RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 VSIG10Q8N0Z9 540 aa18.43■□□□□ 0.54
PDE1B-207ENST00000550620 NOL7Q9UMY1 257 aaKnown RBP18.43■□□□□ 0.54
PDE1B-207ENST00000550620 PTPRCP08575 1304 aa18.43■□□□□ 0.54
PDE1B-207ENST00000550620 PDLIM2Q96JY6 352 aa18.42■□□□□ 0.54
PDE1B-207ENST00000550620 ERC2O15083 957 aa18.42■□□□□ 0.54
PDE1B-207ENST00000550620 PRPF40AO75400 957 aaKnown RBP18.42■□□□□ 0.54
PDE1B-207ENST00000550620 COG3Q96JB2 828 aa18.42■□□□□ 0.54
PDE1B-207ENST00000550620 STAG3Q9UJ98 1225 aa18.42■□□□□ 0.54
PDE1B-207ENST00000550620 RBSNQ9H1K0 784 aa18.41■□□□□ 0.54
PDE1B-207ENST00000550620 MAP2P11137 1827 aaKnown RBP18.41■□□□□ 0.54
PDE1B-207ENST00000550620 ZNF500O60304 480 aaPredicted RBP18.41■□□□□ 0.54
PDE1B-207ENST00000550620 HMMRO75330 724 aa18.41■□□□□ 0.54
PDE1B-207ENST00000550620 PKP1Q13835 747 aa18.41■□□□□ 0.54
PDE1B-207ENST00000550620 RTL1A6NKG5 1358 aa18.41■□□□□ 0.54
PDE1B-207ENST00000550620 FAM83GA6ND36 823 aa18.4■□□□□ 0.54
PDE1B-207ENST00000550620 NME9Q86XW9 330 aa18.4■□□□□ 0.54
PDE1B-207ENST00000550620 ZGPATQ8N5A5 531 aaKnown RBP18.4■□□□□ 0.54
PDE1B-207ENST00000550620 RGS12O14924 1447 aa18.4■□□□□ 0.54
PDE1B-207ENST00000550620 MBD3O95983 291 aa18.4■□□□□ 0.54
PDE1B-207ENST00000550620 PRIM1P49642 420 aaKnown RBP18.4■□□□□ 0.54
PDE1B-207ENST00000550620 MCM2P49736 904 aa18.4■□□□□ 0.54
PDE1B-207ENST00000550620 LRSAM1Q6UWE0 723 aa18.4■□□□□ 0.54
PDE1B-207ENST00000550620 OTUD7AQ8TE49 926 aaPredicted RBP18.4■□□□□ 0.54
PDE1B-207ENST00000550620 KIAA0232Q92628 1395 aa18.39■□□□□ 0.54
PDE1B-207ENST00000550620 MCM5P33992 734 aa18.39■□□□□ 0.53
PDE1B-207ENST00000550620 GPT2Q8TD30 523 aa18.39■□□□□ 0.53
PDE1B-207ENST00000550620 MSH6P52701 1360 aa18.39■□□□□ 0.53
PDE1B-207ENST00000550620 WAPLQ7Z5K2 1190 aa18.38■□□□□ 0.53
PDE1B-207ENST00000550620 DCTN1Q14203 1278 aa18.38■□□□□ 0.53
PDE1B-207ENST00000550620 CSPP1Q1MSJ5 1256 aa18.37■□□□□ 0.53
PDE1B-207ENST00000550620 OSBPL3Q9H4L5 887 aa18.37■□□□□ 0.53
PDE1B-207ENST00000550620 ZDHHC9Q9Y397 364 aa18.37■□□□□ 0.53
PDE1B-207ENST00000550620 WASLO00401 505 aaPredicted RBP18.37■□□□□ 0.53
PDE1B-207ENST00000550620 SMARCA5O60264 1052 aaPredicted RBP18.37■□□□□ 0.53
PDE1B-207ENST00000550620 PKNOX2Q96KN3 472 aa18.36■□□□□ 0.53
PDE1B-207ENST00000550620 CHL1O00533 1208 aa18.35■□□□□ 0.53
PDE1B-207ENST00000550620 MCCP23508 829 aa18.35■□□□□ 0.53
PDE1B-207ENST00000550620 RRS1Q15050 365 aaKnown RBP18.35■□□□□ 0.53
PDE1B-207ENST00000550620 CCDC39Q9UFE4 941 aa18.35■□□□□ 0.53
PDE1B-207ENST00000550620 ZKSCAN5Q9Y2L8 839 aa18.35■□□□□ 0.53
PDE1B-207ENST00000550620 DLG5Q8TDM6 1919 aa18.35■□□□□ 0.53
PDE1B-207ENST00000550620 APBB1O00213 710 aa18.35■□□□□ 0.53
PDE1B-207ENST00000550620 MAP7D2Q96T17 732 aa18.35■□□□□ 0.53
PDE1B-207ENST00000550620 MEIS3Q99687 375 aa18.35■□□□□ 0.53
PDE1B-207ENST00000550620 RBM27Q9P2N5 1060 aaKnown RBP18.35■□□□□ 0.53
PDE1B-207ENST00000550620 RICTORQ6R327 1708 aa18.35■□□□□ 0.53
PDE1B-207ENST00000550620 ZMYND15Q9H091 742 aa18.34■□□□□ 0.53
PDE1B-207ENST00000550620 FBXO31Q5XUX0 539 aaPredicted RBP18.34■□□□□ 0.53
PDE1B-207ENST00000550620 TMEM63CQ9P1W3 806 aa18.34■□□□□ 0.53
PDE1B-207ENST00000550620 SYAP1Q96A49 352 aaPredicted RBP18.33■□□□□ 0.52
PDE1B-207ENST00000550620 ZRANB1Q9UGI0 708 aa18.33■□□□□ 0.52
PDE1B-207ENST00000550620 R3HCC1Q9Y3T6 440 aaKnown RBP18.33■□□□□ 0.52
PDE1B-207ENST00000550620 SYCE3A1L190 88 aa18.32■□□□□ 0.52
PDE1B-207ENST00000550620 NEK4P51957 841 aa18.32■□□□□ 0.52
PDE1B-207ENST00000550620 PDE1AP54750 535 aa18.32■□□□□ 0.52
PDE1B-207ENST00000550620 TMX3Q96JJ7 454 aa18.32■□□□□ 0.52
PDE1B-207ENST00000550620 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.32■□□□□ 0.52
PDE1B-207ENST00000550620 NRKQ7Z2Y5 1582 aa18.32■□□□□ 0.52
PDE1B-207ENST00000550620 RIMBP3CA6NJZ7 1639 aa18.32■□□□□ 0.52
PDE1B-207ENST00000550620 RIMBP3BA6NNM3 1639 aa18.32■□□□□ 0.52
PDE1B-207ENST00000550620 RIMBP3Q9UFD9 1639 aa18.32■□□□□ 0.52
PDE1B-207ENST00000550620 BRD1O95696 1058 aa18.31■□□□□ 0.52
PDE1B-207ENST00000550620 CCT4P50991 539 aaKnown RBP18.31■□□□□ 0.52
PDE1B-207ENST00000550620 INTS4Q96HW7 963 aaKnown RBP18.31■□□□□ 0.52
PDE1B-207ENST00000550620 ANAPC15P60006 121 aa18.31■□□□□ 0.52
PDE1B-207ENST00000550620 CUL4AQ13619 759 aa18.31■□□□□ 0.52
PDE1B-207ENST00000550620 NUDT16Q96DE0 195 aaKnown RBP18.31■□□□□ 0.52
PDE1B-207ENST00000550620 CCDC61Q9Y6R9 512 aa18.31■□□□□ 0.52
PDE1B-207ENST00000550620 AK9Q5TCS8 1911 aa18.3■□□□□ 0.52
PDE1B-207ENST00000550620 KRT24Q2M2I5 525 aa18.3■□□□□ 0.52
PDE1B-207ENST00000550620 SULT6B1Q6IMI4 303 aa18.3■□□□□ 0.52
PDE1B-207ENST00000550620 CPS1P31327 1500 aa18.3■□□□□ 0.52
PDE1B-207ENST00000550620 A2ML1A8K2U0 1454 aa18.29■□□□□ 0.52
PDE1B-207ENST00000550620 PHF14O94880 888 aa18.29■□□□□ 0.52
PDE1B-207ENST00000550620 SLC4A2P04920 1241 aa18.29■□□□□ 0.52
PDE1B-207ENST00000550620 EIF4A2Q14240 407 aaKnown RBP18.29■□□□□ 0.52
PDE1B-207ENST00000550620 ESYT1Q9BSJ8 1104 aa18.29■□□□□ 0.52
PDE1B-207ENST00000550620 MON2Q7Z3U7 1717 aa18.29■□□□□ 0.52
PDE1B-207ENST00000550620 XPCQ01831 940 aaPredicted RBP18.28■□□□□ 0.52
PDE1B-207ENST00000550620 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.28■□□□□ 0.52
PDE1B-207ENST00000550620 TSPY26PQ9H489 355 aa18.28■□□□□ 0.52
PDE1B-207ENST00000550620 SSH2Q76I76 1423 aa18.28■□□□□ 0.52
PDE1B-207ENST00000550620 MCM10Q7L590 875 aa18.28■□□□□ 0.52
PDE1B-207ENST00000550620 GNAI2P04899 355 aa18.27■□□□□ 0.52
PDE1B-207ENST00000550620 MTERF4Q7Z6M4 381 aaKnown RBP18.27■□□□□ 0.52
PDE1B-207ENST00000550620 AEBP1Q8IUX7 1158 aa18.27■□□□□ 0.52
PDE1B-207ENST00000550620 SETD1AO15047 1707 aaKnown RBP18.27■□□□□ 0.52
PDE1B-207ENST00000550620 UQCRHLA0A096LP55 91 aa18.27■□□□□ 0.51
PDE1B-207ENST00000550620 UQCRHP07919 91 aa18.27■□□□□ 0.51
PDE1B-207ENST00000550620 NSFL1CQ9UNZ2 370 aaKnown RBP18.27■□□□□ 0.51
PDE1B-207ENST00000550620 FOXD4L5Q5VV16 416 aaPredicted RBP18.26■□□□□ 0.51
PDE1B-207ENST00000550620 FOXD4L4Q8WXT5 416 aaPredicted RBP18.26■□□□□ 0.51
PDE1B-207ENST00000550620 LRRCC1Q9C099 1032 aa18.26■□□□□ 0.51
PDE1B-207ENST00000550620 PPP6R1Q9UPN7 881 aa18.26■□□□□ 0.51
PDE1B-207ENST00000550620 C3P01024 1663 aa18.26■□□□□ 0.51
PDE1B-207ENST00000550620 DYNC1I1O14576 645 aa18.25■□□□□ 0.51
PDE1B-207ENST00000550620 SLC4A10Q6U841 1118 aa18.25■□□□□ 0.51
PDE1B-207ENST00000550620 SIRT1Q96EB6 747 aa18.25■□□□□ 0.51
PDE1B-207ENST00000550620 CRB1P82279 1406 aa18.25■□□□□ 0.51
PDE1B-207ENST00000550620 EPB41L2O43491 1005 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms