RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 PCDHB9Q9Y5E1 797 aa10.47□□□□□ -0.73
CCDC38-208ENST00000549876 ATP5J2-PTCD1G3V325 749 aa10.46□□□□□ -0.73
CCDC38-208ENST00000549876 GDF11O95390 407 aa10.46□□□□□ -0.73
CCDC38-208ENST00000549876 GAS6Q14393 721 aa10.46□□□□□ -0.73
CCDC38-208ENST00000549876 PRICKLE2Q7Z3G6 844 aa10.46□□□□□ -0.73
CCDC38-208ENST00000549876 ADAMTS2O95450 1211 aa10.45□□□□□ -0.74
CCDC38-208ENST00000549876 GPC1P35052 558 aa10.45□□□□□ -0.74
CCDC38-208ENST00000549876 CCDC125Q86Z20 511 aa10.45□□□□□ -0.74
CCDC38-208ENST00000549876 LOC100996750A0A140TA64 210 aa10.44□□□□□ -0.74
CCDC38-208ENST00000549876 RHOQP17081 205 aa10.44□□□□□ -0.74
CCDC38-208ENST00000549876 ERVK-9P63128 1117 aa10.44□□□□□ -0.74
CCDC38-208ENST00000549876 SRSF11Q05519 484 aaKnown RBP10.44□□□□□ -0.74
CCDC38-208ENST00000549876 KRTAP4-6Q9BYQ5 205 aa10.44□□□□□ -0.74
CCDC38-208ENST00000549876 LYPD4Q6UWN0 246 aa10.43□□□□□ -0.74
CCDC38-208ENST00000549876 A0A1W2PRU2 124 aa10.42□□□□□ -0.74
CCDC38-208ENST00000549876 CC2D2BQ6DHV5 1058 aa10.42□□□□□ -0.74
CCDC38-208ENST00000549876 IL27Q8NEV9 243 aa10.42□□□□□ -0.74
CCDC38-208ENST00000549876 GMCL1Q96IK5 515 aa10.42□□□□□ -0.74
CCDC38-208ENST00000549876 MEN1O00255 615 aa10.41□□□□□ -0.74
CCDC38-208ENST00000549876 TRIM22Q8IYM9 498 aa10.41□□□□□ -0.74
CCDC38-208ENST00000549876 ZNF837Q96EG3 531 aaPredicted RBP10.41□□□□□ -0.74
CCDC38-208ENST00000549876 GPR37L1O60883 481 aa10.4□□□□□ -0.74
CCDC38-208ENST00000549876 MCCD1P59942 119 aaPredicted RBP10.4□□□□□ -0.74
CCDC38-208ENST00000549876 NR1H3Q13133 447 aa10.4□□□□□ -0.74
CCDC38-208ENST00000549876 RNF20Q5VTR2 975 aa10.4□□□□□ -0.74
CCDC38-208ENST00000549876 CELA2BP08218 269 aaPredicted RBP10.39□□□□□ -0.75
CCDC38-208ENST00000549876 SUZ12Q15022 739 aaKnown RBP10.39□□□□□ -0.75
CCDC38-208ENST00000549876 NEUROD2Q15784 382 aa10.39□□□□□ -0.75
CCDC38-208ENST00000549876 SCTRP47872 440 aa10.38□□□□□ -0.75
CCDC38-208ENST00000549876 DBN1Q16643 649 aa10.38□□□□□ -0.75
CCDC38-208ENST00000549876 GRIP2Q9C0E4 1043 aa10.38□□□□□ -0.75
CCDC38-208ENST00000549876 DYRK1BQ9Y463 629 aa10.38□□□□□ -0.75
CCDC38-208ENST00000549876 SOCS7O14512 581 aa10.37□□□□□ -0.75
CCDC38-208ENST00000549876 TRAK2O60296 914 aa10.37□□□□□ -0.75
CCDC38-208ENST00000549876 IRS1P35568 1242 aa10.37□□□□□ -0.75
CCDC38-208ENST00000549876 MARSP56192 900 aaKnown RBP10.37□□□□□ -0.75
CCDC38-208ENST00000549876 CLN3Q13286 438 aa10.37□□□□□ -0.75
CCDC38-208ENST00000549876 BANK1Q8NDB2 785 aa10.37□□□□□ -0.75
CCDC38-208ENST00000549876 MBIPQ9NS73 344 aa10.37□□□□□ -0.75
CCDC38-208ENST00000549876 POU4F2Q12837 409 aa10.36□□□□□ -0.75
CCDC38-208ENST00000549876 CYP2U1Q7Z449 544 aa10.36□□□□□ -0.75
CCDC38-208ENST00000549876 OSBPL3Q9H4L5 887 aa10.36□□□□□ -0.75
CCDC38-208ENST00000549876 DNMT3AQ9Y6K1 912 aaPredicted RBP10.36□□□□□ -0.75
CCDC38-208ENST00000549876 SPATA31C2B4DYI2 1134 aa10.35□□□□□ -0.75
CCDC38-208ENST00000549876 KANK3Q6NY19 840 aa10.35□□□□□ -0.75
CCDC38-208ENST00000549876 MTMR14Q8NCE2 650 aa10.35□□□□□ -0.75
CCDC38-208ENST00000549876 SCARF2Q96GP6 870 aaPredicted RBP10.35□□□□□ -0.75
CCDC38-208ENST00000549876 NLRP3Q96P20 1036 aa10.35□□□□□ -0.75
CCDC38-208ENST00000549876 PCDHB11Q9Y5F2 797 aa10.35□□□□□ -0.75
CCDC38-208ENST00000549876 GPR25O00155 361 aa10.34□□□□□ -0.75
CCDC38-208ENST00000549876 MAP3K10Q02779 954 aa10.34□□□□□ -0.75
CCDC38-208ENST00000549876 SLC27A3Q5K4L6 730 aa10.34□□□□□ -0.75
CCDC38-208ENST00000549876 NBPF10Q6P3W6 841 aaKnown RBP10.34□□□□□ -0.75
CCDC38-208ENST00000549876 RIPOR1Q6ZS17 1223 aa10.34□□□□□ -0.75
CCDC38-208ENST00000549876 NBPF15Q8N660 670 aa10.34□□□□□ -0.75
CCDC38-208ENST00000549876 ZNF592Q92610 1267 aa10.34□□□□□ -0.75
CCDC38-208ENST00000549876 WDR44Q5JSH3 913 aa10.33□□□□□ -0.76
CCDC38-208ENST00000549876 FOXR1Q6PIV2 292 aa10.33□□□□□ -0.76
CCDC38-208ENST00000549876 IGF1RP08069 1367 aa10.33□□□□□ -0.76
CCDC38-208ENST00000549876 H7C1W4 665 aa10.32□□□□□ -0.76
CCDC38-208ENST00000549876 BRPF1P55201 1214 aaPredicted RBP10.32□□□□□ -0.76
CCDC38-208ENST00000549876 ZNF330Q9Y3S2 320 aaPredicted RBP10.32□□□□□ -0.76
CCDC38-208ENST00000549876 NDUFB9Q9Y6M9 179 aa10.32□□□□□ -0.76
CCDC38-208ENST00000549876 GTPBP3Q969Y2 492 aaKnown RBP10.31□□□□□ -0.76
CCDC38-208ENST00000549876 GAS2L1Q99501 681 aaPredicted RBP10.31□□□□□ -0.76
CCDC38-208ENST00000549876 ARHGEF10LQ9HCE6 1279 aa10.31□□□□□ -0.76
CCDC38-208ENST00000549876 SNRKQ9NRH2 765 aa10.3□□□□□ -0.76
CCDC38-208ENST00000549876 ENAMQ9NRM1 1142 aa10.3□□□□□ -0.76
CCDC38-208ENST00000549876 WASLO00401 505 aaPredicted RBP10.28□□□□□ -0.76
CCDC38-208ENST00000549876 GNRH1P01148 92 aa10.28□□□□□ -0.76
CCDC38-208ENST00000549876 IGHA1P01876 353 aa10.28□□□□□ -0.76
CCDC38-208ENST00000549876 BCRP11274 1271 aa10.28□□□□□ -0.76
CCDC38-208ENST00000549876 GPAT2Q6NUI2 795 aa10.28□□□□□ -0.76
CCDC38-208ENST00000549876 TAS1R3Q7RTX0 852 aa10.28□□□□□ -0.76
CCDC38-208ENST00000549876 ACDQ96AP0 544 aa10.28□□□□□ -0.76
CCDC38-208ENST00000549876 TIMMDC1Q9NPL8 285 aa10.28□□□□□ -0.76
CCDC38-208ENST00000549876 HRH3Q9Y5N1 445 aa10.28□□□□□ -0.76
CCDC38-208ENST00000549876 IL2RAP01589 272 aa10.27□□□□□ -0.77
CCDC38-208ENST00000549876 F11P03951 625 aa10.27□□□□□ -0.77
CCDC38-208ENST00000549876 THBS1P07996 1170 aa10.27□□□□□ -0.77
CCDC38-208ENST00000549876 TRERF1Q96PN7 1200 aa10.27□□□□□ -0.77
CCDC38-208ENST00000549876 ESYT1Q9BSJ8 1104 aa10.27□□□□□ -0.77
CCDC38-208ENST00000549876 RAB6BQ9NRW1 208 aa10.27□□□□□ -0.77
CCDC38-208ENST00000549876 CEP126Q9P2H0 1117 aa10.27□□□□□ -0.77
CCDC38-208ENST00000549876 FOXK2Q01167 660 aa10.26□□□□□ -0.77
CCDC38-208ENST00000549876 CNKSR1Q969H4 720 aa10.26□□□□□ -0.77
CCDC38-208ENST00000549876 CCDC85AQ96PX6 553 aaPredicted RBP10.26□□□□□ -0.77
CCDC38-208ENST00000549876 CDCA7Q9BWT1 371 aaPredicted RBP10.26□□□□□ -0.77
CCDC38-208ENST00000549876 CENPCQ03188 943 aa10.25□□□□□ -0.77
CCDC38-208ENST00000549876 NUCKS1Q9H1E3 243 aaKnown RBP10.25□□□□□ -0.77
CCDC38-208ENST00000549876 ESF1Q9H501 851 aaKnown RBP10.25□□□□□ -0.77
CCDC38-208ENST00000549876 LRRC4BQ9NT99 713 aa10.25□□□□□ -0.77
CCDC38-208ENST00000549876 CNTNAP5Q8WYK1 1306 aa10.25□□□□□ -0.77
CCDC38-208ENST00000549876 APBB1O00213 710 aa10.24□□□□□ -0.77
CCDC38-208ENST00000549876 MX2P20592 715 aa10.24□□□□□ -0.77
CCDC38-208ENST00000549876 XAGE2Q96GT9 111 aa10.23□□□□□ -0.77
CCDC38-208ENST00000549876 FHDC1Q9C0D6 1143 aaPredicted RBP10.23□□□□□ -0.77
CCDC38-208ENST00000549876 PHF20L1A8MW92 1017 aa10.22□□□□□ -0.77
CCDC38-208ENST00000549876 CFHR5Q9BXR6 569 aa10.22□□□□□ -0.77
CCDC38-208ENST00000549876 MYCP01106 439 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms