RNA–Protein interactions for RNA: ENST00000549917.1

PPFIA2-217, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 4

Gene PPFIA2, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-217ENST00000549917 MAFBQ9Y5Q3 323 aaPredicted RBP10.42□□□□□ -0.74
PPFIA2-217ENST00000549917 USP17L3A6NCW0 530 aa10.41□□□□□ -0.74
PPFIA2-217ENST00000549917 USP17L4A6NCW7 530 aa10.41□□□□□ -0.74
PPFIA2-217ENST00000549917 USP17L2Q6R6M4 530 aa10.41□□□□□ -0.74
PPFIA2-217ENST00000549917 USP17L1Q7RTZ2 530 aa10.41□□□□□ -0.74
PPFIA2-217ENST00000549917 PLEKHM2Q8IWE5 1019 aa10.41□□□□□ -0.74
PPFIA2-217ENST00000549917 SUPT5HO00267 1087 aaKnown RBP10.4□□□□□ -0.74
PPFIA2-217ENST00000549917 LINC00528Q8N1L1 170 aa10.4□□□□□ -0.74
PPFIA2-217ENST00000549917 POTECB2RU33 542 aa10.39□□□□□ -0.75
PPFIA2-217ENST00000549917 STAU1O95793 577 aaKnown RBP10.38□□□□□ -0.75
PPFIA2-217ENST00000549917 RELBQ01201 579 aa10.38□□□□□ -0.75
PPFIA2-217ENST00000549917 CCDC82Q8N4S0 544 aa10.38□□□□□ -0.75
PPFIA2-217ENST00000549917 ZFP42Q96MM3 310 aa10.38□□□□□ -0.75
PPFIA2-217ENST00000549917 PURBQ96QR8 312 aaKnown RBP10.38□□□□□ -0.75
PPFIA2-217ENST00000549917 GMPR2Q9P2T1 348 aaKnown RBP10.38□□□□□ -0.75
PPFIA2-217ENST00000549917 USP4Q13107 963 aa10.37□□□□□ -0.75
PPFIA2-217ENST00000549917 EML3Q32P44 896 aa10.37□□□□□ -0.75
PPFIA2-217ENST00000549917 C6orf118Q5T5N4 469 aa10.37□□□□□ -0.75
PPFIA2-217ENST00000549917 TSEN34Q9BSV6 310 aaKnown RBP10.37□□□□□ -0.75
PPFIA2-217ENST00000549917 PCDHGA11Q9Y5H2 935 aa10.37□□□□□ -0.75
PPFIA2-217ENST00000549917 ATP5J2-PTCD1G3V325 749 aa10.36□□□□□ -0.75
PPFIA2-217ENST00000549917 SPINT1O43278 529 aa10.36□□□□□ -0.75
PPFIA2-217ENST00000549917 LZTS3O60299 673 aaPredicted RBP10.36□□□□□ -0.75
PPFIA2-217ENST00000549917 PTGIRP43119 386 aa10.36□□□□□ -0.75
PPFIA2-217ENST00000549917 ZNF395Q9H8N7 513 aaPredicted RBP10.36□□□□□ -0.75
PPFIA2-217ENST00000549917 MYCP01106 439 aaPredicted RBP10.35□□□□□ -0.75
PPFIA2-217ENST00000549917 LMOD1P29536 600 aaPredicted RBP10.35□□□□□ -0.75
PPFIA2-217ENST00000549917 KANK4Q5T7N3 995 aaPredicted RBP10.35□□□□□ -0.75
PPFIA2-217ENST00000549917 SRPK2P78362 688 aaKnown RBP10.34□□□□□ -0.75
PPFIA2-217ENST00000549917 CYP2U1Q7Z449 544 aa10.34□□□□□ -0.75
PPFIA2-217ENST00000549917 RAB6BQ9NRW1 208 aa10.34□□□□□ -0.75
PPFIA2-217ENST00000549917 KIAA1024Q9UPX6 916 aa10.34□□□□□ -0.75
PPFIA2-217ENST00000549917 BMP2P12643 396 aa10.33□□□□□ -0.76
PPFIA2-217ENST00000549917 SCNN1DP51172 638 aa10.33□□□□□ -0.76
PPFIA2-217ENST00000549917 GTF2IP78347 998 aa10.33□□□□□ -0.76
PPFIA2-217ENST00000549917 CLDN10P78369 228 aa10.33□□□□□ -0.76
PPFIA2-217ENST00000549917 SIRT1Q96EB6 747 aa10.33□□□□□ -0.76
PPFIA2-217ENST00000549917 INSM2Q96T92 566 aaPredicted RBP10.33□□□□□ -0.76
PPFIA2-217ENST00000549917 ARHGEF10LQ9HCE6 1279 aa10.33□□□□□ -0.76
PPFIA2-217ENST00000549917 MKRN1Q9UHC7 482 aaKnown RBP10.33□□□□□ -0.76
PPFIA2-217ENST00000549917 NOD1Q9Y239 953 aa10.33□□□□□ -0.76
PPFIA2-217ENST00000549917 A0A1W2PRU2 124 aa10.32□□□□□ -0.76
PPFIA2-217ENST00000549917 ZBTB7BO15156 539 aaPredicted RBP10.32□□□□□ -0.76
PPFIA2-217ENST00000549917 IL2RAP01589 272 aa10.32□□□□□ -0.76
PPFIA2-217ENST00000549917 CTSOP43234 321 aaPredicted RBP10.32□□□□□ -0.76
PPFIA2-217ENST00000549917 SCARF1Q14162 830 aa10.32□□□□□ -0.76
PPFIA2-217ENST00000549917 TRIM47Q96LD4 638 aa10.32□□□□□ -0.76
PPFIA2-217ENST00000549917 ETNK1Q9HBU6 452 aa10.32□□□□□ -0.76
PPFIA2-217ENST00000549917 SERPINA10Q9UK55 444 aa10.32□□□□□ -0.76
PPFIA2-217ENST00000549917 HRH3Q9Y5N1 445 aa10.32□□□□□ -0.76
PPFIA2-217ENST00000549917 SOS2Q07890 1332 aaPredicted RBP10.32□□□□□ -0.76
PPFIA2-217ENST00000549917 TMEM229AB2RXF0 380 aa10.31□□□□□ -0.76
PPFIA2-217ENST00000549917 DKK1O94907 266 aa10.31□□□□□ -0.76
PPFIA2-217ENST00000549917 GNRH1P01148 92 aa10.31□□□□□ -0.76
PPFIA2-217ENST00000549917 SNRPBP14678 240 aaKnown RBP10.31□□□□□ -0.76
PPFIA2-217ENST00000549917 FOXD4L5Q5VV16 416 aaPredicted RBP10.31□□□□□ -0.76
PPFIA2-217ENST00000549917 TRIM52Q96A61 297 aa10.31□□□□□ -0.76
PPFIA2-217ENST00000549917 CCDC97Q96F63 343 aaPredicted RBP10.31□□□□□ -0.76
PPFIA2-217ENST00000549917 UPP2O95045 317 aa10.3□□□□□ -0.76
PPFIA2-217ENST00000549917 RFX1P22670 979 aa10.3□□□□□ -0.76
PPFIA2-217ENST00000549917 CLN3Q13286 438 aa10.3□□□□□ -0.76
PPFIA2-217ENST00000549917 CRTC2Q53ET0 693 aaPredicted RBP10.29□□□□□ -0.76
PPFIA2-217ENST00000549917 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.28□□□□□ -0.76
PPFIA2-217ENST00000549917 SOBPA7XYQ1 873 aa10.28□□□□□ -0.76
PPFIA2-217ENST00000549917 OGFOD1Q8N543 542 aa10.28□□□□□ -0.76
PPFIA2-217ENST00000549917 ESF1Q9H501 851 aaKnown RBP10.28□□□□□ -0.76
PPFIA2-217ENST00000549917 DNMT3LQ9UJW3 386 aa10.28□□□□□ -0.76
PPFIA2-217ENST00000549917 MEN1O00255 615 aa10.27□□□□□ -0.77
PPFIA2-217ENST00000549917 GDF10P55107 478 aa10.27□□□□□ -0.77
PPFIA2-217ENST00000549917 CDCA8Q53HL2 280 aa10.27□□□□□ -0.77
PPFIA2-217ENST00000549917 RNF217Q8TC41 542 aa10.27□□□□□ -0.77
PPFIA2-217ENST00000549917 XAGE2Q96GT9 111 aa10.27□□□□□ -0.77
PPFIA2-217ENST00000549917 SENP2Q9HC62 589 aa10.27□□□□□ -0.77
PPFIA2-217ENST00000549917 TTLL8A6PVC2 850 aa10.26□□□□□ -0.77
PPFIA2-217ENST00000549917 WASLO00401 505 aaPredicted RBP10.26□□□□□ -0.77
PPFIA2-217ENST00000549917 INHAP05111 366 aa10.26□□□□□ -0.77
PPFIA2-217ENST00000549917 PTK7Q13308 1070 aa10.26□□□□□ -0.77
PPFIA2-217ENST00000549917 TRIM50Q86XT4 487 aa10.26□□□□□ -0.77
PPFIA2-217ENST00000549917 CNKSR1Q969H4 720 aa10.26□□□□□ -0.77
PPFIA2-217ENST00000549917 ESYT1Q9BSJ8 1104 aa10.26□□□□□ -0.77
PPFIA2-217ENST00000549917 DNAAF2Q9NVR5 837 aaKnown RBP10.26□□□□□ -0.77
PPFIA2-217ENST00000549917 C11orf95C9JLR9 678 aaPredicted RBP10.25□□□□□ -0.77
PPFIA2-217ENST00000549917 RASA1P20936 1047 aa10.25□□□□□ -0.77
PPFIA2-217ENST00000549917 RNF144AP50876 292 aaPredicted RBP10.25□□□□□ -0.77
PPFIA2-217ENST00000549917 SIX5Q8N196 739 aa10.25□□□□□ -0.77
PPFIA2-217ENST00000549917 KIFC2Q96AC6 838 aa10.25□□□□□ -0.77
PPFIA2-217ENST00000549917 ZNF594Q96JF6 807 aaPredicted RBP10.25□□□□□ -0.77
PPFIA2-217ENST00000549917 FHDC1Q9C0D6 1143 aaPredicted RBP10.25□□□□□ -0.77
PPFIA2-217ENST00000549917 VRTNQ9H8Y1 702 aa10.25□□□□□ -0.77
PPFIA2-217ENST00000549917 POLMQ9NP87 494 aaPredicted RBP10.25□□□□□ -0.77
PPFIA2-217ENST00000549917 CCDC102BQ68D86 513 aa10.24□□□□□ -0.77
PPFIA2-217ENST00000549917 LARGE2Q8N3Y3 721 aa10.24□□□□□ -0.77
PPFIA2-217ENST00000549917 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.24□□□□□ -0.77
PPFIA2-217ENST00000549917 TPCN2Q8NHX9 752 aa10.24□□□□□ -0.77
PPFIA2-217ENST00000549917 FIGNL2A6NMB9 653 aa10.23□□□□□ -0.77
PPFIA2-217ENST00000549917 FAM196BA6NMK8 535 aa10.23□□□□□ -0.77
PPFIA2-217ENST00000549917 USP17L15C9J2P7 530 aa10.23□□□□□ -0.77
PPFIA2-217ENST00000549917 USP17L10C9JJH3 530 aa10.23□□□□□ -0.77
PPFIA2-217ENST00000549917 USP17L13C9JLJ4 530 aa10.23□□□□□ -0.77
PPFIA2-217ENST00000549917 USP17L12C9JPN9 530 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms