RNA–Protein interactions for RNA: ENST00000550018.5

PPFIA2-218, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 4

Gene PPFIA2, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-218ENST00000550018 CDCA7Q9BWT1 371 aaPredicted RBP13.98□□□□□ -0.17
PPFIA2-218ENST00000550018 KCNH5Q8NCM2 988 aa13.97□□□□□ -0.17
PPFIA2-218ENST00000550018 IL2RBP14784 551 aa13.96□□□□□ -0.17
PPFIA2-218ENST00000550018 YBX3P16989 372 aaKnown RBP eCLIP13.96□□□□□ -0.17
PPFIA2-218ENST00000550018 C1QTNF8P60827 252 aa13.96□□□□□ -0.17
PPFIA2-218ENST00000550018 ITGB4P16144 1822 aa13.95□□□□□ -0.18
PPFIA2-218ENST00000550018 SLC12A5Q9H2X9 1139 aa13.95□□□□□ -0.18
PPFIA2-218ENST00000550018 EDC4Q6P2E9 1401 aaKnown RBP13.94□□□□□ -0.18
PPFIA2-218ENST00000550018 LTV1Q96GA3 475 aaPredicted RBP13.94□□□□□ -0.18
PPFIA2-218ENST00000550018 NEUROD1Q13562 356 aa13.93□□□□□ -0.18
PPFIA2-218ENST00000550018 AMIGO3Q86WK7 504 aa13.93□□□□□ -0.18
PPFIA2-218ENST00000550018 PELP1Q8IZL8 1130 aaKnown RBP13.93□□□□□ -0.18
PPFIA2-218ENST00000550018 UBR3Q6ZT12 1888 aa13.93□□□□□ -0.18
PPFIA2-218ENST00000550018 KIF20BQ96Q89 1820 aa13.92□□□□□ -0.18
PPFIA2-218ENST00000550018 MSL1Q68DK7 614 aa13.92□□□□□ -0.18
PPFIA2-218ENST00000550018 SMIM5Q71RC9 77 aa13.92□□□□□ -0.18
PPFIA2-218ENST00000550018 DDX54Q8TDD1 881 aaKnown RBP13.92□□□□□ -0.18
PPFIA2-218ENST00000550018 ZNF692Q9BU19 519 aaPredicted RBP13.92□□□□□ -0.18
PPFIA2-218ENST00000550018 KIAA1551Q9HCM1 1747 aa13.92□□□□□ -0.18
PPFIA2-218ENST00000550018 MAP2P11137 1827 aaKnown RBP13.9□□□□□ -0.18
PPFIA2-218ENST00000550018 GPR162Q16538 588 aa13.9□□□□□ -0.18
PPFIA2-218ENST00000550018 USHBP1Q8N6Y0 703 aa13.9□□□□□ -0.18
PPFIA2-218ENST00000550018 ANKRD36BQ8N2N9 1353 aa13.9□□□□□ -0.18
PPFIA2-218ENST00000550018 C4BP0C0L5 1744 aa13.9□□□□□ -0.18
PPFIA2-218ENST00000550018 PKD1L3Q7Z443 1732 aa13.9□□□□□ -0.18
PPFIA2-218ENST00000550018 MAP3K19Q56UN5 1328 aa13.9□□□□□ -0.19
PPFIA2-218ENST00000550018 PRIM1P49642 420 aaKnown RBP13.89□□□□□ -0.19
PPFIA2-218ENST00000550018 TMC1Q8TDI8 760 aa13.89□□□□□ -0.19
PPFIA2-218ENST00000550018 ATP10DQ9P241 1426 aa13.89□□□□□ -0.19
PPFIA2-218ENST00000550018 SYTL4Q96C24 671 aaPredicted RBP13.88□□□□□ -0.19
PPFIA2-218ENST00000550018 WWC3Q9ULE0 1092 aa13.88□□□□□ -0.19
PPFIA2-218ENST00000550018 COL23A1Q86Y22 540 aaPredicted RBP13.87□□□□□ -0.19
PPFIA2-218ENST00000550018 HOXC9P31274 260 aa13.86□□□□□ -0.19
PPFIA2-218ENST00000550018 IP6K1Q92551 441 aa13.86□□□□□ -0.19
PPFIA2-218ENST00000550018 ADCY9O60503 1353 aa13.85□□□□□ -0.19
PPFIA2-218ENST00000550018 ANKRD26Q9UPS8 1709 aa13.85□□□□□ -0.19
PPFIA2-218ENST00000550018 GIGYF1O75420 1035 aaPredicted RBP13.85□□□□□ -0.19
PPFIA2-218ENST00000550018 RRS1Q15050 365 aaKnown RBP13.85□□□□□ -0.19
PPFIA2-218ENST00000550018 TFCP2L1Q9NZI6 479 aa13.85□□□□□ -0.19
PPFIA2-218ENST00000550018 N4BP2Q86UW6 1770 aaPredicted RBP13.84□□□□□ -0.19
PPFIA2-218ENST00000550018 TESK2Q96S53 571 aa13.84□□□□□ -0.19
PPFIA2-218ENST00000550018 SLC27A3Q5K4L6 730 aa13.83□□□□□ -0.2
PPFIA2-218ENST00000550018 NBPF6Q5VWK0 638 aa13.83□□□□□ -0.2
PPFIA2-218ENST00000550018 NBPF4Q96M43 638 aa13.83□□□□□ -0.2
PPFIA2-218ENST00000550018 CARD11Q9BXL7 1154 aa13.83□□□□□ -0.2
PPFIA2-218ENST00000550018 CCNL1Q9UK58 526 aaPredicted RBP13.83□□□□□ -0.2
PPFIA2-218ENST00000550018 POLD1P28340 1107 aa13.81□□□□□ -0.2
PPFIA2-218ENST00000550018 HDGFL2Q7Z4V5 671 aaPredicted RBP13.81□□□□□ -0.2
PPFIA2-218ENST00000550018 CICQ96RK0 1608 aaPredicted RBP13.81□□□□□ -0.2
PPFIA2-218ENST00000550018 ZNF526Q8TF50 670 aaPredicted RBP13.8□□□□□ -0.2
PPFIA2-218ENST00000550018 SLC16A10Q8TF71 515 aa13.8□□□□□ -0.2
PPFIA2-218ENST00000550018 KIF13BQ9NQT8 1826 aa13.8□□□□□ -0.2
PPFIA2-218ENST00000550018 C4AP0C0L4 1744 aa13.79□□□□□ -0.2
PPFIA2-218ENST00000550018 BRCA1P38398 1863 aaKnown RBP13.79□□□□□ -0.2
PPFIA2-218ENST00000550018 ZCRB1Q8TBF4 217 aaKnown RBP13.79□□□□□ -0.2
PPFIA2-218ENST00000550018 GGNBP2Q9H3C7 697 aa13.79□□□□□ -0.2
PPFIA2-218ENST00000550018 PALLDQ8WX93 1383 aa13.79□□□□□ -0.2
PPFIA2-218ENST00000550018 RTL1A6NKG5 1358 aa13.78□□□□□ -0.2
PPFIA2-218ENST00000550018 COL5A3P25940 1745 aaPredicted RBP13.78□□□□□ -0.2
PPFIA2-218ENST00000550018 CYP27B1O15528 508 aa13.77□□□□□ -0.21
PPFIA2-218ENST00000550018 IFFO2Q5TF58 517 aa13.77□□□□□ -0.21
PPFIA2-218ENST00000550018 USP47Q96K76 1375 aa13.77□□□□□ -0.21
PPFIA2-218ENST00000550018 RNF39Q9H2S5 420 aa13.77□□□□□ -0.21
PPFIA2-218ENST00000550018 NCAPD2Q15021 1401 aa13.76□□□□□ -0.21
PPFIA2-218ENST00000550018 ST20-MTHFSA0A0A6YYL1 179 aa13.76□□□□□ -0.21
PPFIA2-218ENST00000550018 AMPHP49418 695 aa13.76□□□□□ -0.21
PPFIA2-218ENST00000550018 HSP90AB2PQ58FF8 381 aa13.76□□□□□ -0.21
PPFIA2-218ENST00000550018 TERF2IPQ9NYB0 399 aa13.76□□□□□ -0.21
PPFIA2-218ENST00000550018 PHF14O94880 888 aa13.75□□□□□ -0.21
PPFIA2-218ENST00000550018 COG3Q96JB2 828 aa13.75□□□□□ -0.21
PPFIA2-218ENST00000550018 IGSF1Q8N6C5 1336 aa13.74□□□□□ -0.21
PPFIA2-218ENST00000550018 FYB1O15117 783 aa13.74□□□□□ -0.21
PPFIA2-218ENST00000550018 LINC00116Q8NCU8 138 aa13.74□□□□□ -0.21
PPFIA2-218ENST00000550018 PXDNLA1KZ92 1463 aa13.74□□□□□ -0.21
PPFIA2-218ENST00000550018 MYH14Q7Z406 1995 aaKnown RBP13.73□□□□□ -0.21
PPFIA2-218ENST00000550018 MPRIPQ6WCQ1 1025 aa13.73□□□□□ -0.21
PPFIA2-218ENST00000550018 EMILIN1Q9Y6C2 1016 aa13.73□□□□□ -0.21
PPFIA2-218ENST00000550018 ITPK1Q13572 414 aa13.72□□□□□ -0.21
PPFIA2-218ENST00000550018 INSRP06213 1382 aa13.71□□□□□ -0.21
PPFIA2-218ENST00000550018 WDR90Q96KV7 1748 aa13.71□□□□□ -0.21
PPFIA2-218ENST00000550018 TJP1Q07157 1748 aa13.7□□□□□ -0.22
PPFIA2-218ENST00000550018 PCDH11XQ9BZA7 1347 aa13.7□□□□□ -0.22
PPFIA2-218ENST00000550018 PCDH11YQ9BZA8 1340 aa13.7□□□□□ -0.22
PPFIA2-218ENST00000550018 ADAMTS7Q9UKP4 1686 aa13.7□□□□□ -0.22
PPFIA2-218ENST00000550018 KIF3CO14782 793 aa13.7□□□□□ -0.22
PPFIA2-218ENST00000550018 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
PPFIA2-218ENST00000550018 PIGBQ92521 554 aa13.7□□□□□ -0.22
PPFIA2-218ENST00000550018 FLT4P35916 1363 aa13.7□□□□□ -0.22
PPFIA2-218ENST00000550018 TONSLQ96HA7 1378 aa13.7□□□□□ -0.22
PPFIA2-218ENST00000550018 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.69□□□□□ -0.22
PPFIA2-218ENST00000550018 CARD14Q9BXL6 1004 aa13.69□□□□□ -0.22
PPFIA2-218ENST00000550018 NSD3Q9BZ95 1437 aa13.69□□□□□ -0.22
PPFIA2-218ENST00000550018 KDRP35968 1356 aa13.69□□□□□ -0.22
PPFIA2-218ENST00000550018 SMG6Q86US8 1419 aaKnown RBP13.68□□□□□ -0.22
PPFIA2-218ENST00000550018 GRIN3BO60391 1043 aa13.68□□□□□ -0.22
PPFIA2-218ENST00000550018 TATP17735 454 aaPredicted RBP13.68□□□□□ -0.22
PPFIA2-218ENST00000550018 SLC4A9Q96Q91 983 aa13.68□□□□□ -0.22
PPFIA2-218ENST00000550018 GPBP1L1Q9HC44 474 aaPredicted RBP13.68□□□□□ -0.22
PPFIA2-218ENST00000550018 CD2APQ9Y5K6 639 aa13.68□□□□□ -0.22
PPFIA2-218ENST00000550018 ARFGEF1Q9Y6D6 1849 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms