RNA–Protein interactions for RNA: ENST00000550146.5

TMEM106C-213, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 663 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-213ENST00000550146 POLKQ9UBT6 870 aa8.75□□□□□ -1.01
TMEM106C-213ENST00000550146 RGPD3A6NKT7 1758 aaPredicted RBP8.75□□□□□ -1.01
TMEM106C-213ENST00000550146 RGPD4Q7Z3J3 1758 aa8.75□□□□□ -1.01
TMEM106C-213ENST00000550146 SHANK3Q9BYB0 1731 aa8.74□□□□□ -1.01
TMEM106C-213ENST00000550146 NBPF14Q5TI25 921 aa8.74□□□□□ -1.01
TMEM106C-213ENST00000550146 DCAF8L1A6NGE4 600 aa8.73□□□□□ -1.01
TMEM106C-213ENST00000550146 PLSCR1O15162 318 aa8.73□□□□□ -1.01
TMEM106C-213ENST00000550146 ACSBG1Q96GR2 724 aa8.73□□□□□ -1.01
TMEM106C-213ENST00000550146 NUP188Q5SRE5 1749 aa8.73□□□□□ -1.01
TMEM106C-213ENST00000550146 MEGF6O75095 1541 aa8.72□□□□□ -1.01
TMEM106C-213ENST00000550146 PSDA5PKW4 1024 aaPredicted RBP8.72□□□□□ -1.01
TMEM106C-213ENST00000550146 KCNQ2O43526 872 aa8.72□□□□□ -1.01
TMEM106C-213ENST00000550146 AMER1Q5JTC6 1135 aaPredicted RBP8.72□□□□□ -1.01
TMEM106C-213ENST00000550146 PTF1AQ7RTS3 328 aa8.72□□□□□ -1.01
TMEM106C-213ENST00000550146 NHSQ6T4R5 1651 aa8.72□□□□□ -1.01
TMEM106C-213ENST00000550146 PER1O15534 1290 aaPredicted RBP8.71□□□□□ -1.02
TMEM106C-213ENST00000550146 CNGB1Q14028 1251 aaPredicted RBP8.71□□□□□ -1.02
TMEM106C-213ENST00000550146 EIF4A2Q14240 407 aaKnown RBP8.71□□□□□ -1.02
TMEM106C-213ENST00000550146 R3HDM1Q15032 1099 aaKnown RBP8.71□□□□□ -1.02
TMEM106C-213ENST00000550146 CC2D1BQ5T0F9 858 aaKnown RBP8.71□□□□□ -1.02
TMEM106C-213ENST00000550146 SYTL4Q96C24 671 aaPredicted RBP8.71□□□□□ -1.02
TMEM106C-213ENST00000550146 EYA1Q99502 592 aa8.71□□□□□ -1.02
TMEM106C-213ENST00000550146 SPG7Q9UQ90 795 aa8.71□□□□□ -1.02
TMEM106C-213ENST00000550146 PCDH11XQ9BZA7 1347 aa8.71□□□□□ -1.02
TMEM106C-213ENST00000550146 PCDH11YQ9BZA8 1340 aa8.71□□□□□ -1.02
TMEM106C-213ENST00000550146 BTAF1O14981 1849 aa8.7□□□□□ -1.02
TMEM106C-213ENST00000550146 NCAPD2Q15021 1401 aa8.7□□□□□ -1.02
TMEM106C-213ENST00000550146 PRIM1P49642 420 aaKnown RBP8.69□□□□□ -1.02
TMEM106C-213ENST00000550146 TXNRD1Q16881 649 aa8.69□□□□□ -1.02
TMEM106C-213ENST00000550146 PKD1L3Q7Z443 1732 aa8.68□□□□□ -1.02
TMEM106C-213ENST00000550146 MTHFSP49914 203 aa8.68□□□□□ -1.02
TMEM106C-213ENST00000550146 RNF39Q9H2S5 420 aa8.68□□□□□ -1.02
TMEM106C-213ENST00000550146 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.68□□□□□ -1.02
TMEM106C-213ENST00000550146 NPC1L1Q9UHC9 1359 aa8.68□□□□□ -1.02
TMEM106C-213ENST00000550146 ITGB4P16144 1822 aa8.67□□□□□ -1.02
TMEM106C-213ENST00000550146 PLEKHO1Q53GL0 409 aaPredicted RBP8.67□□□□□ -1.02
TMEM106C-213ENST00000550146 IFNL2Q8IZJ0 200 aa8.67□□□□□ -1.02
TMEM106C-213ENST00000550146 PROM2Q8N271 834 aa8.67□□□□□ -1.02
TMEM106C-213ENST00000550146 IGSF1Q8N6C5 1336 aa8.67□□□□□ -1.02
TMEM106C-213ENST00000550146 DOT1LQ8TEK3 1739 aa8.67□□□□□ -1.02
TMEM106C-213ENST00000550146 STK32BQ9NY57 414 aa8.67□□□□□ -1.02
TMEM106C-213ENST00000550146 LRP5O75197 1615 aa8.66□□□□□ -1.02
TMEM106C-213ENST00000550146 CYP27B1O15528 508 aa8.66□□□□□ -1.02
TMEM106C-213ENST00000550146 DIAPH1O60610 1272 aaKnown RBP8.66□□□□□ -1.02
TMEM106C-213ENST00000550146 IL13P35225 146 aa8.66□□□□□ -1.02
TMEM106C-213ENST00000550146 AMOTQ4VCS5 1084 aa8.66□□□□□ -1.02
TMEM106C-213ENST00000550146 SULT6B1Q6IMI4 303 aa8.66□□□□□ -1.02
TMEM106C-213ENST00000550146 MPRIPQ6WCQ1 1025 aa8.66□□□□□ -1.02
TMEM106C-213ENST00000550146 LY75O60449 1722 aa8.66□□□□□ -1.02
TMEM106C-213ENST00000550146 PLEKHG2Q9H7P9 1386 aa8.65□□□□□ -1.02
TMEM106C-213ENST00000550146 PHKG2P15735 406 aa8.65□□□□□ -1.02
TMEM106C-213ENST00000550146 ZEB1P37275 1124 aaPredicted RBP8.65□□□□□ -1.02
TMEM106C-213ENST00000550146 SLC27A3Q5K4L6 730 aa8.65□□□□□ -1.02
TMEM106C-213ENST00000550146 CFAP53Q96M91 514 aa8.65□□□□□ -1.02
TMEM106C-213ENST00000550146 TOGARAM1Q9Y4F4 1720 aa8.64□□□□□ -1.03
TMEM106C-213ENST00000550146 HSP90AB1P08238 724 aaKnown RBP8.64□□□□□ -1.03
TMEM106C-213ENST00000550146 HMGB2P26583 209 aaKnown RBP8.64□□□□□ -1.03
TMEM106C-213ENST00000550146 NKX1-1Q15270 411 aaPredicted RBP8.64□□□□□ -1.03
TMEM106C-213ENST00000550146 SLC15A2Q16348 729 aa8.64□□□□□ -1.03
TMEM106C-213ENST00000550146 C1orf141Q5JVX7 400 aa8.64□□□□□ -1.03
TMEM106C-213ENST00000550146 AEBP1Q8IUX7 1158 aa8.64□□□□□ -1.03
TMEM106C-213ENST00000550146 PAPPAQ13219 1627 aa8.63□□□□□ -1.03
TMEM106C-213ENST00000550146 U2SURPO15042 1029 aaKnown RBP8.63□□□□□ -1.03
TMEM106C-213ENST00000550146 ZNF530Q6P9A1 599 aaPredicted RBP8.63□□□□□ -1.03
TMEM106C-213ENST00000550146 SMARCC1Q92922 1105 aaPredicted RBP8.63□□□□□ -1.03
TMEM106C-213ENST00000550146 ANO8Q9HCE9 1232 aaPredicted RBP8.63□□□□□ -1.03
TMEM106C-213ENST00000550146 TMOD3Q9NYL9 352 aa8.63□□□□□ -1.03
TMEM106C-213ENST00000550146 CCNL1Q9UK58 526 aaPredicted RBP8.63□□□□□ -1.03
TMEM106C-213ENST00000550146 VIRMAQ69YN4 1812 aaKnown RBP8.63□□□□□ -1.03
TMEM106C-213ENST00000550146 CASZ1Q86V15 1759 aa8.63□□□□□ -1.03
TMEM106C-213ENST00000550146 TAF1LQ8IZX4 1826 aa8.62□□□□□ -1.03
TMEM106C-213ENST00000550146 HMOX1P09601 288 aa8.62□□□□□ -1.03
TMEM106C-213ENST00000550146 DCAF5Q96JK2 942 aa8.62□□□□□ -1.03
TMEM106C-213ENST00000550146 SPON1Q9HCB6 807 aa8.62□□□□□ -1.03
TMEM106C-213ENST00000550146 LRRC4BQ9NT99 713 aa8.62□□□□□ -1.03
TMEM106C-213ENST00000550146 QSER1Q2KHR3 1735 aa8.62□□□□□ -1.03
TMEM106C-213ENST00000550146 KDRP35968 1356 aa8.61□□□□□ -1.03
TMEM106C-213ENST00000550146 PALLDQ8WX93 1383 aa8.61□□□□□ -1.03
TMEM106C-213ENST00000550146 ERVV-2B6SEH9 535 aa8.61□□□□□ -1.03
TMEM106C-213ENST00000550146 PPP2R1AP30153 589 aa8.61□□□□□ -1.03
TMEM106C-213ENST00000550146 KCNQ4P56696 695 aa8.61□□□□□ -1.03
TMEM106C-213ENST00000550146 PIGBQ92521 554 aa8.61□□□□□ -1.03
TMEM106C-213ENST00000550146 TFCP2L1Q9NZI6 479 aa8.61□□□□□ -1.03
TMEM106C-213ENST00000550146 PPP1R1BQ9UD71 204 aaPredicted RBP8.61□□□□□ -1.03
TMEM106C-213ENST00000550146 NUDCQ9Y266 331 aa8.61□□□□□ -1.03
TMEM106C-213ENST00000550146 TUBGCP6Q96RT7 1819 aa8.61□□□□□ -1.03
TMEM106C-213ENST00000550146 HOXD11P31277 338 aaPredicted RBP8.6□□□□□ -1.03
TMEM106C-213ENST00000550146 CABP4P57796 275 aa8.6□□□□□ -1.03
TMEM106C-213ENST00000550146 DDX10Q13206 875 aaKnown RBP8.6□□□□□ -1.03
TMEM106C-213ENST00000550146 AKT1S1Q96B36 256 aa8.6□□□□□ -1.03
TMEM106C-213ENST00000550146 ZBTB7AO95365 584 aa8.59□□□□□ -1.03
TMEM106C-213ENST00000550146 C1QBPQ07021 282 aaKnown RBP8.59□□□□□ -1.03
TMEM106C-213ENST00000550146 ZNF827Q17R98 1081 aa8.59□□□□□ -1.03
TMEM106C-213ENST00000550146 AKAP4Q5JQC9 854 aa8.59□□□□□ -1.03
TMEM106C-213ENST00000550146 PDGFDQ9GZP0 370 aaPredicted RBP8.59□□□□□ -1.03
TMEM106C-213ENST00000550146 SCN11AQ9UI33 1791 aa8.58□□□□□ -1.04
TMEM106C-213ENST00000550146 COL3A1P02461 1466 aaPredicted RBP8.58□□□□□ -1.04
TMEM106C-213ENST00000550146 COL24A1Q17RW2 1714 aa8.58□□□□□ -1.04
TMEM106C-213ENST00000550146 U2AF1L5P0DN76 240 aaPredicted RBP8.58□□□□□ -1.04
TMEM106C-213ENST00000550146 U2AF1Q01081 240 aaKnown RBP eCLIP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms