RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 BRPF1P55201 1214 aaPredicted RBP18.67■□□□□ 0.58
RBFOX1-212ENST00000550418 ATP10BO94823 1461 aa18.67■□□□□ 0.58
RBFOX1-212ENST00000550418 PPFIBP1Q86W92 1011 aa18.66■□□□□ 0.58
RBFOX1-212ENST00000550418 RIC3Q7Z5B4 369 aa18.66■□□□□ 0.58
RBFOX1-212ENST00000550418 THEMISQ8N1K5 641 aaPredicted RBP18.66■□□□□ 0.58
RBFOX1-212ENST00000550418 FERMT3Q86UX7 667 aa18.66■□□□□ 0.58
RBFOX1-212ENST00000550418 RBM27Q9P2N5 1060 aaKnown RBP18.66■□□□□ 0.58
RBFOX1-212ENST00000550418 SFPQP23246 707 aaKnown RBP eCLIP18.66■□□□□ 0.58
RBFOX1-212ENST00000550418 ZKSCAN5Q9Y2L8 839 aa18.66■□□□□ 0.58
RBFOX1-212ENST00000550418 OFD1O75665 1012 aa18.65■□□□□ 0.58
RBFOX1-212ENST00000550418 MAP4K4O95819 1239 aaPredicted RBP18.65■□□□□ 0.58
RBFOX1-212ENST00000550418 UVSSAQ2YD98 709 aa18.65■□□□□ 0.58
RBFOX1-212ENST00000550418 RRAGDQ9NQL2 400 aaPredicted RBP18.65■□□□□ 0.58
RBFOX1-212ENST00000550418 MAPKBP1O60336 1514 aa18.65■□□□□ 0.58
RBFOX1-212ENST00000550418 ATP2B1P20020 1258 aa18.65■□□□□ 0.58
RBFOX1-212ENST00000550418 TXNDC2Q86VQ3 553 aa18.65■□□□□ 0.58
RBFOX1-212ENST00000550418 DHX29Q7Z478 1369 aaKnown RBP18.65■□□□□ 0.58
RBFOX1-212ENST00000550418 KIF14Q15058 1648 aa18.65■□□□□ 0.58
RBFOX1-212ENST00000550418 VPS53Q5VIR6 699 aa18.65■□□□□ 0.58
RBFOX1-212ENST00000550418 LRSAM1Q6UWE0 723 aa18.65■□□□□ 0.58
RBFOX1-212ENST00000550418 TBC1D9Q6ZT07 1266 aa18.65■□□□□ 0.58
RBFOX1-212ENST00000550418 AIMP1Q12904 312 aaKnown RBP18.64■□□□□ 0.57
RBFOX1-212ENST00000550418 CCDC102AQ96A19 550 aa18.64■□□□□ 0.57
RBFOX1-212ENST00000550418 RRP12Q5JTH9 1297 aaKnown RBP18.64■□□□□ 0.57
RBFOX1-212ENST00000550418 GAS2L2Q8NHY3 880 aa18.64■□□□□ 0.57
RBFOX1-212ENST00000550418 PSME1Q06323 249 aa18.64■□□□□ 0.57
RBFOX1-212ENST00000550418 NUTM2GQ5VZR2 741 aa18.64■□□□□ 0.57
RBFOX1-212ENST00000550418 CWC27Q6UX04 472 aaKnown RBP18.64■□□□□ 0.57
RBFOX1-212ENST00000550418 PROSER2Q86WR7 435 aaPredicted RBP18.64■□□□□ 0.57
RBFOX1-212ENST00000550418 SCAND2PQ9GZW5 306 aaPredicted RBP18.64■□□□□ 0.57
RBFOX1-212ENST00000550418 PLEKHH1Q9ULM0 1364 aa18.63■□□□□ 0.57
RBFOX1-212ENST00000550418 ALDH1L2Q3SY69 923 aa18.63■□□□□ 0.57
RBFOX1-212ENST00000550418 TRERF1Q96PN7 1200 aa18.63■□□□□ 0.57
RBFOX1-212ENST00000550418 DNAJC2Q99543 621 aaKnown RBP18.63■□□□□ 0.57
RBFOX1-212ENST00000550418 TRIM27P14373 513 aa18.63■□□□□ 0.57
RBFOX1-212ENST00000550418 HSP90AB3PQ58FF7 597 aa18.63■□□□□ 0.57
RBFOX1-212ENST00000550418 TMX4Q9H1E5 349 aaPredicted RBP18.63■□□□□ 0.57
RBFOX1-212ENST00000550418 GDPD2Q9HCC8 539 aa18.63■□□□□ 0.57
RBFOX1-212ENST00000550418 CLIP2Q9UDT6 1046 aa18.63■□□□□ 0.57
RBFOX1-212ENST00000550418 FCHSD2O94868 740 aa18.63■□□□□ 0.57
RBFOX1-212ENST00000550418 XBP1P17861 261 aa18.63■□□□□ 0.57
RBFOX1-212ENST00000550418 PIP4K2AP48426 406 aaPredicted RBP18.63■□□□□ 0.57
RBFOX1-212ENST00000550418 IL1RAPL2Q9NP60 686 aa18.62■□□□□ 0.57
RBFOX1-212ENST00000550418 CD109Q6YHK3 1445 aa18.62■□□□□ 0.57
RBFOX1-212ENST00000550418 GPRASP1Q5JY77 1395 aa18.62■□□□□ 0.57
RBFOX1-212ENST00000550418 SMTNL1A8MU46 457 aa18.62■□□□□ 0.57
RBFOX1-212ENST00000550418 CASTP20810 708 aaKnown RBP18.62■□□□□ 0.57
RBFOX1-212ENST00000550418 NCBP3Q53F19 620 aaKnown RBP18.62■□□□□ 0.57
RBFOX1-212ENST00000550418 HS1BP3Q53T59 392 aa18.62■□□□□ 0.57
RBFOX1-212ENST00000550418 DACH1Q9UI36 760 aa18.62■□□□□ 0.57
RBFOX1-212ENST00000550418 UGGT2Q9NYU1 1516 aa18.62■□□□□ 0.57
RBFOX1-212ENST00000550418 CCDC83Q8IWF9 413 aa18.62■□□□□ 0.57
RBFOX1-212ENST00000550418 EXOC6BQ9Y2D4 811 aa18.62■□□□□ 0.57
RBFOX1-212ENST00000550418 NOLC1Q14978 699 aaKnown RBP eCLIP18.61■□□□□ 0.57
RBFOX1-212ENST00000550418 BRMS1Q9HCU9 246 aa18.61■□□□□ 0.57
RBFOX1-212ENST00000550418 NEMFO60524 1076 aa18.61■□□□□ 0.57
RBFOX1-212ENST00000550418 RPRD2Q5VT52 1461 aaKnown RBP18.61■□□□□ 0.57
RBFOX1-212ENST00000550418 KIF21AQ7Z4S6 1674 aa18.61■□□□□ 0.57
RBFOX1-212ENST00000550418 KDM4AO75164 1064 aa18.6■□□□□ 0.57
RBFOX1-212ENST00000550418 URI1O94763 535 aaPredicted RBP18.6■□□□□ 0.57
RBFOX1-212ENST00000550418 SLC52A1Q9NWF4 448 aa18.6■□□□□ 0.57
RBFOX1-212ENST00000550418 POLR3GO15318 223 aaPredicted RBP18.6■□□□□ 0.57
RBFOX1-212ENST00000550418 HDGFL1Q5TGJ6 251 aa18.6■□□□□ 0.57
RBFOX1-212ENST00000550418 ZNHIT6Q9NWK9 470 aaKnown RBP18.6■□□□□ 0.57
RBFOX1-212ENST00000550418 MX1P20591 662 aa18.59■□□□□ 0.57
RBFOX1-212ENST00000550418 GTF2E1P29083 439 aaPredicted RBP18.59■□□□□ 0.57
RBFOX1-212ENST00000550418 GTF2F1P35269 517 aaKnown RBP eCLIP18.59■□□□□ 0.57
RBFOX1-212ENST00000550418 CFAP100Q494V2 611 aa18.59■□□□□ 0.57
RBFOX1-212ENST00000550418 SULT6B1Q6IMI4 303 aa18.59■□□□□ 0.57
RBFOX1-212ENST00000550418 CABP1Q9NZU7 370 aa18.59■□□□□ 0.57
RBFOX1-212ENST00000550418 SMARCA5O60264 1052 aaPredicted RBP18.59■□□□□ 0.57
RBFOX1-212ENST00000550418 ANO10Q9NW15 660 aa18.59■□□□□ 0.57
RBFOX1-212ENST00000550418 PCDHB15Q9Y5E8 787 aa18.59■□□□□ 0.57
RBFOX1-212ENST00000550418 SNX21Q969T3 373 aa18.59■□□□□ 0.57
RBFOX1-212ENST00000550418 GBP3Q9H0R5 595 aa18.59■□□□□ 0.57
RBFOX1-212ENST00000550418 ADGRL1O94910 1474 aa18.58■□□□□ 0.57
RBFOX1-212ENST00000550418 ADGRF5Q8IZF2 1346 aa18.58■□□□□ 0.57
RBFOX1-212ENST00000550418 HCLS1P14317 486 aaPredicted RBP18.58■□□□□ 0.57
RBFOX1-212ENST00000550418 NFE2L2Q16236 605 aa18.58■□□□□ 0.57
RBFOX1-212ENST00000550418 TIGD1Q96MW7 591 aa18.58■□□□□ 0.57
RBFOX1-212ENST00000550418 TRMT1Q9NXH9 659 aaKnown RBP18.58■□□□□ 0.57
RBFOX1-212ENST00000550418 SRGAP3O43295 1099 aa18.58■□□□□ 0.56
RBFOX1-212ENST00000550418 ZSCAN12O43309 604 aa18.58■□□□□ 0.56
RBFOX1-212ENST00000550418 CKAP2LQ8IYA6 745 aa18.58■□□□□ 0.56
RBFOX1-212ENST00000550418 SLC26A8Q96RN1 970 aa18.58■□□□□ 0.56
RBFOX1-212ENST00000550418 RAPGEF6Q8TEU7 1601 aa18.57■□□□□ 0.56
RBFOX1-212ENST00000550418 KRT32Q14532 448 aa18.57■□□□□ 0.56
RBFOX1-212ENST00000550418 NSD3Q9BZ95 1437 aa18.57■□□□□ 0.56
RBFOX1-212ENST00000550418 SH2B1Q9NRF2 756 aaPredicted RBP18.57■□□□□ 0.56
RBFOX1-212ENST00000550418 PAXBP1Q9Y5B6 917 aa18.57■□□□□ 0.56
RBFOX1-212ENST00000550418 ANKLE2Q86XL3 938 aa18.57■□□□□ 0.56
RBFOX1-212ENST00000550418 ABCC11Q96J66 1382 aa18.57■□□□□ 0.56
RBFOX1-212ENST00000550418 GOLGA6L10A6NI86 522 aa18.57■□□□□ 0.56
RBFOX1-212ENST00000550418 BMS1Q14692 1282 aaKnown RBP18.57■□□□□ 0.56
RBFOX1-212ENST00000550418 NOL10Q9BSC4 688 aaKnown RBP18.57■□□□□ 0.56
RBFOX1-212ENST00000550418 CCDC94Q9BW85 323 aaPredicted RBP18.57■□□□□ 0.56
RBFOX1-212ENST00000550418 MAGEC2Q9UBF1 373 aaPredicted RBP18.57■□□□□ 0.56
RBFOX1-212ENST00000550418 ARHGAP29Q52LW3 1261 aa18.56■□□□□ 0.56
RBFOX1-212ENST00000550418 KRT222Q8N1A0 295 aa18.56■□□□□ 0.56
RBFOX1-212ENST00000550418 ZNF830Q96NB3 372 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms