RNA–Protein interactions for RNA: ENST00000550527.5

APAF1-209, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 6,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-209ENST00000550527 CHD1LQ86WJ1 897 aa5.83□□□□□ -1.48
APAF1-209ENST00000550527 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.83□□□□□ -1.48
APAF1-209ENST00000550527 RNF123Q5XPI4 1314 aa5.83□□□□□ -1.48
APAF1-209ENST00000550527 RRP7AQ9Y3A4 280 aaKnown RBP5.83□□□□□ -1.48
APAF1-209ENST00000550527 ZSCAN20P17040 1043 aaPredicted RBP5.82□□□□□ -1.48
APAF1-209ENST00000550527 INPP5BP32019 993 aa5.82□□□□□ -1.48
APAF1-209ENST00000550527 MVPQ14764 893 aaKnown RBP5.82□□□□□ -1.48
APAF1-209ENST00000550527 TERF2Q15554 542 aa5.82□□□□□ -1.48
APAF1-209ENST00000550527 RNF168Q8IYW5 571 aaPredicted RBP5.82□□□□□ -1.48
APAF1-209ENST00000550527 UPF3BQ9BZI7 483 aaKnown RBP5.82□□□□□ -1.48
APAF1-209ENST00000550527 MYCNP04198 464 aaPredicted RBP5.82□□□□□ -1.48
APAF1-209ENST00000550527 B4GALNT4Q76KP1 1039 aa5.82□□□□□ -1.48
APAF1-209ENST00000550527 CCDC186Q7Z3E2 898 aa5.82□□□□□ -1.48
APAF1-209ENST00000550527 KIF5CO60282 957 aa5.82□□□□□ -1.48
APAF1-209ENST00000550527 HCLS1P14317 486 aaPredicted RBP5.82□□□□□ -1.48
APAF1-209ENST00000550527 FILIP1LQ4L180 1135 aa5.82□□□□□ -1.48
APAF1-209ENST00000550527 ODF2Q5BJF6 829 aa5.82□□□□□ -1.48
APAF1-209ENST00000550527 MSL1Q68DK7 614 aa5.82□□□□□ -1.48
APAF1-209ENST00000550527 HDXQ7Z353 690 aa5.82□□□□□ -1.48
APAF1-209ENST00000550527 RPUSD2Q8IZ73 545 aaKnown RBP5.82□□□□□ -1.48
APAF1-209ENST00000550527 RUNDC1Q96C34 613 aa5.82□□□□□ -1.48
APAF1-209ENST00000550527 ZNF396Q96N95 335 aaPredicted RBP5.82□□□□□ -1.48
APAF1-209ENST00000550527 VEZTQ9HBM0 779 aa5.82□□□□□ -1.48
APAF1-209ENST00000550527 ERCC3P19447 782 aa5.82□□□□□ -1.48
APAF1-209ENST00000550527 OAS2P29728 719 aaKnown RBP5.82□□□□□ -1.48
APAF1-209ENST00000550527 NAP1L1P55209 391 aaKnown RBP5.82□□□□□ -1.48
APAF1-209ENST00000550527 BIRC2Q13490 618 aa5.82□□□□□ -1.48
APAF1-209ENST00000550527 TSC1Q92574 1164 aa5.82□□□□□ -1.48
APAF1-209ENST00000550527 GOLGA1Q92805 767 aa5.82□□□□□ -1.48
APAF1-209ENST00000550527 LRPPRCP42704 1394 aaKnown RBP5.82□□□□□ -1.48
APAF1-209ENST00000550527 RAPGEF2Q9Y4G8 1499 aa5.82□□□□□ -1.48
APAF1-209ENST00000550527 PLEKHD1A6NEE1 506 aa5.82□□□□□ -1.48
APAF1-209ENST00000550527 KIF3CO14782 793 aa5.82□□□□□ -1.48
APAF1-209ENST00000550527 KIF5BP33176 963 aa5.82□□□□□ -1.48
APAF1-209ENST00000550527 UBE2HP62256 183 aa5.82□□□□□ -1.48
APAF1-209ENST00000550527 AKAP17AQ02040 695 aaKnown RBP5.82□□□□□ -1.48
APAF1-209ENST00000550527 PPFIBP1Q86W92 1011 aa5.82□□□□□ -1.48
APAF1-209ENST00000550527 API5Q9BZZ5 524 aaKnown RBP5.82□□□□□ -1.48
APAF1-209ENST00000550527 MAP3K1Q13233 1512 aa5.81□□□□□ -1.48
APAF1-209ENST00000550527 MX1P20591 662 aa5.81□□□□□ -1.48
APAF1-209ENST00000550527 SCLT1Q96NL6 688 aa5.81□□□□□ -1.48
APAF1-209ENST00000550527 RLBP1P12271 317 aa5.81□□□□□ -1.48
APAF1-209ENST00000550527 ZKSCAN8Q15776 578 aaPredicted RBP5.81□□□□□ -1.48
APAF1-209ENST00000550527 EFCAB13Q8IY85 973 aa5.81□□□□□ -1.48
APAF1-209ENST00000550527 RGS22Q8NE09 1264 aa5.81□□□□□ -1.48
APAF1-209ENST00000550527 HNRNPH2P55795 449 aaKnown RBP5.81□□□□□ -1.48
APAF1-209ENST00000550527 ELF2Q15723 593 aa5.81□□□□□ -1.48
APAF1-209ENST00000550527 CCDC121Q6ZUS5 278 aa5.81□□□□□ -1.48
APAF1-209ENST00000550527 NEK11Q8NG66 645 aa5.81□□□□□ -1.48
APAF1-209ENST00000550527 CTCFLQ8NI51 663 aaPredicted RBP5.81□□□□□ -1.48
APAF1-209ENST00000550527 SPATA32Q96LK8 384 aa5.81□□□□□ -1.48
APAF1-209ENST00000550527 ANO10Q9NW15 660 aa5.81□□□□□ -1.48
APAF1-209ENST00000550527 SUFUQ9UMX1 484 aa5.81□□□□□ -1.48
APAF1-209ENST00000550527 ZBTB22O15209 634 aa5.81□□□□□ -1.48
APAF1-209ENST00000550527 SKILP12757 684 aa5.81□□□□□ -1.48
APAF1-209ENST00000550527 ATP2B3Q16720 1220 aa5.81□□□□□ -1.48
APAF1-209ENST00000550527 ERBB4Q15303 1308 aa5.81□□□□□ -1.48
APAF1-209ENST00000550527 CTAGE5O15320 804 aa5.81□□□□□ -1.48
APAF1-209ENST00000550527 SLFN5Q08AF3 891 aa5.81□□□□□ -1.48
APAF1-209ENST00000550527 MCM6Q14566 821 aa5.81□□□□□ -1.48
APAF1-209ENST00000550527 PCMTD1Q96MG8 357 aaPredicted RBP5.81□□□□□ -1.48
APAF1-209ENST00000550527 NUCKS1Q9H1E3 243 aaKnown RBP5.81□□□□□ -1.48
APAF1-209ENST00000550527 DDX19AQ9NUU7 478 aaKnown RBP5.81□□□□□ -1.48
APAF1-209ENST00000550527 TUBBP07437 444 aa5.8□□□□□ -1.48
APAF1-209ENST00000550527 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.8□□□□□ -1.48
APAF1-209ENST00000550527 NKTRP30414 1462 aaKnown RBP5.8□□□□□ -1.48
APAF1-209ENST00000550527 PTGS1P23219 599 aa5.8□□□□□ -1.48
APAF1-209ENST00000550527 PSMA5P28066 241 aa5.8□□□□□ -1.48
APAF1-209ENST00000550527 ARHGAP25P42331 645 aa5.8□□□□□ -1.48
APAF1-209ENST00000550527 CCDC181Q5TID7 509 aa5.8□□□□□ -1.48
APAF1-209ENST00000550527 GIGYF2Q6Y7W6 1299 aaKnown RBP5.8□□□□□ -1.48
APAF1-209ENST00000550527 FAM200AQ8TCP9 573 aa5.8□□□□□ -1.48
APAF1-209ENST00000550527 FMNL2Q96PY5 1086 aa5.8□□□□□ -1.48
APAF1-209ENST00000550527 CFDP1Q9UEE9 299 aaPredicted RBP5.8□□□□□ -1.48
APAF1-209ENST00000550527 DACH1Q9UI36 760 aa5.8□□□□□ -1.48
APAF1-209ENST00000550527 MAGEA9P43362 315 aa5.8□□□□□ -1.48
APAF1-209ENST00000550527 AFAP1L1Q8TED9 768 aa5.8□□□□□ -1.48
APAF1-209ENST00000550527 CCDC114Q96M63 670 aa5.8□□□□□ -1.48
APAF1-209ENST00000550527 TACO1Q9BSH4 297 aaKnown RBP5.8□□□□□ -1.48
APAF1-209ENST00000550527 RAI14Q9P0K7 980 aa5.8□□□□□ -1.48
APAF1-209ENST00000550527 NEDD9Q14511 834 aa5.8□□□□□ -1.48
APAF1-209ENST00000550527 CAMK4Q16566 473 aa5.8□□□□□ -1.48
APAF1-209ENST00000550527 KIF4BQ2VIQ3 1234 aa5.8□□□□□ -1.48
APAF1-209ENST00000550527 CLASRPQ8N2M8 674 aaKnown RBP5.8□□□□□ -1.48
APAF1-209ENST00000550527 PEG3Q9GZU2 1588 aa5.8□□□□□ -1.48
APAF1-209ENST00000550527 OPA1O60313 960 aa5.8□□□□□ -1.48
APAF1-209ENST00000550527 RAD51AP2Q09MP3 1159 aa5.8□□□□□ -1.48
APAF1-209ENST00000550527 IBTKQ9P2D0 1353 aaPredicted RBP5.8□□□□□ -1.48
APAF1-209ENST00000550527 CCDC144AA2RUR9 1427 aa5.8□□□□□ -1.48
APAF1-209ENST00000550527 A6NNZ2 444 aa5.79□□□□□ -1.48
APAF1-209ENST00000550527 DBN1Q16643 649 aa5.79□□□□□ -1.48
APAF1-209ENST00000550527 TUBB8Q3ZCM7 444 aa5.79□□□□□ -1.48
APAF1-209ENST00000550527 MMS22LQ6ZRQ5 1243 aa5.79□□□□□ -1.48
APAF1-209ENST00000550527 CCDC83Q8IWF9 413 aa5.79□□□□□ -1.48
APAF1-209ENST00000550527 ZSCAN31Q96LW9 406 aaPredicted RBP5.79□□□□□ -1.48
APAF1-209ENST00000550527 NCOA1Q15788 1441 aa5.79□□□□□ -1.48
APAF1-209ENST00000550527 ATP8B1O43520 1251 aa5.79□□□□□ -1.48
APAF1-209ENST00000550527 FKBP5Q13451 457 aaPredicted RBP5.79□□□□□ -1.48
APAF1-209ENST00000550527 SYT10Q6XYQ8 523 aa5.79□□□□□ -1.48
APAF1-209ENST00000550527 MYO1CO00159 1063 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms