RNA–Protein interactions for RNA: ENST00000550636.1

LINC02396-202, Transcript of long intergenic non-protein coding RNA 2396, humanhuman

TSL 2 BASIC

Gene LINC02396, Length 2,324 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02396-202ENST00000550636 TCERG1O14776 1098 aaKnown RBP18.62■□□□□ 0.57
LINC02396-202ENST00000550636 MVPQ14764 893 aaKnown RBP18.62■□□□□ 0.57
LINC02396-202ENST00000550636 NBPF6Q5VWK0 638 aa18.61■□□□□ 0.57
LINC02396-202ENST00000550636 NBPF4Q96M43 638 aa18.61■□□□□ 0.57
LINC02396-202ENST00000550636 BRPF1P55201 1214 aaPredicted RBP18.61■□□□□ 0.57
LINC02396-202ENST00000550636 USP19O94966 1318 aa18.61■□□□□ 0.57
LINC02396-202ENST00000550636 KIF1AQ12756 1690 aa18.6■□□□□ 0.57
LINC02396-202ENST00000550636 NPHP3Q7Z494 1330 aa18.59■□□□□ 0.57
LINC02396-202ENST00000550636 GNAT3A8MTJ3 354 aa18.59■□□□□ 0.57
LINC02396-202ENST00000550636 HTATSF1O43719 755 aaKnown RBP18.59■□□□□ 0.57
LINC02396-202ENST00000550636 IGHDP01880 384 aa18.59■□□□□ 0.57
LINC02396-202ENST00000550636 MRPL50Q8N5N7 158 aaKnown RBP18.59■□□□□ 0.57
LINC02396-202ENST00000550636 SKAP1Q86WV1 359 aa18.58■□□□□ 0.57
LINC02396-202ENST00000550636 LTN1O94822 1766 aa18.58■□□□□ 0.57
LINC02396-202ENST00000550636 ZNF335Q9H4Z2 1342 aaPredicted RBP18.58■□□□□ 0.56
LINC02396-202ENST00000550636 LRRC59Q96AG4 307 aaKnown RBP18.58■□□□□ 0.56
LINC02396-202ENST00000550636 MIS18AQ9NYP9 233 aa18.58■□□□□ 0.56
LINC02396-202ENST00000550636 CRB1P82279 1406 aa18.58■□□□□ 0.56
LINC02396-202ENST00000550636 ITPRIPQ8IWB1 547 aa18.57■□□□□ 0.56
LINC02396-202ENST00000550636 SLIT3O75094 1523 aa18.57■□□□□ 0.56
LINC02396-202ENST00000550636 ZC3H6P61129 1189 aaKnown RBP18.57■□□□□ 0.56
LINC02396-202ENST00000550636 NOP58Q9Y2X3 529 aaKnown RBP18.57■□□□□ 0.56
LINC02396-202ENST00000550636 STRCQ7RTU9 1775 aa18.57■□□□□ 0.56
LINC02396-202ENST00000550636 TRPM3Q9HCF6 1732 aaPredicted RBP18.56■□□□□ 0.56
LINC02396-202ENST00000550636 DDX19BQ9UMR2 479 aa18.56■□□□□ 0.56
LINC02396-202ENST00000550636 PCDHB15Q9Y5E8 787 aa18.56■□□□□ 0.56
LINC02396-202ENST00000550636 HAP1P54257 671 aaPredicted RBP18.56■□□□□ 0.56
LINC02396-202ENST00000550636 KRT24Q2M2I5 525 aa18.56■□□□□ 0.56
LINC02396-202ENST00000550636 TMEM57Q8N5G2 664 aa18.56■□□□□ 0.56
LINC02396-202ENST00000550636 ANKRD24Q8TF21 1146 aa18.56■□□□□ 0.56
LINC02396-202ENST00000550636 TSPYL4Q9UJ04 414 aa18.56■□□□□ 0.56
LINC02396-202ENST00000550636 AXIN2Q9Y2T1 843 aa18.56■□□□□ 0.56
LINC02396-202ENST00000550636 ARHGAP45Q92619 1136 aa18.55■□□□□ 0.56
LINC02396-202ENST00000550636 IL17REQ8NFR9 667 aa18.54■□□□□ 0.56
LINC02396-202ENST00000550636 BRINP3Q76B58 766 aa18.53■□□□□ 0.56
LINC02396-202ENST00000550636 KIAA0232Q92628 1395 aa18.53■□□□□ 0.56
LINC02396-202ENST00000550636 MAP3K5Q99683 1374 aa18.52■□□□□ 0.56
LINC02396-202ENST00000550636 CABLES1Q8TDN4 633 aa18.52■□□□□ 0.56
LINC02396-202ENST00000550636 SLAIN2Q9P270 581 aa18.52■□□□□ 0.56
LINC02396-202ENST00000550636 RWDD1Q9H446 243 aaPredicted RBP18.51■□□□□ 0.55
LINC02396-202ENST00000550636 SPATA31A3Q5VYP0 1347 aa18.51■□□□□ 0.55
LINC02396-202ENST00000550636 PHRF1Q9P1Y6 1649 aaKnown RBP18.51■□□□□ 0.55
LINC02396-202ENST00000550636 PLEKHO1Q53GL0 409 aaPredicted RBP18.5■□□□□ 0.55
LINC02396-202ENST00000550636 ALS2Q96Q42 1657 aa18.49■□□□□ 0.55
LINC02396-202ENST00000550636 TAF7Q15545 349 aaPredicted RBP18.49■□□□□ 0.55
LINC02396-202ENST00000550636 TNS3Q68CZ2 1445 aa18.49■□□□□ 0.55
LINC02396-202ENST00000550636 PDE4AP27815 886 aa18.49■□□□□ 0.55
LINC02396-202ENST00000550636 API5Q9BZZ5 524 aaKnown RBP18.49■□□□□ 0.55
LINC02396-202ENST00000550636 MED1Q15648 1581 aaPredicted RBP18.49■□□□□ 0.55
LINC02396-202ENST00000550636 RGS3P49796 1198 aa18.48■□□□□ 0.55
LINC02396-202ENST00000550636 ZBTB40Q9NUA8 1239 aa18.48■□□□□ 0.55
LINC02396-202ENST00000550636 AMOTQ4VCS5 1084 aa18.48■□□□□ 0.55
LINC02396-202ENST00000550636 XIRP1Q702N8 1843 aaKnown RBP18.47■□□□□ 0.55
LINC02396-202ENST00000550636 ERBB3P21860 1342 aa18.47■□□□□ 0.55
LINC02396-202ENST00000550636 PXDNQ92626 1479 aa18.47■□□□□ 0.55
LINC02396-202ENST00000550636 ZNF530Q6P9A1 599 aaPredicted RBP18.46■□□□□ 0.55
LINC02396-202ENST00000550636 AKAP4Q5JQC9 854 aa18.46■□□□□ 0.55
LINC02396-202ENST00000550636 BABAM1Q9NWV8 329 aa18.46■□□□□ 0.55
LINC02396-202ENST00000550636 CHMP4BQ9H444 224 aaKnown RBP18.45■□□□□ 0.54
LINC02396-202ENST00000550636 LGR6Q9HBX8 967 aa18.45■□□□□ 0.54
LINC02396-202ENST00000550636 ABCC4O15439 1325 aa18.45■□□□□ 0.54
LINC02396-202ENST00000550636 ZBTB7BO15156 539 aaPredicted RBP18.45■□□□□ 0.54
LINC02396-202ENST00000550636 SLC4A2P04920 1241 aa18.45■□□□□ 0.54
LINC02396-202ENST00000550636 BACH2Q9BYV9 841 aa18.45■□□□□ 0.54
LINC02396-202ENST00000550636 NLRP2Q9NX02 1062 aa18.45■□□□□ 0.54
LINC02396-202ENST00000550636 CHRNA2Q15822 529 aa18.44■□□□□ 0.54
LINC02396-202ENST00000550636 C1orf141Q5JVX7 400 aa18.44■□□□□ 0.54
LINC02396-202ENST00000550636 RGPD2P0DJD1 1756 aa18.44■□□□□ 0.54
LINC02396-202ENST00000550636 NCAPD2Q15021 1401 aa18.43■□□□□ 0.54
LINC02396-202ENST00000550636 CEMIPQ8WUJ3 1361 aa18.43■□□□□ 0.54
LINC02396-202ENST00000550636 CSB-PGBD3P0DP91 1061 aa18.43■□□□□ 0.54
LINC02396-202ENST00000550636 HDAC1Q13547 482 aaPredicted RBP18.43■□□□□ 0.54
LINC02396-202ENST00000550636 MPRIPQ6WCQ1 1025 aa18.43■□□□□ 0.54
LINC02396-202ENST00000550636 SOS2Q07890 1332 aaPredicted RBP18.42■□□□□ 0.54
LINC02396-202ENST00000550636 IPO9Q96P70 1041 aaKnown RBP18.41■□□□□ 0.54
LINC02396-202ENST00000550636 TEFQ10587 303 aa18.41■□□□□ 0.54
LINC02396-202ENST00000550636 RAPGEF4Q8WZA2 1011 aa18.41■□□□□ 0.54
LINC02396-202ENST00000550636 PTPRCP08575 1304 aa18.41■□□□□ 0.54
LINC02396-202ENST00000550636 PDZRN3Q9UPQ7 1066 aa18.4■□□□□ 0.54
LINC02396-202ENST00000550636 STK31Q9BXU1 1019 aa18.4■□□□□ 0.54
LINC02396-202ENST00000550636 ANP32AP39687 249 aaKnown RBP18.39■□□□□ 0.53
LINC02396-202ENST00000550636 CCDC30Q5VVM6 783 aa18.39■□□□□ 0.53
LINC02396-202ENST00000550636 LRRC37A3O60309 1634 aa18.39■□□□□ 0.53
LINC02396-202ENST00000550636 RNMTO43148 476 aaKnown RBP18.39■□□□□ 0.53
LINC02396-202ENST00000550636 INTS3Q68E01 1043 aaKnown RBP18.38■□□□□ 0.53
LINC02396-202ENST00000550636 NECTIN2Q92692 538 aa18.38■□□□□ 0.53
LINC02396-202ENST00000550636 SOS1Q07889 1333 aaPredicted RBP18.38■□□□□ 0.53
LINC02396-202ENST00000550636 CPDO75976 1380 aa18.38■□□□□ 0.53
LINC02396-202ENST00000550636 G2E3Q7L622 706 aa18.38■□□□□ 0.53
LINC02396-202ENST00000550636 RGPD5Q99666 1765 aa18.37■□□□□ 0.53
LINC02396-202ENST00000550636 BTBD11A6QL63 1104 aa18.37■□□□□ 0.53
LINC02396-202ENST00000550636 TATP17735 454 aaPredicted RBP18.37■□□□□ 0.53
LINC02396-202ENST00000550636 C1orf115Q9H7X2 142 aa18.37■□□□□ 0.53
LINC02396-202ENST00000550636 FAM161AQ3B820 660 aa18.37■□□□□ 0.53
LINC02396-202ENST00000550636 PRDM11Q9NQV5 511 aa18.36■□□□□ 0.53
LINC02396-202ENST00000550636 EIF4A1P60842 406 aaKnown RBP18.35■□□□□ 0.53
LINC02396-202ENST00000550636 RTL5Q5HYW3 569 aaPredicted RBP18.35■□□□□ 0.53
LINC02396-202ENST00000550636 RGS12O14924 1447 aa18.35■□□□□ 0.53
LINC02396-202ENST00000550636 KCNQ3O43525 872 aa18.34■□□□□ 0.53
LINC02396-202ENST00000550636 SMC5Q8IY18 1101 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms