RNA–Protein interactions for RNA: ENST00000550559.5

TSFM-210, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 5 BASIC

Gene TSFM, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-210ENST00000550559 NUP188Q5SRE5 1749 aa22.48■■□□□ 1.19
TSFM-210ENST00000550559 ACSBG1Q96GR2 724 aa22.48■■□□□ 1.19
TSFM-210ENST00000550559 KAT6BQ8WYB5 2073 aa22.48■■□□□ 1.19
TSFM-210ENST00000550559 NCAPD2Q15021 1401 aa22.48■■□□□ 1.19
TSFM-210ENST00000550559 AMER1Q5JTC6 1135 aaPredicted RBP22.47■■□□□ 1.19
TSFM-210ENST00000550559 PSDA5PKW4 1024 aaPredicted RBP22.46■■□□□ 1.19
TSFM-210ENST00000550559 PTF1AQ7RTS3 328 aa22.46■■□□□ 1.19
TSFM-210ENST00000550559 KCNQ2O43526 872 aa22.45■■□□□ 1.18
TSFM-210ENST00000550559 R3HDM1Q15032 1099 aaKnown RBP22.45■■□□□ 1.18
TSFM-210ENST00000550559 PCDH11XQ9BZA7 1347 aa22.45■■□□□ 1.18
TSFM-210ENST00000550559 PCDH11YQ9BZA8 1340 aa22.45■■□□□ 1.18
TSFM-210ENST00000550559 SHANK3Q9BYB0 1731 aa22.44■■□□□ 1.18
TSFM-210ENST00000550559 EIF4A2Q14240 407 aaKnown RBP22.43■■□□□ 1.18
TSFM-210ENST00000550559 EYA1Q99502 592 aa22.43■■□□□ 1.18
TSFM-210ENST00000550559 PLEKHG2Q9H7P9 1386 aa22.41■■□□□ 1.18
TSFM-210ENST00000550559 BTAF1O14981 1849 aa22.41■■□□□ 1.18
TSFM-210ENST00000550559 PER1O15534 1290 aaPredicted RBP22.41■■□□□ 1.18
TSFM-210ENST00000550559 NPC1L1Q9UHC9 1359 aa22.4■■□□□ 1.18
TSFM-210ENST00000550559 TXNRD1Q16881 649 aa22.4■■□□□ 1.18
TSFM-210ENST00000550559 PKD1L3Q7Z443 1732 aa22.4■■□□□ 1.18
TSFM-210ENST00000550559 DOT1LQ8TEK3 1739 aa22.4■■□□□ 1.18
TSFM-210ENST00000550559 SYTL4Q96C24 671 aaPredicted RBP22.39■■□□□ 1.17
TSFM-210ENST00000550559 SPG7Q9UQ90 795 aa22.39■■□□□ 1.17
TSFM-210ENST00000550559 LRP5O75197 1615 aa22.39■■□□□ 1.17
TSFM-210ENST00000550559 IGSF1Q8N6C5 1336 aa22.38■■□□□ 1.17
TSFM-210ENST00000550559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.38■■□□□ 1.17
TSFM-210ENST00000550559 PRIM1P49642 420 aaKnown RBP22.36■■□□□ 1.17
TSFM-210ENST00000550559 CC2D1BQ5T0F9 858 aaKnown RBP22.36■■□□□ 1.17
TSFM-210ENST00000550559 PROM2Q8N271 834 aa22.36■■□□□ 1.17
TSFM-210ENST00000550559 SRCAPQ6ZRS2 3230 aa22.35■■□□□ 1.17
TSFM-210ENST00000550559 CYP27B1O15528 508 aa22.34■■□□□ 1.17
TSFM-210ENST00000550559 STK32BQ9NY57 414 aa22.34■■□□□ 1.17
TSFM-210ENST00000550559 ANO8Q9HCE9 1232 aaPredicted RBP22.33■■□□□ 1.17
TSFM-210ENST00000550559 MTHFSP49914 203 aa22.31■■□□□ 1.16
TSFM-210ENST00000550559 SLC27A3Q5K4L6 730 aa22.31■■□□□ 1.16
TSFM-210ENST00000550559 NKX1-1Q15270 411 aaPredicted RBP22.29■■□□□ 1.16
TSFM-210ENST00000550559 IFNL2Q8IZJ0 200 aa22.29■■□□□ 1.16
TSFM-210ENST00000550559 IL13P35225 146 aa22.28■■□□□ 1.16
TSFM-210ENST00000550559 SLC15A2Q16348 729 aa22.28■■□□□ 1.16
TSFM-210ENST00000550559 PLEKHO1Q53GL0 409 aaPredicted RBP22.28■■□□□ 1.16
TSFM-210ENST00000550559 AMOTQ4VCS5 1084 aa22.27■■□□□ 1.16
TSFM-210ENST00000550559 PAPPAQ13219 1627 aa22.27■■□□□ 1.16
TSFM-210ENST00000550559 KDRP35968 1356 aa22.26■■□□□ 1.15
TSFM-210ENST00000550559 PHKG2P15735 406 aa22.26■■□□□ 1.15
TSFM-210ENST00000550559 HMGB2P26583 209 aaKnown RBP22.26■■□□□ 1.15
TSFM-210ENST00000550559 CNGB1Q14028 1251 aaPredicted RBP22.26■■□□□ 1.15
TSFM-210ENST00000550559 HSP90AB1P08238 724 aaKnown RBP22.25■■□□□ 1.15
TSFM-210ENST00000550559 SULT6B1Q6IMI4 303 aa22.25■■□□□ 1.15
TSFM-210ENST00000550559 LY75O60449 1722 aa22.25■■□□□ 1.15
TSFM-210ENST00000550559 TOGARAM1Q9Y4F4 1720 aa22.25■■□□□ 1.15
TSFM-210ENST00000550559 DIAPH1O60610 1272 aaKnown RBP22.24■■□□□ 1.15
TSFM-210ENST00000550559 MPRIPQ6WCQ1 1025 aa22.24■■□□□ 1.15
TSFM-210ENST00000550559 SMARCC1Q92922 1105 aaPredicted RBP22.24■■□□□ 1.15
TSFM-210ENST00000550559 SPON1Q9HCB6 807 aa22.24■■□□□ 1.15
TSFM-210ENST00000550559 LRRC4BQ9NT99 713 aa22.24■■□□□ 1.15
TSFM-210ENST00000550559 AEBP1Q8IUX7 1158 aa22.23■■□□□ 1.15
TSFM-210ENST00000550559 CCNL1Q9UK58 526 aaPredicted RBP22.23■■□□□ 1.15
TSFM-210ENST00000550559 CASZ1Q86V15 1759 aa22.22■■□□□ 1.15
TSFM-210ENST00000550559 ITGB4P16144 1822 aa22.22■■□□□ 1.15
TSFM-210ENST00000550559 ZNF530Q6P9A1 599 aaPredicted RBP22.22■■□□□ 1.15
TSFM-210ENST00000550559 TMOD3Q9NYL9 352 aa22.22■■□□□ 1.15
TSFM-210ENST00000550559 PALLDQ8WX93 1383 aa22.22■■□□□ 1.15
TSFM-210ENST00000550559 C1orf141Q5JVX7 400 aa22.21■■□□□ 1.15
TSFM-210ENST00000550559 DCAF5Q96JK2 942 aa22.2■■□□□ 1.14
TSFM-210ENST00000550559 CFAP53Q96M91 514 aa22.2■■□□□ 1.14
TSFM-210ENST00000550559 PIGBQ92521 554 aa22.19■■□□□ 1.14
TSFM-210ENST00000550559 COL3A1P02461 1466 aaPredicted RBP22.18■■□□□ 1.14
TSFM-210ENST00000550559 ZNF827Q17R98 1081 aa22.18■■□□□ 1.14
TSFM-210ENST00000550559 AKT1S1Q96B36 256 aa22.18■■□□□ 1.14
TSFM-210ENST00000550559 ERVV-2B6SEH9 535 aa22.17■■□□□ 1.14
TSFM-210ENST00000550559 PPP1R1BQ9UD71 204 aaPredicted RBP22.17■■□□□ 1.14
TSFM-210ENST00000550559 QSER1Q2KHR3 1735 aa22.15■■□□□ 1.14
TSFM-210ENST00000550559 HMOX1P09601 288 aa22.15■■□□□ 1.14
TSFM-210ENST00000550559 KCNQ4P56696 695 aa22.15■■□□□ 1.14
TSFM-210ENST00000550559 TFCP2L1Q9NZI6 479 aa22.15■■□□□ 1.14
TSFM-210ENST00000550559 U2SURPO15042 1029 aaKnown RBP22.14■■□□□ 1.13
TSFM-210ENST00000550559 ZBTB7AO95365 584 aa22.14■■□□□ 1.13
TSFM-210ENST00000550559 MTFR1LQ9H019 292 aa22.14■■□□□ 1.13
TSFM-210ENST00000550559 PDGFDQ9GZP0 370 aaPredicted RBP22.13■■□□□ 1.13
TSFM-210ENST00000550559 C5P01031 1676 aa22.13■■□□□ 1.13
TSFM-210ENST00000550559 KDM6AO15550 1401 aaPredicted RBP22.13■■□□□ 1.13
TSFM-210ENST00000550559 PPP2R1AP30153 589 aa22.12■■□□□ 1.13
TSFM-210ENST00000550559 ZEB1P37275 1124 aaPredicted RBP22.12■■□□□ 1.13
TSFM-210ENST00000550559 AKAP4Q5JQC9 854 aa22.12■■□□□ 1.13
TSFM-210ENST00000550559 NUDCQ9Y266 331 aa22.12■■□□□ 1.13
TSFM-210ENST00000550559 CABP4P57796 275 aa22.11■■□□□ 1.13
TSFM-210ENST00000550559 SLC16A10Q8TF71 515 aa22.11■■□□□ 1.13
TSFM-210ENST00000550559 LOC102724428A0A0B4J2F2 783 aa22.1■■□□□ 1.13
TSFM-210ENST00000550559 SIK1P57059 783 aa22.1■■□□□ 1.13
TSFM-210ENST00000550559 ASAP1Q9ULH1 1129 aa22.1■■□□□ 1.13
TSFM-210ENST00000550559 PNPLA7Q6ZV29 1317 aa22.09■■□□□ 1.13
TSFM-210ENST00000550559 TAF1LQ8IZX4 1826 aa22.09■■□□□ 1.13
TSFM-210ENST00000550559 ATF5Q9Y2D1 282 aaPredicted RBP22.09■■□□□ 1.13
TSFM-210ENST00000550559 TUBGCP6Q96RT7 1819 aa22.08■■□□□ 1.13
TSFM-210ENST00000550559 FLAD1Q8NFF5 587 aa22.08■■□□□ 1.13
TSFM-210ENST00000550559 ATG3Q9NT62 314 aa22.08■■□□□ 1.13
TSFM-210ENST00000550559 AK7Q96M32 723 aa22.07■■□□□ 1.12
TSFM-210ENST00000550559 C4BP0C0L5 1744 aa22.06■■□□□ 1.12
TSFM-210ENST00000550559 PTGER2P43116 358 aa22.06■■□□□ 1.12
TSFM-210ENST00000550559 GAS2L2Q8NHY3 880 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms