RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 LY75O60449 1722 aa21.65■■□□□ 1.06
RAB5C-205ENST00000550013 NSD2O96028 1365 aa21.64■■□□□ 1.06
RAB5C-205ENST00000550013 ZCRB1Q8TBF4 217 aaKnown RBP21.64■■□□□ 1.05
RAB5C-205ENST00000550013 RTL1A6NKG5 1358 aa21.63■■□□□ 1.05
RAB5C-205ENST00000550013 CHD4Q14839 1912 aa21.63■■□□□ 1.05
RAB5C-205ENST00000550013 SLC24A1O60721 1099 aa21.63■■□□□ 1.05
RAB5C-205ENST00000550013 GGNBP2Q9H3C7 697 aa21.63■■□□□ 1.05
RAB5C-205ENST00000550013 PNPLA7Q6ZV29 1317 aa21.62■■□□□ 1.05
RAB5C-205ENST00000550013 FYB1O15117 783 aa21.62■■□□□ 1.05
RAB5C-205ENST00000550013 NBPF6Q5VWK0 638 aa21.62■■□□□ 1.05
RAB5C-205ENST00000550013 USHBP1Q8N6Y0 703 aa21.62■■□□□ 1.05
RAB5C-205ENST00000550013 NBPF4Q96M43 638 aa21.62■■□□□ 1.05
RAB5C-205ENST00000550013 USP47Q96K76 1375 aa21.61■■□□□ 1.05
RAB5C-205ENST00000550013 MAP3K5Q99683 1374 aa21.61■■□□□ 1.05
RAB5C-205ENST00000550013 COL24A1Q17RW2 1714 aa21.61■■□□□ 1.05
RAB5C-205ENST00000550013 KIF20BQ96Q89 1820 aa21.61■■□□□ 1.05
RAB5C-205ENST00000550013 TMF1P82094 1093 aa21.6■■□□□ 1.05
RAB5C-205ENST00000550013 ZNF784Q8NCA9 323 aaPredicted RBP21.59■■□□□ 1.05
RAB5C-205ENST00000550013 SLC16A10Q8TF71 515 aa21.59■■□□□ 1.05
RAB5C-205ENST00000550013 TFCP2L1Q9NZI6 479 aa21.59■■□□□ 1.05
RAB5C-205ENST00000550013 KLHL34Q8N239 644 aa21.57■■□□□ 1.04
RAB5C-205ENST00000550013 SMG6Q86US8 1419 aaKnown RBP21.56■■□□□ 1.04
RAB5C-205ENST00000550013 HSP90AB2PQ58FF8 381 aa21.56■■□□□ 1.04
RAB5C-205ENST00000550013 CCNL1Q9UK58 526 aaPredicted RBP21.56■■□□□ 1.04
RAB5C-205ENST00000550013 POLD1P28340 1107 aa21.55■■□□□ 1.04
RAB5C-205ENST00000550013 RAPGEF4Q8WZA2 1011 aa21.55■■□□□ 1.04
RAB5C-205ENST00000550013 CGNL1Q0VF96 1302 aa21.54■■□□□ 1.04
RAB5C-205ENST00000550013 INSRP06213 1382 aa21.53■■□□□ 1.04
RAB5C-205ENST00000550013 TATP17735 454 aaPredicted RBP21.53■■□□□ 1.04
RAB5C-205ENST00000550013 GPR162Q16538 588 aa21.53■■□□□ 1.04
RAB5C-205ENST00000550013 FLT4P35916 1363 aa21.52■■□□□ 1.04
RAB5C-205ENST00000550013 C5P01031 1676 aa21.51■■□□□ 1.03
RAB5C-205ENST00000550013 CARD14Q9BXL6 1004 aa21.51■■□□□ 1.03
RAB5C-205ENST00000550013 GOLGB1Q14789 3259 aaKnown RBP21.51■■□□□ 1.03
RAB5C-205ENST00000550013 MSH5O43196 834 aa21.5■■□□□ 1.03
RAB5C-205ENST00000550013 COL23A1Q86Y22 540 aaPredicted RBP21.5■■□□□ 1.03
RAB5C-205ENST00000550013 NLGN2Q8NFZ4 835 aa21.5■■□□□ 1.03
RAB5C-205ENST00000550013 TOGARAM1Q9Y4F4 1720 aa21.49■■□□□ 1.03
RAB5C-205ENST00000550013 CDCA8Q53HL2 280 aa21.49■■□□□ 1.03
RAB5C-205ENST00000550013 PELP1Q8IZL8 1130 aaKnown RBP21.49■■□□□ 1.03
RAB5C-205ENST00000550013 EMILIN1Q9Y6C2 1016 aa21.49■■□□□ 1.03
RAB5C-205ENST00000550013 TAF1LQ8IZX4 1826 aa21.49■■□□□ 1.03
RAB5C-205ENST00000550013 PCDH11XQ9BZA7 1347 aa21.49■■□□□ 1.03
RAB5C-205ENST00000550013 PCDH11YQ9BZA8 1340 aa21.49■■□□□ 1.03
RAB5C-205ENST00000550013 ITGB4P16144 1822 aa21.48■■□□□ 1.03
RAB5C-205ENST00000550013 NSD3Q9BZ95 1437 aa21.48■■□□□ 1.03
RAB5C-205ENST00000550013 KIF24Q5T7B8 1368 aa21.48■■□□□ 1.03
RAB5C-205ENST00000550013 PKD1L3Q7Z443 1732 aa21.47■■□□□ 1.03
RAB5C-205ENST00000550013 CYP27B1O15528 508 aa21.47■■□□□ 1.03
RAB5C-205ENST00000550013 TRIM26Q12899 539 aaPredicted RBP21.47■■□□□ 1.03
RAB5C-205ENST00000550013 MSL1Q68DK7 614 aa21.46■■□□□ 1.03
RAB5C-205ENST00000550013 PALLDQ8WX93 1383 aa21.46■■□□□ 1.03
RAB5C-205ENST00000550013 MPRIPQ6WCQ1 1025 aa21.45■■□□□ 1.02
RAB5C-205ENST00000550013 ANKRD26Q9UPS8 1709 aa21.45■■□□□ 1.02
RAB5C-205ENST00000550013 MAP2P11137 1827 aaKnown RBP21.43■■□□□ 1.02
RAB5C-205ENST00000550013 PPM1GO15355 546 aaPredicted RBP21.43■■□□□ 1.02
RAB5C-205ENST00000550013 NCAPD2Q15021 1401 aa21.42■■□□□ 1.02
RAB5C-205ENST00000550013 C4BP0C0L5 1744 aa21.41■■□□□ 1.02
RAB5C-205ENST00000550013 YBX3P16989 372 aaKnown RBP eCLIP21.4■■□□□ 1.027e-8■■■□□ 18.4
RAB5C-205ENST00000550013 AMIGO3Q86WK7 504 aa21.39■■□□□ 1.01
RAB5C-205ENST00000550013 UBR3Q6ZT12 1888 aa21.39■■□□□ 1.01
RAB5C-205ENST00000550013 C1QTNF8P60827 252 aa21.38■■□□□ 1.01
RAB5C-205ENST00000550013 PIGBQ92521 554 aa21.38■■□□□ 1.01
RAB5C-205ENST00000550013 WASHC2AQ641Q2 1341 aa21.37■■□□□ 1.01
RAB5C-205ENST00000550013 SMIM5Q71RC9 77 aa21.37■■□□□ 1.01
RAB5C-205ENST00000550013 SMARCC1Q92922 1105 aaPredicted RBP21.37■■□□□ 1.01
RAB5C-205ENST00000550013 EYA1Q99502 592 aa21.37■■□□□ 1.01
RAB5C-205ENST00000550013 NKX1-1Q15270 411 aaPredicted RBP21.36■■□□□ 1.01
RAB5C-205ENST00000550013 FLAD1Q8NFF5 587 aa21.36■■□□□ 1.01
RAB5C-205ENST00000550013 SPG7Q9UQ90 795 aa21.36■■□□□ 1.01
RAB5C-205ENST00000550013 SENP3-EIF4A1A0A087X0R7 540 aa21.35■■□□□ 1.01
RAB5C-205ENST00000550013 AK7Q96M32 723 aa21.35■■□□□ 1.01
RAB5C-205ENST00000550013 PHF14O94880 888 aa21.34■■□□□ 1.01
RAB5C-205ENST00000550013 POLR3GLQ9BT43 218 aa21.34■■□□□ 1.01
RAB5C-205ENST00000550013 POLKQ9UBT6 870 aa21.34■■□□□ 1.01
RAB5C-205ENST00000550013 GRIN3BO60391 1043 aa21.33■■□□□ 1.01
RAB5C-205ENST00000550013 HMGB2P26583 209 aaKnown RBP21.33■■□□□ 1.01
RAB5C-205ENST00000550013 CD2APQ9Y5K6 639 aa21.33■■□□□ 1.01
RAB5C-205ENST00000550013 TNNT2P45379 298 aaPredicted RBP21.32■■□□□ 1
RAB5C-205ENST00000550013 LINC00116Q8NCU8 138 aa21.32■■□□□ 1
RAB5C-205ENST00000550013 TIMELESSQ9UNS1 1208 aa21.32■■□□□ 1
RAB5C-205ENST00000550013 LOC102724428A0A0B4J2F2 783 aa21.31■■□□□ 1
RAB5C-205ENST00000550013 GIGYF1O75420 1035 aaPredicted RBP21.31■■□□□ 1
RAB5C-205ENST00000550013 SIK1P57059 783 aa21.31■■□□□ 1
RAB5C-205ENST00000550013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.31■■□□□ 1
RAB5C-205ENST00000550013 TMOD3Q9NYL9 352 aa21.31■■□□□ 1
RAB5C-205ENST00000550013 ASAP1Q9ULH1 1129 aa21.31■■□□□ 1
RAB5C-205ENST00000550013 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.3■■□□□ 1
RAB5C-205ENST00000550013 PHKG2P15735 406 aa21.3■■□□□ 1
RAB5C-205ENST00000550013 EIF4A2Q14240 407 aaKnown RBP21.3■■□□□ 1
RAB5C-205ENST00000550013 ITPK1Q13572 414 aa21.29■■□□□ 1
RAB5C-205ENST00000550013 IFNL2Q8IZJ0 200 aa21.28■■□□□ 1
RAB5C-205ENST00000550013 SSFA2P28290 1259 aa21.27■■□□□ 1
RAB5C-205ENST00000550013 PCGF6Q9BYE7 350 aa21.26■□□□□ 0.99
RAB5C-205ENST00000550013 ATG3Q9NT62 314 aa21.26■□□□□ 0.99
RAB5C-205ENST00000550013 GNPATO15228 680 aa21.25■□□□□ 0.99
RAB5C-205ENST00000550013 ATP6V1AP38606 617 aa21.25■□□□□ 0.99
RAB5C-205ENST00000550013 ATP10DQ9P241 1426 aa21.25■□□□□ 0.99
RAB5C-205ENST00000550013 WWC3Q9ULE0 1092 aa21.25■□□□□ 0.99
RAB5C-205ENST00000550013 IGSF1Q8N6C5 1336 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms