RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 TMF1P82094 1093 aa15.22■□□□□ 0.03
PFDN5-210ENST00000550513 UTRNP46939 3433 aa15.21■□□□□ 0.03
PFDN5-210ENST00000550513 DDX54Q8TDD1 881 aaKnown RBP15.21■□□□□ 0.03
PFDN5-210ENST00000550513 ZNF827Q17R98 1081 aa15.2■□□□□ 0.02
PFDN5-210ENST00000550513 NSD2O96028 1365 aa15.2■□□□□ 0.02
PFDN5-210ENST00000550513 FBLN1P23142 703 aa15.19■□□□□ 0.02
PFDN5-210ENST00000550513 TRIM26Q12899 539 aaPredicted RBP15.19■□□□□ 0.02
PFDN5-210ENST00000550513 RRS1Q15050 365 aaKnown RBP15.19■□□□□ 0.02
PFDN5-210ENST00000550513 SYTL4Q96C24 671 aaPredicted RBP15.19■□□□□ 0.02
PFDN5-210ENST00000550513 SGIP1Q9BQI5 828 aa15.18■□□□□ 0.02
PFDN5-210ENST00000550513 FHDC1Q9C0D6 1143 aaPredicted RBP15.18■□□□□ 0.02
PFDN5-210ENST00000550513 GGNBP2Q9H3C7 697 aa15.18■□□□□ 0.02
PFDN5-210ENST00000550513 LRRC4BQ9NT99 713 aa15.18■□□□□ 0.02
PFDN5-210ENST00000550513 FLT4P35916 1363 aa15.18■□□□□ 0.02
PFDN5-210ENST00000550513 FYB1O15117 783 aa15.17■□□□□ 0.02
PFDN5-210ENST00000550513 SLC27A3Q5K4L6 730 aa15.17■□□□□ 0.02
PFDN5-210ENST00000550513 NSD3Q9BZ95 1437 aa15.17■□□□□ 0.02
PFDN5-210ENST00000550513 KIF24Q5T7B8 1368 aa15.16■□□□□ 0.02
PFDN5-210ENST00000550513 MAP3K5Q99683 1374 aa15.16■□□□□ 0.02
PFDN5-210ENST00000550513 CDCA8Q53HL2 280 aa15.16■□□□□ 0.02
PFDN5-210ENST00000550513 ZCRB1Q8TBF4 217 aaKnown RBP15.16■□□□□ 0.02
PFDN5-210ENST00000550513 UBR3Q6ZT12 1888 aa15.16■□□□□ 0.02
PFDN5-210ENST00000550513 CGNL1Q0VF96 1302 aa15.16■□□□□ 0.02
PFDN5-210ENST00000550513 C4BP0C0L5 1744 aa15.15■□□□□ 0.02
PFDN5-210ENST00000550513 INSRP06213 1382 aa15.15■□□□□ 0.02
PFDN5-210ENST00000550513 USHBP1Q8N6Y0 703 aa15.15■□□□□ 0.02
PFDN5-210ENST00000550513 AKT1S1Q96B36 256 aa15.15■□□□□ 0.02
PFDN5-210ENST00000550513 SYT17Q9BSW7 474 aa15.15■□□□□ 0.02
PFDN5-210ENST00000550513 PRIM1P49642 420 aaKnown RBP15.14■□□□□ 0.01
PFDN5-210ENST00000550513 NBPF6Q5VWK0 638 aa15.14■□□□□ 0.01
PFDN5-210ENST00000550513 RAPGEF4Q8WZA2 1011 aa15.14■□□□□ 0.01
PFDN5-210ENST00000550513 NBPF4Q96M43 638 aa15.14■□□□□ 0.01
PFDN5-210ENST00000550513 ARXQ96QS3 562 aa15.14■□□□□ 0.01
PFDN5-210ENST00000550513 PNPLA7Q6ZV29 1317 aa15.14■□□□□ 0.01
PFDN5-210ENST00000550513 PCDH11XQ9BZA7 1347 aa15.13■□□□□ 0.01
PFDN5-210ENST00000550513 PCDH11YQ9BZA8 1340 aa15.13■□□□□ 0.01
PFDN5-210ENST00000550513 TATP17735 454 aaPredicted RBP15.12■□□□□ 0.01
PFDN5-210ENST00000550513 NCAPD2Q15021 1401 aa15.11■□□□□ 0.01
PFDN5-210ENST00000550513 KCNQ4P56696 695 aa15.11■□□□□ 0.01
PFDN5-210ENST00000550513 HSP90AB2PQ58FF8 381 aa15.11■□□□□ 0.01
PFDN5-210ENST00000550513 SLC16A10Q8TF71 515 aa15.11■□□□□ 0.01
PFDN5-210ENST00000550513 TFCP2L1Q9NZI6 479 aa15.11■□□□□ 0.01
PFDN5-210ENST00000550513 CCNL1Q9UK58 526 aaPredicted RBP15.11■□□□□ 0.01
PFDN5-210ENST00000550513 GOLGB1Q14789 3259 aaKnown RBP15.1■□□□□ 0.01
PFDN5-210ENST00000550513 POLD1P28340 1107 aa15.1■□□□□ 0.01
PFDN5-210ENST00000550513 VIRMAQ69YN4 1812 aaKnown RBP15.1■□□□□ 0.01
PFDN5-210ENST00000550513 KLHL34Q8N239 644 aa15.09■□□□□ 0.01
PFDN5-210ENST00000550513 EMILIN1Q9Y6C2 1016 aa15.08■□□□□ 0
PFDN5-210ENST00000550513 CARD14Q9BXL6 1004 aa15.07■□□□□ 0
PFDN5-210ENST00000550513 PALLDQ8WX93 1383 aa15.07■□□□□ 0
PFDN5-210ENST00000550513 COL5A3P25940 1745 aaPredicted RBP15.06■□□□□ 0
PFDN5-210ENST00000550513 TIMELESSQ9UNS1 1208 aa15.06■□□□□ 0
PFDN5-210ENST00000550513 PPM1GO15355 546 aaPredicted RBP15.05■□□□□ -0
PFDN5-210ENST00000550513 CLSPNQ9HAW4 1339 aa15.05■□□□□ -0
PFDN5-210ENST00000550513 ZNF831Q5JPB2 1677 aa15.05■□□□□ -0
PFDN5-210ENST00000550513 MSH5O43196 834 aa15.04■□□□□ -0
PFDN5-210ENST00000550513 ZNF784Q8NCA9 323 aaPredicted RBP15.04■□□□□ -0
PFDN5-210ENST00000550513 CYP27B1O15528 508 aa15.03■□□□□ -0
PFDN5-210ENST00000550513 GPR162Q16538 588 aa15.03■□□□□ -0
PFDN5-210ENST00000550513 MPRIPQ6WCQ1 1025 aa15.03■□□□□ -0
PFDN5-210ENST00000550513 C4AP0C0L4 1744 aa15.03■□□□□ -0
PFDN5-210ENST00000550513 COL23A1Q86Y22 540 aaPredicted RBP15.02■□□□□ -0
PFDN5-210ENST00000550513 KIF13BQ9NQT8 1826 aa15.01□□□□□ -0.01
PFDN5-210ENST00000550513 WASHC2AQ641Q2 1341 aa15.01□□□□□ -0.01
PFDN5-210ENST00000550513 HMGB2P26583 209 aaKnown RBP15.01□□□□□ -0.01
PFDN5-210ENST00000550513 PELP1Q8IZL8 1130 aaKnown RBP15.01□□□□□ -0.01
PFDN5-210ENST00000550513 NLGN2Q8NFZ4 835 aa15.01□□□□□ -0.01
PFDN5-210ENST00000550513 POLR3GLQ9BT43 218 aa15.01□□□□□ -0.01
PFDN5-210ENST00000550513 MSL1Q68DK7 614 aa15□□□□□ -0.01
PFDN5-210ENST00000550513 SMARCC1Q92922 1105 aaPredicted RBP15□□□□□ -0.01
PFDN5-210ENST00000550513 SPG7Q9UQ90 795 aa15□□□□□ -0.01
PFDN5-210ENST00000550513 SCN11AQ9UI33 1791 aa15□□□□□ -0.01
PFDN5-210ENST00000550513 PLEKHG2Q9H7P9 1386 aa14.99□□□□□ -0.01
PFDN5-210ENST00000550513 PCGF6Q9BYE7 350 aa14.99□□□□□ -0.01
PFDN5-210ENST00000550513 KIAA1551Q9HCM1 1747 aa14.98□□□□□ -0.01
PFDN5-210ENST00000550513 FLAD1Q8NFF5 587 aa14.98□□□□□ -0.01
PFDN5-210ENST00000550513 AK7Q96M32 723 aa14.98□□□□□ -0.01
PFDN5-210ENST00000550513 CICQ96RK0 1608 aaPredicted RBP14.98□□□□□ -0.01
PFDN5-210ENST00000550513 NKX1-1Q15270 411 aaPredicted RBP14.97□□□□□ -0.01
PFDN5-210ENST00000550513 EYA1Q99502 592 aa14.97□□□□□ -0.01
PFDN5-210ENST00000550513 POLKQ9UBT6 870 aa14.97□□□□□ -0.01
PFDN5-210ENST00000550513 N4BP2Q86UW6 1770 aaPredicted RBP14.97□□□□□ -0.01
PFDN5-210ENST00000550513 BRCA1P38398 1863 aaKnown RBP14.96□□□□□ -0.01
PFDN5-210ENST00000550513 TNNT2P45379 298 aaPredicted RBP14.96□□□□□ -0.01
PFDN5-210ENST00000550513 TJP1Q07157 1748 aa14.96□□□□□ -0.01
PFDN5-210ENST00000550513 PIGBQ92521 554 aa14.96□□□□□ -0.01
PFDN5-210ENST00000550513 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.96□□□□□ -0.01
PFDN5-210ENST00000550513 TMOD3Q9NYL9 352 aa14.96□□□□□ -0.01
PFDN5-210ENST00000550513 EIF4G2P78344 907 aaKnown RBP eCLIP14.95□□□□□ -0.02
PFDN5-210ENST00000550513 EIF4A2Q14240 407 aaKnown RBP14.95□□□□□ -0.02
PFDN5-210ENST00000550513 IFNL2Q8IZJ0 200 aa14.95□□□□□ -0.02
PFDN5-210ENST00000550513 MYH14Q7Z406 1995 aaKnown RBP14.94□□□□□ -0.02
PFDN5-210ENST00000550513 IGSF1Q8N6C5 1336 aa14.94□□□□□ -0.02
PFDN5-210ENST00000550513 PHF14O94880 888 aa14.94□□□□□ -0.02
PFDN5-210ENST00000550513 PHKG2P15735 406 aa14.94□□□□□ -0.02
PFDN5-210ENST00000550513 LOC102724428A0A0B4J2F2 783 aa14.93□□□□□ -0.02
PFDN5-210ENST00000550513 YBX3P16989 372 aaKnown RBP eCLIP14.93□□□□□ -0.02
PFDN5-210ENST00000550513 SIK1P57059 783 aa14.93□□□□□ -0.02
PFDN5-210ENST00000550513 AMIGO3Q86WK7 504 aa14.93□□□□□ -0.02
PFDN5-210ENST00000550513 LINC00116Q8NCU8 138 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms