RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 TTC21AQ8NDW8 1320 aa9.72□□□□□ -0.85
CBX5-204ENST00000550411 A0A1W2PP64 1363 aa9.72□□□□□ -0.85
CBX5-204ENST00000550411 KTN1Q86UP2 1357 aaKnown RBP9.72□□□□□ -0.85
CBX5-204ENST00000550411 YY1P25490 414 aa9.71□□□□□ -0.86
CBX5-204ENST00000550411 PAXIP1Q6ZW49 1069 aaPredicted RBP9.71□□□□□ -0.86
CBX5-204ENST00000550411 ARHGEF25Q86VW2 580 aa9.71□□□□□ -0.86
CBX5-204ENST00000550411 MARCH10Q8NA82 808 aaPredicted RBP9.71□□□□□ -0.86
CBX5-204ENST00000550411 CCDC7Q96M83 1385 aa9.71□□□□□ -0.86
CBX5-204ENST00000550411 TNS2Q63HR2 1409 aa9.71□□□□□ -0.86
CBX5-204ENST00000550411 C5P01031 1676 aa9.71□□□□□ -0.86
CBX5-204ENST00000550411 RGL2O15211 777 aa9.7□□□□□ -0.86
CBX5-204ENST00000550411 SOX12O15370 315 aa9.7□□□□□ -0.86
CBX5-204ENST00000550411 CSB-PGBD3P0DP91 1061 aa9.7□□□□□ -0.86
CBX5-204ENST00000550411 PTF1AQ7RTS3 328 aa9.7□□□□□ -0.86
CBX5-204ENST00000550411 CARD10Q9BWT7 1032 aa9.7□□□□□ -0.86
CBX5-204ENST00000550411 ANO8Q9HCE9 1232 aaPredicted RBP9.7□□□□□ -0.86
CBX5-204ENST00000550411 TIMELESSQ9UNS1 1208 aa9.7□□□□□ -0.86
CBX5-204ENST00000550411 EDC4Q6P2E9 1401 aaKnown RBP9.7□□□□□ -0.86
CBX5-204ENST00000550411 EXOC5O00471 708 aa9.69□□□□□ -0.86
CBX5-204ENST00000550411 USP31Q70CQ4 1352 aa9.69□□□□□ -0.86
CBX5-204ENST00000550411 CFAP44Q96MT7 982 aa9.68□□□□□ -0.86
CBX5-204ENST00000550411 PUS7Q96PZ0 661 aaKnown RBP9.68□□□□□ -0.86
CBX5-204ENST00000550411 SLC12A5Q9H2X9 1139 aa9.68□□□□□ -0.86
CBX5-204ENST00000550411 UBR3Q6ZT12 1888 aa9.68□□□□□ -0.86
CBX5-204ENST00000550411 TXNRD1Q16881 649 aa9.67□□□□□ -0.86
CBX5-204ENST00000550411 NME9Q86XW9 330 aa9.67□□□□□ -0.86
CBX5-204ENST00000550411 CCER1Q8TC90 406 aaPredicted RBP9.67□□□□□ -0.86
CBX5-204ENST00000550411 PDGFDQ9GZP0 370 aaPredicted RBP9.67□□□□□ -0.86
CBX5-204ENST00000550411 STK32BQ9NY57 414 aa9.67□□□□□ -0.86
CBX5-204ENST00000550411 ANKRD36BQ8N2N9 1353 aa9.66□□□□□ -0.86
CBX5-204ENST00000550411 ANKRD26Q9UPS8 1709 aa9.66□□□□□ -0.86
CBX5-204ENST00000550411 SLC15A2Q16348 729 aa9.66□□□□□ -0.86
CBX5-204ENST00000550411 SSUH2Q9Y2M2 353 aa9.66□□□□□ -0.86
CBX5-204ENST00000550411 ERBB3P21860 1342 aa9.65□□□□□ -0.86
CBX5-204ENST00000550411 ZBTB7AO95365 584 aa9.65□□□□□ -0.86
CBX5-204ENST00000550411 TPRNQ4KMQ1 711 aa9.65□□□□□ -0.86
CBX5-204ENST00000550411 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.65□□□□□ -0.86
CBX5-204ENST00000550411 PKD1L3Q7Z443 1732 aa9.65□□□□□ -0.87
CBX5-204ENST00000550411 PTGER2P43116 358 aa9.64□□□□□ -0.87
CBX5-204ENST00000550411 TMC1Q8TDI8 760 aa9.64□□□□□ -0.87
CBX5-204ENST00000550411 ACSBG1Q96GR2 724 aa9.64□□□□□ -0.87
CBX5-204ENST00000550411 TOGARAM1Q9Y4F4 1720 aa9.64□□□□□ -0.87
CBX5-204ENST00000550411 CCDC88AQ3V6T2 1871 aa9.64□□□□□ -0.87
CBX5-204ENST00000550411 IL2RBP14784 551 aa9.63□□□□□ -0.87
CBX5-204ENST00000550411 HDGFL2Q7Z4V5 671 aaPredicted RBP9.63□□□□□ -0.87
CBX5-204ENST00000550411 NLRP2Q9NX02 1062 aa9.63□□□□□ -0.87
CBX5-204ENST00000550411 TMF1P82094 1093 aa9.62□□□□□ -0.87
CBX5-204ENST00000550411 PLCD3Q8N3E9 789 aa9.62□□□□□ -0.87
CBX5-204ENST00000550411 ANKRD24Q8TF21 1146 aa9.62□□□□□ -0.87
CBX5-204ENST00000550411 MTFR1LQ9H019 292 aa9.62□□□□□ -0.87
CBX5-204ENST00000550411 TERF2IPQ9NYB0 399 aa9.62□□□□□ -0.87
CBX5-204ENST00000550411 UTRNP46939 3433 aa9.62□□□□□ -0.87
CBX5-204ENST00000550411 HSPA5P11021 654 aaKnown RBP9.61□□□□□ -0.87
CBX5-204ENST00000550411 SGIP1Q9BQI5 828 aa9.61□□□□□ -0.87
CBX5-204ENST00000550411 SYT17Q9BSW7 474 aa9.61□□□□□ -0.87
CBX5-204ENST00000550411 FHDC1Q9C0D6 1143 aaPredicted RBP9.61□□□□□ -0.87
CBX5-204ENST00000550411 BRCA1P38398 1863 aaKnown RBP9.6□□□□□ -0.87
CBX5-204ENST00000550411 NSD3Q9BZ95 1437 aa9.6□□□□□ -0.87
CBX5-204ENST00000550411 TSHZ2Q9NRE2 1034 aa9.6□□□□□ -0.87
CBX5-204ENST00000550411 KIF13BQ9NQT8 1826 aa9.6□□□□□ -0.87
CBX5-204ENST00000550411 N4BP2Q86UW6 1770 aaPredicted RBP9.6□□□□□ -0.87
CBX5-204ENST00000550411 SPDYE2BA6NHP3 402 aa9.59□□□□□ -0.87
CBX5-204ENST00000550411 SPDYE6P0CI01 402 aa9.59□□□□□ -0.87
CBX5-204ENST00000550411 SPDYE2Q495Y8 402 aa9.59□□□□□ -0.87
CBX5-204ENST00000550411 ARXQ96QS3 562 aa9.59□□□□□ -0.87
CBX5-204ENST00000550411 CARD14Q9BXL6 1004 aa9.59□□□□□ -0.87
CBX5-204ENST00000550411 C4BP0C0L5 1744 aa9.59□□□□□ -0.87
CBX5-204ENST00000550411 DSG3P32926 999 aa9.58□□□□□ -0.88
CBX5-204ENST00000550411 SPRYD3Q8NCJ5 442 aa9.58□□□□□ -0.88
CBX5-204ENST00000550411 IP6K1Q92551 441 aa9.58□□□□□ -0.88
CBX5-204ENST00000550411 LRRC4BQ9NT99 713 aa9.58□□□□□ -0.88
CBX5-204ENST00000550411 MAP3K5Q99683 1374 aa9.58□□□□□ -0.88
CBX5-204ENST00000550411 MAP3K19Q56UN5 1328 aa9.57□□□□□ -0.88
CBX5-204ENST00000550411 COL5A3P25940 1745 aaPredicted RBP9.57□□□□□ -0.88
CBX5-204ENST00000550411 ARFGEF1Q9Y6D6 1849 aa9.57□□□□□ -0.88
CBX5-204ENST00000550411 FYB1O15117 783 aa9.57□□□□□ -0.88
CBX5-204ENST00000550411 FBLN1P23142 703 aa9.57□□□□□ -0.88
CBX5-204ENST00000550411 ZNF827Q17R98 1081 aa9.57□□□□□ -0.88
CBX5-204ENST00000550411 ZNF784Q8NCA9 323 aaPredicted RBP9.57□□□□□ -0.88
CBX5-204ENST00000550411 DDX54Q8TDD1 881 aaKnown RBP9.57□□□□□ -0.88
CBX5-204ENST00000550411 LTV1Q96GA3 475 aaPredicted RBP9.57□□□□□ -0.88
CBX5-204ENST00000550411 SBF1O95248 1867 aa9.57□□□□□ -0.88
CBX5-204ENST00000550411 MYH14Q7Z406 1995 aaKnown RBP9.57□□□□□ -0.88
CBX5-204ENST00000550411 RTL1A6NKG5 1358 aa9.56□□□□□ -0.88
CBX5-204ENST00000550411 EIF4G2P78344 907 aaKnown RBP eCLIP9.56□□□□□ -0.88
CBX5-204ENST00000550411 SLC27A3Q5K4L6 730 aa9.56□□□□□ -0.88
CBX5-204ENST00000550411 SLC16A10Q8TF71 515 aa9.56□□□□□ -0.88
CBX5-204ENST00000550411 AKT1S1Q96B36 256 aa9.56□□□□□ -0.88
CBX5-204ENST00000550411 GGNBP2Q9H3C7 697 aa9.56□□□□□ -0.88
CBX5-204ENST00000550411 MEGF6O75095 1541 aa9.56□□□□□ -0.88
CBX5-204ENST00000550411 HOXC9P31274 260 aa9.55□□□□□ -0.88
CBX5-204ENST00000550411 CDCA8Q53HL2 280 aa9.55□□□□□ -0.88
CBX5-204ENST00000550411 POTEHQ6S545 545 aa9.55□□□□□ -0.88
CBX5-204ENST00000550411 SYTL4Q96C24 671 aaPredicted RBP9.55□□□□□ -0.88
CBX5-204ENST00000550411 COG3Q96JB2 828 aa9.55□□□□□ -0.88
CBX5-204ENST00000550411 SCN11AQ9UI33 1791 aa9.55□□□□□ -0.88
CBX5-204ENST00000550411 PNPLA7Q6ZV29 1317 aa9.55□□□□□ -0.88
CBX5-204ENST00000550411 C4AP0C0L4 1744 aa9.54□□□□□ -0.88
CBX5-204ENST00000550411 KIAA1551Q9HCM1 1747 aa9.54□□□□□ -0.88
CBX5-204ENST00000550411 POLD1P28340 1107 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms