000550709 STK32BQ9NY57 414 aa18.22■□□□□ 0.51
TROAP-213ENST00000550709 ADAMTS8Q9UP79 889 aa18.22■□□□□ 0.51
TROAP-213ENST00000550709 BTAF1O14981 1849 aa18.21■□□□□ 0.51
TROAP-213ENST00000550709 LOC102724428A0A0B4J2F2 783 aa18.2■□□□□ 0.5
TROAP-213ENST00000550709 SIK1P57059 783 aa18.2■□□□□ 0.5
TROAP-213ENST00000550709 DCTN1Q14203 1278 aa18.2■□□□□ 0.5
TROAP-213ENST00000550709 RTF1Q92541 710 aaKnown RBP18.2■□□□□ 0.5
TROAP-213ENST00000550709 RBM42Q9BTD8 480 aaKnown RBP18.2■□□□□ 0.5
TROAP-213ENST00000550709 TOGARAM1Q9Y4F4 1720 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms