RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 PPP1R1BQ9UD71 204 aaPredicted RBP18.68■□□□□ 0.58
CACNB3-216ENST00000550391 CCDC9Q9Y3X0 531 aaKnown RBP18.68■□□□□ 0.58
CACNB3-216ENST00000550391 NWD2Q9ULI1 1742 aa18.67■□□□□ 0.58
CACNB3-216ENST00000550391 PRKAR2BP31323 418 aa18.67■□□□□ 0.58
CACNB3-216ENST00000550391 A0A0G2JS52 829 aa18.65■□□□□ 0.58
CACNB3-216ENST00000550391 MYT1Q01538 1121 aa18.65■□□□□ 0.58
CACNB3-216ENST00000550391 BTG4Q9NY30 223 aa18.65■□□□□ 0.58
CACNB3-216ENST00000550391 WDR17Q8IZU2 1322 aa18.65■□□□□ 0.58
CACNB3-216ENST00000550391 NRAPQ86VF7 1730 aa18.65■□□□□ 0.58
CACNB3-216ENST00000550391 APAF1O14727 1248 aa18.64■□□□□ 0.57
CACNB3-216ENST00000550391 NEFMP07197 916 aa18.64■□□□□ 0.57
CACNB3-216ENST00000550391 CSB-PGBD3P0DP91 1061 aa18.64■□□□□ 0.57
CACNB3-216ENST00000550391 USHBP1Q8N6Y0 703 aa18.64■□□□□ 0.57
CACNB3-216ENST00000550391 EZH2Q15910 746 aaKnown RBP18.63■□□□□ 0.57
CACNB3-216ENST00000550391 TCP11L2Q8N4U5 519 aa18.63■□□□□ 0.57
CACNB3-216ENST00000550391 NGEFQ8N5V2 710 aa18.63■□□□□ 0.57
CACNB3-216ENST00000550391 SPON1Q9HCB6 807 aa18.63■□□□□ 0.57
CACNB3-216ENST00000550391 MAPK8IP3Q9UPT6 1336 aa18.63■□□□□ 0.57
CACNB3-216ENST00000550391 PHACTR3Q96KR7 559 aa18.62■□□□□ 0.57
CACNB3-216ENST00000550391 NLRP2Q9NX02 1062 aa18.62■□□□□ 0.57
CACNB3-216ENST00000550391 ZBED9Q6R2W3 1325 aa18.62■□□□□ 0.57
CACNB3-216ENST00000550391 EVA1CP58658 441 aa18.61■□□□□ 0.57
CACNB3-216ENST00000550391 STRN4Q9NRL3 753 aa18.61■□□□□ 0.57
CACNB3-216ENST00000550391 CRB1P82279 1406 aa18.6■□□□□ 0.57
CACNB3-216ENST00000550391 NCBP3Q53F19 620 aaKnown RBP18.6■□□□□ 0.57
CACNB3-216ENST00000550391 LARP1Q6PKG0 1096 aaKnown RBP18.6■□□□□ 0.57
CACNB3-216ENST00000550391 TOM1L2Q6ZVM7 507 aa18.6■□□□□ 0.57
CACNB3-216ENST00000550391 CAMKK2Q96RR4 588 aa18.6■□□□□ 0.57
CACNB3-216ENST00000550391 TMPOP42166 694 aaKnown RBP18.59■□□□□ 0.57
CACNB3-216ENST00000550391 NBPF14Q5TI25 921 aa18.59■□□□□ 0.57
CACNB3-216ENST00000550391 CARD10Q9BWT7 1032 aa18.59■□□□□ 0.57
CACNB3-216ENST00000550391 KCNQ2O43526 872 aa18.57■□□□□ 0.56
CACNB3-216ENST00000550391 RRP7AQ9Y3A4 280 aaKnown RBP18.57■□□□□ 0.56
CACNB3-216ENST00000550391 SALL2Q9Y467 1007 aaPredicted RBP18.57■□□□□ 0.56
CACNB3-216ENST00000550391 DLG5Q8TDM6 1919 aa18.57■□□□□ 0.56
CACNB3-216ENST00000550391 PLEKHG2Q9H7P9 1386 aa18.56■□□□□ 0.56
CACNB3-216ENST00000550391 UTRNP46939 3433 aa18.56■□□□□ 0.56
CACNB3-216ENST00000550391 NFE2L2Q16236 605 aa18.56■□□□□ 0.56
CACNB3-216ENST00000550391 FAM98CQ17RN3 349 aaKnown RBP18.56■□□□□ 0.56
CACNB3-216ENST00000550391 CCDC27Q2M243 656 aa18.56■□□□□ 0.56
CACNB3-216ENST00000550391 ZNF521Q96K83 1311 aa18.55■□□□□ 0.56
CACNB3-216ENST00000550391 NEUROD2Q15784 382 aa18.55■□□□□ 0.56
CACNB3-216ENST00000550391 MTHFSDQ2M296 383 aaKnown RBP18.55■□□□□ 0.56
CACNB3-216ENST00000550391 PARP4Q9UKK3 1724 aaKnown RBP18.54■□□□□ 0.56
CACNB3-216ENST00000550391 MEGF6O75095 1541 aa18.54■□□□□ 0.56
CACNB3-216ENST00000550391 RIPK4P57078 832 aa18.54■□□□□ 0.56
CACNB3-216ENST00000550391 TNS1Q9HBL0 1735 aaKnown RBP18.54■□□□□ 0.56
CACNB3-216ENST00000550391 GAS2L2Q8NHY3 880 aa18.53■□□□□ 0.56
CACNB3-216ENST00000550391 RAPGEF4Q8WZA2 1011 aa18.53■□□□□ 0.56
CACNB3-216ENST00000550391 TRIM35Q9UPQ4 493 aa18.53■□□□□ 0.56
CACNB3-216ENST00000550391 WNK3Q9BYP7 1800 aa18.53■□□□□ 0.56
CACNB3-216ENST00000550391 PKD1L3Q7Z443 1732 aa18.52■□□□□ 0.56
CACNB3-216ENST00000550391 CENPBP07199 599 aaPredicted RBP18.52■□□□□ 0.56
CACNB3-216ENST00000550391 TATP17735 454 aaPredicted RBP18.52■□□□□ 0.56
CACNB3-216ENST00000550391 AMOTQ4VCS5 1084 aa18.52■□□□□ 0.56
CACNB3-216ENST00000550391 WWC1Q8IX03 1113 aa18.52■□□□□ 0.56
CACNB3-216ENST00000550391 OVOS2A0A0G2JMS6 1433 aa18.51■□□□□ 0.55
CACNB3-216ENST00000550391 PLEKHO1Q53GL0 409 aaPredicted RBP18.51■□□□□ 0.55
CACNB3-216ENST00000550391 FAM196AQ6ZSG2 479 aa18.51■□□□□ 0.55
CACNB3-216ENST00000550391 SPATA31A1Q5TZJ5 1347 aa18.5■□□□□ 0.55
CACNB3-216ENST00000550391 SPATA31A5Q5VU36 1347 aa18.5■□□□□ 0.55
CACNB3-216ENST00000550391 SPATA31A7Q8IWB4 1347 aa18.5■□□□□ 0.55
CACNB3-216ENST00000550391 APBA3O96018 575 aa18.5■□□□□ 0.55
CACNB3-216ENST00000550391 IL2RBP14784 551 aa18.5■□□□□ 0.55
CACNB3-216ENST00000550391 LMOD3Q0VAK6 560 aa18.5■□□□□ 0.55
CACNB3-216ENST00000550391 PDE3BQ13370 1112 aa18.5■□□□□ 0.55
CACNB3-216ENST00000550391 FAM182BQ5T319 152 aa18.5■□□□□ 0.55
CACNB3-216ENST00000550391 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.5■□□□□ 0.55
CACNB3-216ENST00000550391 THSD7AQ9UPZ6 1657 aa18.5■□□□□ 0.55
CACNB3-216ENST00000550391 CEP350Q5VT06 3117 aa18.49■□□□□ 0.55
CACNB3-216ENST00000550391 USP35Q9P2H5 1018 aa18.49■□□□□ 0.55
CACNB3-216ENST00000550391 THRAP3Q9Y2W1 955 aaKnown RBP18.49■□□□□ 0.55
CACNB3-216ENST00000550391 TRIM37O94972 964 aa18.48■□□□□ 0.55
CACNB3-216ENST00000550391 WDR63Q8IWG1 891 aa18.48■□□□□ 0.55
CACNB3-216ENST00000550391 MAP3K5Q99683 1374 aa18.47■□□□□ 0.55
CACNB3-216ENST00000550391 HTATSF1O43719 755 aaKnown RBP18.47■□□□□ 0.55
CACNB3-216ENST00000550391 SPG7Q9UQ90 795 aa18.47■□□□□ 0.55
CACNB3-216ENST00000550391 SHANK3Q9BYB0 1731 aa18.46■□□□□ 0.55
CACNB3-216ENST00000550391 GNAT3A8MTJ3 354 aa18.46■□□□□ 0.55
CACNB3-216ENST00000550391 GOLGA2Q08379 1002 aa18.46■□□□□ 0.55
CACNB3-216ENST00000550391 AKAP4Q5JQC9 854 aa18.46■□□□□ 0.55
CACNB3-216ENST00000550391 ZNF530Q6P9A1 599 aaPredicted RBP18.46■□□□□ 0.55
CACNB3-216ENST00000550391 CHD4Q14839 1912 aa18.46■□□□□ 0.55
CACNB3-216ENST00000550391 BARGINQ6ZT62 677 aa18.45■□□□□ 0.54
CACNB3-216ENST00000550391 RREB1Q92766 1687 aa18.44■□□□□ 0.54
CACNB3-216ENST00000550391 ZCRB1Q8TBF4 217 aaKnown RBP18.44■□□□□ 0.54
CACNB3-216ENST00000550391 CDCA7LQ96GN5 454 aa18.44■□□□□ 0.54
CACNB3-216ENST00000550391 CDCA7Q9BWT1 371 aaPredicted RBP18.44■□□□□ 0.54
CACNB3-216ENST00000550391 LRRC37A3O60309 1634 aa18.44■□□□□ 0.54
CACNB3-216ENST00000550391 GIGYF1O75420 1035 aaPredicted RBP18.43■□□□□ 0.54
CACNB3-216ENST00000550391 CALD1Q05682 793 aaKnown RBP18.43■□□□□ 0.54
CACNB3-216ENST00000550391 SLFN5Q08AF3 891 aa18.43■□□□□ 0.54
CACNB3-216ENST00000550391 DCTN1Q14203 1278 aa18.43■□□□□ 0.54
CACNB3-216ENST00000550391 C1orf141Q5JVX7 400 aa18.43■□□□□ 0.54
CACNB3-216ENST00000550391 RTF1Q92541 710 aaKnown RBP18.43■□□□□ 0.54
CACNB3-216ENST00000550391 SPINK5Q9NQ38 1064 aaPredicted RBP18.43■□□□□ 0.54
CACNB3-216ENST00000550391 ADAMTS7Q9UKP4 1686 aa18.43■□□□□ 0.54
CACNB3-216ENST00000550391 IL16Q14005 1332 aa18.43■□□□□ 0.54
CACNB3-216ENST00000550391 VIRMAQ69YN4 1812 aaKnown RBP18.42■□□□□ 0.54
CACNB3-216ENST00000550391 E9PSI1 815 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms