RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 HSPA5P11021 654 aaKnown RBP14.98□□□□□ -0.01
VTI1BP3-201ENST00000550220 PRIM1P49642 420 aaKnown RBP14.98□□□□□ -0.01
VTI1BP3-201ENST00000550220 SYTL4Q96C24 671 aaPredicted RBP14.98□□□□□ -0.01
VTI1BP3-201ENST00000550220 PPM1GO15355 546 aaPredicted RBP14.97□□□□□ -0.01
VTI1BP3-201ENST00000550220 PCDH11XQ9BZA7 1347 aa14.96□□□□□ -0.01
VTI1BP3-201ENST00000550220 PCDH11YQ9BZA8 1340 aa14.96□□□□□ -0.01
VTI1BP3-201ENST00000550220 MTFR1LQ9H019 292 aa14.96□□□□□ -0.01
VTI1BP3-201ENST00000550220 EMILIN1Q9Y6C2 1016 aa14.96□□□□□ -0.01
VTI1BP3-201ENST00000550220 USHBP1Q8N6Y0 703 aa14.95□□□□□ -0.02
VTI1BP3-201ENST00000550220 NHSQ6T4R5 1651 aa14.94□□□□□ -0.02
VTI1BP3-201ENST00000550220 ZBTB7AO95365 584 aa14.94□□□□□ -0.02
VTI1BP3-201ENST00000550220 PANK3Q9H999 370 aa14.94□□□□□ -0.02
VTI1BP3-201ENST00000550220 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.94□□□□□ -0.02
VTI1BP3-201ENST00000550220 POLKQ9UBT6 870 aa14.94□□□□□ -0.02
VTI1BP3-201ENST00000550220 SPG7Q9UQ90 795 aa14.94□□□□□ -0.02
VTI1BP3-201ENST00000550220 MEGF6O75095 1541 aa14.93□□□□□ -0.02
VTI1BP3-201ENST00000550220 SLC16A10Q8TF71 515 aa14.93□□□□□ -0.02
VTI1BP3-201ENST00000550220 LRRC4BQ9NT99 713 aa14.93□□□□□ -0.02
VTI1BP3-201ENST00000550220 PDGFDQ9GZP0 370 aaPredicted RBP14.92□□□□□ -0.02
VTI1BP3-201ENST00000550220 NSD2O96028 1365 aa14.92□□□□□ -0.02
VTI1BP3-201ENST00000550220 PTGER2P43116 358 aa14.91□□□□□ -0.02
VTI1BP3-201ENST00000550220 AKT1S1Q96B36 256 aa14.91□□□□□ -0.02
VTI1BP3-201ENST00000550220 CCNL1Q9UK58 526 aaPredicted RBP14.91□□□□□ -0.02
VTI1BP3-201ENST00000550220 ATF5Q9Y2D1 282 aaPredicted RBP14.91□□□□□ -0.02
VTI1BP3-201ENST00000550220 KNSTRNQ9Y448 316 aa14.91□□□□□ -0.02
VTI1BP3-201ENST00000550220 KAT6BQ8WYB5 2073 aa14.9□□□□□ -0.02
VTI1BP3-201ENST00000550220 SMARCC1Q92922 1105 aaPredicted RBP14.9□□□□□ -0.02
VTI1BP3-201ENST00000550220 EYA1Q99502 592 aa14.9□□□□□ -0.02
VTI1BP3-201ENST00000550220 TFCP2L1Q9NZI6 479 aa14.9□□□□□ -0.02
VTI1BP3-201ENST00000550220 PLEKHG2Q9H7P9 1386 aa14.89□□□□□ -0.03
VTI1BP3-201ENST00000550220 NKX1-1Q15270 411 aaPredicted RBP14.89□□□□□ -0.03
VTI1BP3-201ENST00000550220 KIF20BQ96Q89 1820 aa14.89□□□□□ -0.03
VTI1BP3-201ENST00000550220 CYP27B1O15528 508 aa14.88□□□□□ -0.03
VTI1BP3-201ENST00000550220 TNNT2P45379 298 aaPredicted RBP14.88□□□□□ -0.03
VTI1BP3-201ENST00000550220 ZNF827Q17R98 1081 aa14.88□□□□□ -0.03
VTI1BP3-201ENST00000550220 MPRIPQ6WCQ1 1025 aa14.88□□□□□ -0.03
VTI1BP3-201ENST00000550220 MORC1Q86VD1 984 aa14.88□□□□□ -0.03
VTI1BP3-201ENST00000550220 MYOM1P52179 1685 aa14.87□□□□□ -0.03
VTI1BP3-201ENST00000550220 NCAPD2Q15021 1401 aa14.87□□□□□ -0.03
VTI1BP3-201ENST00000550220 POLD1P28340 1107 aa14.87□□□□□ -0.03
VTI1BP3-201ENST00000550220 IFNL2Q8IZJ0 200 aa14.87□□□□□ -0.03
VTI1BP3-201ENST00000550220 ARXQ96QS3 562 aa14.87□□□□□ -0.03
VTI1BP3-201ENST00000550220 EIF4A2Q14240 407 aaKnown RBP14.86□□□□□ -0.03
VTI1BP3-201ENST00000550220 FLAD1Q8NFF5 587 aa14.86□□□□□ -0.03
VTI1BP3-201ENST00000550220 SGIP1Q9BQI5 828 aa14.86□□□□□ -0.03
VTI1BP3-201ENST00000550220 BTAF1O14981 1849 aa14.86□□□□□ -0.03
VTI1BP3-201ENST00000550220 SYT17Q9BSW7 474 aa14.85□□□□□ -0.03
VTI1BP3-201ENST00000550220 CASZ1Q86V15 1759 aa14.85□□□□□ -0.03
VTI1BP3-201ENST00000550220 HSP90AB1P08238 724 aaKnown RBP14.84□□□□□ -0.03
VTI1BP3-201ENST00000550220 AMOTQ4VCS5 1084 aa14.84□□□□□ -0.03
VTI1BP3-201ENST00000550220 FHDC1Q9C0D6 1143 aaPredicted RBP14.84□□□□□ -0.03
VTI1BP3-201ENST00000550220 PNPLA7Q6ZV29 1317 aa14.84□□□□□ -0.03
VTI1BP3-201ENST00000550220 KCNQ4P56696 695 aa14.83□□□□□ -0.04
VTI1BP3-201ENST00000550220 PLEKHO1Q53GL0 409 aaPredicted RBP14.83□□□□□ -0.04
VTI1BP3-201ENST00000550220 PIGBQ92521 554 aa14.83□□□□□ -0.04
VTI1BP3-201ENST00000550220 TMOD3Q9NYL9 352 aa14.83□□□□□ -0.04
VTI1BP3-201ENST00000550220 PAPPAQ13219 1627 aa14.83□□□□□ -0.04
VTI1BP3-201ENST00000550220 PALLDQ8WX93 1383 aa14.83□□□□□ -0.04
VTI1BP3-201ENST00000550220 PHKG2P15735 406 aa14.82□□□□□ -0.04
VTI1BP3-201ENST00000550220 IGSF1Q8N6C5 1336 aa14.82□□□□□ -0.04
VTI1BP3-201ENST00000550220 MAP3K5Q99683 1374 aa14.82□□□□□ -0.04
VTI1BP3-201ENST00000550220 RGPD2P0DJD1 1756 aa14.81□□□□□ -0.04
VTI1BP3-201ENST00000550220 YY1P25490 414 aa14.81□□□□□ -0.04
VTI1BP3-201ENST00000550220 KIF7Q2M1P5 1343 aa14.81□□□□□ -0.04
VTI1BP3-201ENST00000550220 ERVV-2B6SEH9 535 aa14.8□□□□□ -0.04
VTI1BP3-201ENST00000550220 MSH5O43196 834 aa14.8□□□□□ -0.04
VTI1BP3-201ENST00000550220 AMER1Q5JTC6 1135 aaPredicted RBP14.8□□□□□ -0.04
VTI1BP3-201ENST00000550220 DCAF5Q96JK2 942 aa14.8□□□□□ -0.04
VTI1BP3-201ENST00000550220 AK7Q96M32 723 aa14.79□□□□□ -0.04
VTI1BP3-201ENST00000550220 DOT1LQ8TEK3 1739 aa14.78□□□□□ -0.04
VTI1BP3-201ENST00000550220 ANKRD26Q9UPS8 1709 aa14.78□□□□□ -0.04
VTI1BP3-201ENST00000550220 LOC102724428A0A0B4J2F2 783 aa14.78□□□□□ -0.04
VTI1BP3-201ENST00000550220 SIK1P57059 783 aa14.78□□□□□ -0.04
VTI1BP3-201ENST00000550220 COL23A1Q86Y22 540 aaPredicted RBP14.78□□□□□ -0.04
VTI1BP3-201ENST00000550220 MAP2P11137 1827 aaKnown RBP14.78□□□□□ -0.04
VTI1BP3-201ENST00000550220 SHANK3Q9BYB0 1731 aa14.78□□□□□ -0.04
VTI1BP3-201ENST00000550220 C1orf141Q5JVX7 400 aa14.77□□□□□ -0.05
VTI1BP3-201ENST00000550220 PER1O15534 1290 aaPredicted RBP14.76□□□□□ -0.05
VTI1BP3-201ENST00000550220 IL13P35225 146 aa14.76□□□□□ -0.05
VTI1BP3-201ENST00000550220 LY75O60449 1722 aa14.75□□□□□ -0.05
VTI1BP3-201ENST00000550220 ATP6V1AP38606 617 aa14.75□□□□□ -0.05
VTI1BP3-201ENST00000550220 MTHFSP49914 203 aa14.75□□□□□ -0.05
VTI1BP3-201ENST00000550220 CABP4P57796 275 aa14.75□□□□□ -0.05
VTI1BP3-201ENST00000550220 SULT6B1Q6IMI4 303 aa14.75□□□□□ -0.05
VTI1BP3-201ENST00000550220 ZNF530Q6P9A1 599 aaPredicted RBP14.75□□□□□ -0.05
VTI1BP3-201ENST00000550220 ASAP1Q9ULH1 1129 aa14.75□□□□□ -0.05
VTI1BP3-201ENST00000550220 PKD1L3Q7Z443 1732 aa14.75□□□□□ -0.05
VTI1BP3-201ENST00000550220 SSFA2P28290 1259 aa14.74□□□□□ -0.05
VTI1BP3-201ENST00000550220 GPR162Q16538 588 aa14.74□□□□□ -0.05
VTI1BP3-201ENST00000550220 ATG3Q9NT62 314 aa14.74□□□□□ -0.05
VTI1BP3-201ENST00000550220 KLHL34Q8N239 644 aa14.73□□□□□ -0.05
VTI1BP3-201ENST00000550220 KDRP35968 1356 aa14.73□□□□□ -0.05
VTI1BP3-201ENST00000550220 NPC1L1Q9UHC9 1359 aa14.73□□□□□ -0.05
VTI1BP3-201ENST00000550220 QSER1Q2KHR3 1735 aa14.72□□□□□ -0.05
VTI1BP3-201ENST00000550220 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.72□□□□□ -0.05
VTI1BP3-201ENST00000550220 CD2APQ9Y5K6 639 aa14.72□□□□□ -0.05
VTI1BP3-201ENST00000550220 DIAPH1O60610 1272 aaKnown RBP14.71□□□□□ -0.05
VTI1BP3-201ENST00000550220 CC2D1BQ5T0F9 858 aaKnown RBP14.71□□□□□ -0.05
VTI1BP3-201ENST00000550220 AEBP1Q8IUX7 1158 aa14.71□□□□□ -0.05
VTI1BP3-201ENST00000550220 LINC00116Q8NCU8 138 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms