RNA–Protein interactions for RNA: ENST00000550651.5

RACGAP1-220, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-220ENST00000550651 POLD1P28340 1107 aa22.79■■□□□ 1.24
RACGAP1-220ENST00000550651 KCNQ4P56696 695 aa22.79■■□□□ 1.24
RACGAP1-220ENST00000550651 ZCRB1Q8TBF4 217 aaKnown RBP22.79■■□□□ 1.24
RACGAP1-220ENST00000550651 TFCP2L1Q9NZI6 479 aa22.79■■□□□ 1.24
RACGAP1-220ENST00000550651 DOT1LQ8TEK3 1739 aa22.79■■□□□ 1.24
RACGAP1-220ENST00000550651 LY75O60449 1722 aa22.78■■□□□ 1.24
RACGAP1-220ENST00000550651 SHANK3Q9BYB0 1731 aa22.78■■□□□ 1.24
RACGAP1-220ENST00000550651 MEGF6O75095 1541 aa22.77■■□□□ 1.24
RACGAP1-220ENST00000550651 RGPD2P0DJD1 1756 aa22.77■■□□□ 1.24
RACGAP1-220ENST00000550651 SLC24A1O60721 1099 aa22.77■■□□□ 1.24
RACGAP1-220ENST00000550651 GPR162Q16538 588 aa22.77■■□□□ 1.24
RACGAP1-220ENST00000550651 TUBGCP6Q96RT7 1819 aa22.77■■□□□ 1.24
RACGAP1-220ENST00000550651 RTL1A6NKG5 1358 aa22.76■■□□□ 1.23
RACGAP1-220ENST00000550651 KLHL34Q8N239 644 aa22.75■■□□□ 1.23
RACGAP1-220ENST00000550651 NBPF6Q5VWK0 638 aa22.74■■□□□ 1.23
RACGAP1-220ENST00000550651 NBPF4Q96M43 638 aa22.74■■□□□ 1.23
RACGAP1-220ENST00000550651 CCNL1Q9UK58 526 aaPredicted RBP22.73■■□□□ 1.23
RACGAP1-220ENST00000550651 C1QTNF8P60827 252 aa22.72■■□□□ 1.23
RACGAP1-220ENST00000550651 RRS1Q15050 365 aaKnown RBP22.72■■□□□ 1.23
RACGAP1-220ENST00000550651 CGNL1Q0VF96 1302 aa22.72■■□□□ 1.23
RACGAP1-220ENST00000550651 FYB1O15117 783 aa22.71■■□□□ 1.23
RACGAP1-220ENST00000550651 NLGN2Q8NFZ4 835 aa22.7■■□□□ 1.22
RACGAP1-220ENST00000550651 USP47Q96K76 1375 aa22.7■■□□□ 1.22
RACGAP1-220ENST00000550651 USHBP1Q8N6Y0 703 aa22.69■■□□□ 1.22
RACGAP1-220ENST00000550651 GGNBP2Q9H3C7 697 aa22.69■■□□□ 1.22
RACGAP1-220ENST00000550651 COL23A1Q86Y22 540 aaPredicted RBP22.68■■□□□ 1.22
RACGAP1-220ENST00000550651 PELP1Q8IZL8 1130 aaKnown RBP22.68■■□□□ 1.22
RACGAP1-220ENST00000550651 SMG6Q86US8 1419 aaKnown RBP22.67■■□□□ 1.22
RACGAP1-220ENST00000550651 SENP3-EIF4A1A0A087X0R7 540 aa22.67■■□□□ 1.22
RACGAP1-220ENST00000550651 RAPGEF4Q8WZA2 1011 aa22.67■■□□□ 1.22
RACGAP1-220ENST00000550651 GOLGB1Q14789 3259 aaKnown RBP22.66■■□□□ 1.22
RACGAP1-220ENST00000550651 MSH5O43196 834 aa22.65■■□□□ 1.22
RACGAP1-220ENST00000550651 TATP17735 454 aaPredicted RBP22.65■■□□□ 1.22
RACGAP1-220ENST00000550651 TMF1P82094 1093 aa22.65■■□□□ 1.22
RACGAP1-220ENST00000550651 INSRP06213 1382 aa22.64■■□□□ 1.22
RACGAP1-220ENST00000550651 HSP90AB2PQ58FF8 381 aa22.64■■□□□ 1.21
RACGAP1-220ENST00000550651 PCDH11XQ9BZA7 1347 aa22.63■■□□□ 1.21
RACGAP1-220ENST00000550651 PCDH11YQ9BZA8 1340 aa22.63■■□□□ 1.21
RACGAP1-220ENST00000550651 KIF24Q5T7B8 1368 aa22.63■■□□□ 1.21
RACGAP1-220ENST00000550651 C5P01031 1676 aa22.62■■□□□ 1.21
RACGAP1-220ENST00000550651 GRIN3BO60391 1043 aa22.62■■□□□ 1.21
RACGAP1-220ENST00000550651 YBX3P16989 372 aaKnown RBP eCLIP22.62■■□□□ 1.21
RACGAP1-220ENST00000550651 FLT4P35916 1363 aa22.62■■□□□ 1.21
RACGAP1-220ENST00000550651 HMGB2P26583 209 aaKnown RBP22.61■■□□□ 1.21
RACGAP1-220ENST00000550651 GIGYF1O75420 1035 aaPredicted RBP22.6■■□□□ 1.21
RACGAP1-220ENST00000550651 MSL1Q68DK7 614 aa22.6■■□□□ 1.21
RACGAP1-220ENST00000550651 PALLDQ8WX93 1383 aa22.6■■□□□ 1.21
RACGAP1-220ENST00000550651 KIF20BQ96Q89 1820 aa22.59■■□□□ 1.21
RACGAP1-220ENST00000550651 CYP27B1O15528 508 aa22.59■■□□□ 1.21
RACGAP1-220ENST00000550651 MPRIPQ6WCQ1 1025 aa22.59■■□□□ 1.21
RACGAP1-220ENST00000550651 FLAD1Q8NFF5 587 aa22.59■■□□□ 1.21
RACGAP1-220ENST00000550651 TAF1LQ8IZX4 1826 aa22.57■■□□□ 1.2
RACGAP1-220ENST00000550651 CD2APQ9Y5K6 639 aa22.57■■□□□ 1.2
RACGAP1-220ENST00000550651 CDCA8Q53HL2 280 aa22.56■■□□□ 1.2
RACGAP1-220ENST00000550651 TOGARAM1Q9Y4F4 1720 aa22.55■■□□□ 1.2
RACGAP1-220ENST00000550651 SMARCC1Q92922 1105 aaPredicted RBP22.54■■□□□ 1.2
RACGAP1-220ENST00000550651 CARD14Q9BXL6 1004 aa22.54■■□□□ 1.2
RACGAP1-220ENST00000550651 EMILIN1Q9Y6C2 1016 aa22.54■■□□□ 1.2
RACGAP1-220ENST00000550651 C4BP0C0L5 1744 aa22.54■■□□□ 1.2
RACGAP1-220ENST00000550651 PKD1L3Q7Z443 1732 aa22.54■■□□□ 1.2
RACGAP1-220ENST00000550651 ITGB4P16144 1822 aa22.53■■□□□ 1.2
RACGAP1-220ENST00000550651 NCAPD2Q15021 1401 aa22.53■■□□□ 1.2
RACGAP1-220ENST00000550651 NKX1-1Q15270 411 aaPredicted RBP22.52■■□□□ 1.2
RACGAP1-220ENST00000550651 AMIGO3Q86WK7 504 aa22.51■■□□□ 1.19
RACGAP1-220ENST00000550651 PIGBQ92521 554 aa22.51■■□□□ 1.19
RACGAP1-220ENST00000550651 AK7Q96M32 723 aa22.51■■□□□ 1.19
RACGAP1-220ENST00000550651 NSD3Q9BZ95 1437 aa22.49■■□□□ 1.19
RACGAP1-220ENST00000550651 ATP10DQ9P241 1426 aa22.48■■□□□ 1.19
RACGAP1-220ENST00000550651 UBR3Q6ZT12 1888 aa22.48■■□□□ 1.19
RACGAP1-220ENST00000550651 SPG7Q9UQ90 795 aa22.48■■□□□ 1.19
RACGAP1-220ENST00000550651 ANKRD26Q9UPS8 1709 aa22.48■■□□□ 1.19
RACGAP1-220ENST00000550651 PPM1GO15355 546 aaPredicted RBP22.47■■□□□ 1.19
RACGAP1-220ENST00000550651 WASHC2AQ641Q2 1341 aa22.47■■□□□ 1.19
RACGAP1-220ENST00000550651 MAP2P11137 1827 aaKnown RBP22.47■■□□□ 1.19
RACGAP1-220ENST00000550651 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.46■■□□□ 1.19
RACGAP1-220ENST00000550651 PHF14O94880 888 aa22.46■■□□□ 1.19
RACGAP1-220ENST00000550651 SMIM5Q71RC9 77 aa22.46■■□□□ 1.19
RACGAP1-220ENST00000550651 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.46■■□□□ 1.199e-7■■□□□ 14.2
RACGAP1-220ENST00000550651 LOC102724428A0A0B4J2F2 783 aa22.45■■□□□ 1.18
RACGAP1-220ENST00000550651 SSFA2P28290 1259 aa22.45■■□□□ 1.18
RACGAP1-220ENST00000550651 SIK1P57059 783 aa22.45■■□□□ 1.18
RACGAP1-220ENST00000550651 EYA1Q99502 592 aa22.45■■□□□ 1.18
RACGAP1-220ENST00000550651 LINC00116Q8NCU8 138 aa22.44■■□□□ 1.18
RACGAP1-220ENST00000550651 ADCY9O60503 1353 aa22.43■■□□□ 1.18
RACGAP1-220ENST00000550651 TMOD3Q9NYL9 352 aa22.43■■□□□ 1.18
RACGAP1-220ENST00000550651 IGSF1Q8N6C5 1336 aa22.42■■□□□ 1.18
RACGAP1-220ENST00000550651 PHKG2P15735 406 aa22.41■■□□□ 1.18
RACGAP1-220ENST00000550651 IFNL2Q8IZJ0 200 aa22.41■■□□□ 1.18
RACGAP1-220ENST00000550651 GPBP1L1Q9HC44 474 aaPredicted RBP22.41■■□□□ 1.18
RACGAP1-220ENST00000550651 POLKQ9UBT6 870 aa22.41■■□□□ 1.18
RACGAP1-220ENST00000550651 ASAP1Q9ULH1 1129 aa22.41■■□□□ 1.18
RACGAP1-220ENST00000550651 ITPK1Q13572 414 aa22.4■■□□□ 1.18
RACGAP1-220ENST00000550651 CEP350Q5VT06 3117 aa22.4■■□□□ 1.18
RACGAP1-220ENST00000550651 ATP6V1AP38606 617 aa22.39■■□□□ 1.17
RACGAP1-220ENST00000550651 GNPATO15228 680 aa22.38■■□□□ 1.17
RACGAP1-220ENST00000550651 ATG3Q9NT62 314 aa22.37■■□□□ 1.17
RACGAP1-220ENST00000550651 PLEKHG2Q9H7P9 1386 aa22.37■■□□□ 1.17
RACGAP1-220ENST00000550651 WWC3Q9ULE0 1092 aa22.36■■□□□ 1.17
RACGAP1-220ENST00000550651 EIF4A2Q14240 407 aaKnown RBP22.35■■□□□ 1.17
RACGAP1-220ENST00000550651 ZNF526Q8TF50 670 aaPredicted RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms