RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 CFDP1Q9UEE9 299 aaPredicted RBP10.26□□□□□ -0.77
PPFIA2-220ENST00000550584 ICE2Q659A1 982 aa10.26□□□□□ -0.77
PPFIA2-220ENST00000550584 DAAM2Q86T65 1068 aa10.26□□□□□ -0.77
PPFIA2-220ENST00000550584 SMC5Q8IY18 1101 aa10.26□□□□□ -0.77
PPFIA2-220ENST00000550584 EHBP1Q8NDI1 1231 aa10.26□□□□□ -0.77
PPFIA2-220ENST00000550584 RASSF8Q8NHQ8 419 aa10.26□□□□□ -0.77
PPFIA2-220ENST00000550584 RILPL2Q969X0 211 aa10.26□□□□□ -0.77
PPFIA2-220ENST00000550584 PANK2Q9BZ23 570 aa10.26□□□□□ -0.77
PPFIA2-220ENST00000550584 SCAND2PQ9GZW5 306 aaPredicted RBP10.26□□□□□ -0.77
PPFIA2-220ENST00000550584 GCOM1H8Y6P7 765 aaPredicted RBP10.26□□□□□ -0.77
PPFIA2-220ENST00000550584 MYZAPP0CAP1 466 aa10.26□□□□□ -0.77
PPFIA2-220ENST00000550584 RLBP1P12271 317 aa10.26□□□□□ -0.77
PPFIA2-220ENST00000550584 KANK4Q5T7N3 995 aaPredicted RBP10.26□□□□□ -0.77
PPFIA2-220ENST00000550584 ARFGAP2Q8N6H7 521 aa10.26□□□□□ -0.77
PPFIA2-220ENST00000550584 CEP83Q9Y592 693 aa10.26□□□□□ -0.77
PPFIA2-220ENST00000550584 RPUSD2Q8IZ73 545 aaKnown RBP10.25□□□□□ -0.77
PPFIA2-220ENST00000550584 ANKS4BQ8N8V4 417 aa10.25□□□□□ -0.77
PPFIA2-220ENST00000550584 PNISRQ8TF01 805 aaKnown RBP10.25□□□□□ -0.77
PPFIA2-220ENST00000550584 RAB3GAP1Q15042 981 aa10.25□□□□□ -0.77
PPFIA2-220ENST00000550584 ARHGAP29Q52LW3 1261 aa10.25□□□□□ -0.77
PPFIA2-220ENST00000550584 EFCAB13Q8IY85 973 aa10.25□□□□□ -0.77
PPFIA2-220ENST00000550584 VCXQ9H320 206 aa10.25□□□□□ -0.77
PPFIA2-220ENST00000550584 EPB41L2O43491 1005 aaKnown RBP10.25□□□□□ -0.77
PPFIA2-220ENST00000550584 ZFYP08048 801 aaPredicted RBP10.25□□□□□ -0.77
PPFIA2-220ENST00000550584 INPP5BP32019 993 aa10.25□□□□□ -0.77
PPFIA2-220ENST00000550584 NEK4P51957 841 aa10.25□□□□□ -0.77
PPFIA2-220ENST00000550584 RGL3Q3MIN7 710 aa10.25□□□□□ -0.77
PPFIA2-220ENST00000550584 HSF2BPO75031 334 aa10.25□□□□□ -0.77
PPFIA2-220ENST00000550584 ZBTB17Q13105 803 aa10.25□□□□□ -0.77
PPFIA2-220ENST00000550584 DBN1Q16643 649 aa10.25□□□□□ -0.77
PPFIA2-220ENST00000550584 STAC3Q96MF2 364 aa10.25□□□□□ -0.77
PPFIA2-220ENST00000550584 NAA15Q9BXJ9 866 aaKnown RBP10.25□□□□□ -0.77
PPFIA2-220ENST00000550584 FOXD4L6Q3SYB3 417 aaPredicted RBP10.24□□□□□ -0.77
PPFIA2-220ENST00000550584 C6orf163Q5TEZ5 329 aa10.24□□□□□ -0.77
PPFIA2-220ENST00000550584 FOXD4L3Q6VB84 417 aaPredicted RBP10.24□□□□□ -0.77
PPFIA2-220ENST00000550584 APBB1O00213 710 aa10.24□□□□□ -0.77
PPFIA2-220ENST00000550584 UBE2HP62256 183 aa10.24□□□□□ -0.77
PPFIA2-220ENST00000550584 PIP4K2BP78356 416 aa10.24□□□□□ -0.77
PPFIA2-220ENST00000550584 VEZTQ9HBM0 779 aa10.24□□□□□ -0.77
PPFIA2-220ENST00000550584 FIBPO43427 364 aa10.24□□□□□ -0.77
PPFIA2-220ENST00000550584 NAP1L1P55209 391 aaKnown RBP10.24□□□□□ -0.77
PPFIA2-220ENST00000550584 IRX1P78414 480 aaPredicted RBP10.24□□□□□ -0.77
PPFIA2-220ENST00000550584 IFFO1Q0D2I5 559 aa10.24□□□□□ -0.77
PPFIA2-220ENST00000550584 MCTP2Q6DN12 878 aa10.24□□□□□ -0.77
PPFIA2-220ENST00000550584 CNPY4Q8N129 248 aa10.24□□□□□ -0.77
PPFIA2-220ENST00000550584 NUCKS1Q9H1E3 243 aaKnown RBP10.24□□□□□ -0.77
PPFIA2-220ENST00000550584 ZSCAN26Q16670 478 aa10.23□□□□□ -0.77
PPFIA2-220ENST00000550584 CCDC40Q4G0X9 1142 aa10.23□□□□□ -0.77
PPFIA2-220ENST00000550584 MAGEC2Q9UBF1 373 aaPredicted RBP10.23□□□□□ -0.77
PPFIA2-220ENST00000550584 STAG3Q9UJ98 1225 aa10.23□□□□□ -0.77
PPFIA2-220ENST00000550584 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.23□□□□□ -0.77
PPFIA2-220ENST00000550584 SATB1Q01826 763 aa10.23□□□□□ -0.77
PPFIA2-220ENST00000550584 SAFBQ15424 915 aaKnown RBP eCLIP10.23□□□□□ -0.77
PPFIA2-220ENST00000550584 STX1AQ16623 288 aa10.23□□□□□ -0.77
PPFIA2-220ENST00000550584 DDX46Q7L014 1031 aaKnown RBP10.23□□□□□ -0.77
PPFIA2-220ENST00000550584 LUC7L2Q9Y383 392 aaKnown RBP10.23□□□□□ -0.77
PPFIA2-220ENST00000550584 HDGFL2Q7Z4V5 671 aaPredicted RBP10.23□□□□□ -0.77
PPFIA2-220ENST00000550584 ZNF428Q96B54 188 aa10.23□□□□□ -0.77
PPFIA2-220ENST00000550584 SPATA32Q96LK8 384 aa10.23□□□□□ -0.77
PPFIA2-220ENST00000550584 SRCIN1Q9C0H9 1055 aa10.23□□□□□ -0.77
PPFIA2-220ENST00000550584 CCDC30Q5VVM6 783 aa10.22□□□□□ -0.77
PPFIA2-220ENST00000550584 FBF1Q8TES7 1133 aa10.22□□□□□ -0.77
PPFIA2-220ENST00000550584 LNPKQ9C0E8 428 aa10.22□□□□□ -0.77
PPFIA2-220ENST00000550584 FAM184BQ9ULE4 1060 aa10.22□□□□□ -0.77
PPFIA2-220ENST00000550584 ELP1O95163 1332 aa10.22□□□□□ -0.77
PPFIA2-220ENST00000550584 CUX1P39880 1505 aa10.22□□□□□ -0.77
PPFIA2-220ENST00000550584 NEDD9Q14511 834 aa10.22□□□□□ -0.77
PPFIA2-220ENST00000550584 RAD50Q92878 1312 aa10.22□□□□□ -0.77
PPFIA2-220ENST00000550584 FSD2A1L4K1 749 aa10.22□□□□□ -0.77
PPFIA2-220ENST00000550584 DHX16O60231 1041 aaKnown RBP10.22□□□□□ -0.77
PPFIA2-220ENST00000550584 GCKP35557 465 aa10.22□□□□□ -0.77
PPFIA2-220ENST00000550584 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.22□□□□□ -0.77
PPFIA2-220ENST00000550584 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.22□□□□□ -0.77
PPFIA2-220ENST00000550584 KANK1Q14678 1352 aa10.22□□□□□ -0.77
PPFIA2-220ENST00000550584 KIF4BQ2VIQ3 1234 aa10.22□□□□□ -0.77
PPFIA2-220ENST00000550584 CEP57Q86XR8 500 aa10.22□□□□□ -0.77
PPFIA2-220ENST00000550584 FAM76AQ8TAV0 307 aa10.22□□□□□ -0.77
PPFIA2-220ENST00000550584 CCDC114Q96M63 670 aa10.22□□□□□ -0.77
PPFIA2-220ENST00000550584 NCAPGQ9BPX3 1015 aa10.22□□□□□ -0.77
PPFIA2-220ENST00000550584 JRKLQ9Y4A0 524 aa10.22□□□□□ -0.77
PPFIA2-220ENST00000550584 EIF4G1Q04637 1599 aaKnown RBP10.21□□□□□ -0.77
PPFIA2-220ENST00000550584 PKD2Q13563 968 aa10.21□□□□□ -0.77
PPFIA2-220ENST00000550584 FAM200AQ8TCP9 573 aa10.21□□□□□ -0.77
PPFIA2-220ENST00000550584 AFAP1L1Q8TED9 768 aa10.21□□□□□ -0.77
PPFIA2-220ENST00000550584 CFAP57Q96MR6 1250 aa10.21□□□□□ -0.77
PPFIA2-220ENST00000550584 SMARCA2P51531 1590 aa10.21□□□□□ -0.77
PPFIA2-220ENST00000550584 IBTKQ9P2D0 1353 aaPredicted RBP10.21□□□□□ -0.77
PPFIA2-220ENST00000550584 SSFA2P28290 1259 aa10.21□□□□□ -0.77
PPFIA2-220ENST00000550584 SLMAPQ14BN4 828 aa10.21□□□□□ -0.77
PPFIA2-220ENST00000550584 CNTROBQ8N137 903 aa10.21□□□□□ -0.77
PPFIA2-220ENST00000550584 STMN4Q9H169 189 aaPredicted RBP10.21□□□□□ -0.77
PPFIA2-220ENST00000550584 CC2D2AQ9P2K1 1620 aa10.21□□□□□ -0.77
PPFIA2-220ENST00000550584 U2AF2P26368 475 aaKnown RBP eCLIP10.21□□□□□ -0.78
PPFIA2-220ENST00000550584 SH2B1Q9NRF2 756 aaPredicted RBP10.21□□□□□ -0.78
PPFIA2-220ENST00000550584 MVPQ14764 893 aaKnown RBP10.21□□□□□ -0.78
PPFIA2-220ENST00000550584 SKIDA1Q1XH10 827 aa10.21□□□□□ -0.78
PPFIA2-220ENST00000550584 PANK3Q9H999 370 aa10.21□□□□□ -0.78
PPFIA2-220ENST00000550584 MX1P20591 662 aa10.2□□□□□ -0.78
PPFIA2-220ENST00000550584 WHAMMP3Q1A5X7 153 aa10.2□□□□□ -0.78
PPFIA2-220ENST00000550584 CHD1LQ86WJ1 897 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms