RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 ZCRB1Q8TBF4 217 aaKnown RBP18.65■□□□□ 0.58
GCN1-206ENST00000549815 CCER1Q8TC90 406 aaPredicted RBP18.65■□□□□ 0.58
GCN1-206ENST00000549815 SMG6Q86US8 1419 aaKnown RBP18.65■□□□□ 0.58
GCN1-206ENST00000549815 EIF4G2P78344 907 aaKnown RBP eCLIP18.64■□□□□ 0.57
GCN1-206ENST00000549815 USHBP1Q8N6Y0 703 aa18.64■□□□□ 0.57
GCN1-206ENST00000549815 STK32BQ9NY57 414 aa18.64■□□□□ 0.57
GCN1-206ENST00000549815 EMILIN1Q9Y6C2 1016 aa18.64■□□□□ 0.57
GCN1-206ENST00000549815 NSD2O96028 1365 aa18.64■□□□□ 0.57
GCN1-206ENST00000549815 MAP2P11137 1827 aaKnown RBP18.63■□□□□ 0.57
GCN1-206ENST00000549815 LRRC4BQ9NT99 713 aa18.63■□□□□ 0.57
GCN1-206ENST00000549815 CGNL1Q0VF96 1302 aa18.63■□□□□ 0.57
GCN1-206ENST00000549815 NCAPD2Q15021 1401 aa18.62■□□□□ 0.57
GCN1-206ENST00000549815 LY75O60449 1722 aa18.61■□□□□ 0.57
GCN1-206ENST00000549815 PRIM1P49642 420 aaKnown RBP18.6■□□□□ 0.57
GCN1-206ENST00000549815 WASHC2AQ641Q2 1341 aa18.59■□□□□ 0.57
GCN1-206ENST00000549815 ZBTB7AO95365 584 aa18.59■□□□□ 0.57
GCN1-206ENST00000549815 TATP17735 454 aaPredicted RBP18.59■□□□□ 0.57
GCN1-206ENST00000549815 ZNF827Q17R98 1081 aa18.59■□□□□ 0.57
GCN1-206ENST00000549815 RAPGEF4Q8WZA2 1011 aa18.59■□□□□ 0.57
GCN1-206ENST00000549815 PKD1L3Q7Z443 1732 aa18.58■□□□□ 0.57
GCN1-206ENST00000549815 PTGER2P43116 358 aa18.58■□□□□ 0.56
GCN1-206ENST00000549815 SLC27A3Q5K4L6 730 aa18.58■□□□□ 0.56
GCN1-206ENST00000549815 POLR3GLQ9BT43 218 aa18.58■□□□□ 0.56
GCN1-206ENST00000549815 POLKQ9UBT6 870 aa18.58■□□□□ 0.56
GCN1-206ENST00000549815 QSER1Q2KHR3 1735 aa18.57■□□□□ 0.56
GCN1-206ENST00000549815 AKT1S1Q96B36 256 aa18.57■□□□□ 0.56
GCN1-206ENST00000549815 PPP1R1BQ9UD71 204 aaPredicted RBP18.57■□□□□ 0.56
GCN1-206ENST00000549815 SYTL4Q96C24 671 aaPredicted RBP18.56■□□□□ 0.56
GCN1-206ENST00000549815 SGIP1Q9BQI5 828 aa18.56■□□□□ 0.56
GCN1-206ENST00000549815 PCDH11XQ9BZA7 1347 aa18.55■□□□□ 0.56
GCN1-206ENST00000549815 PCDH11YQ9BZA8 1340 aa18.55■□□□□ 0.56
GCN1-206ENST00000549815 PANK3Q9H999 370 aa18.55■□□□□ 0.56
GCN1-206ENST00000549815 ATF5Q9Y2D1 282 aaPredicted RBP18.55■□□□□ 0.56
GCN1-206ENST00000549815 TOGARAM1Q9Y4F4 1720 aa18.54■□□□□ 0.56
GCN1-206ENST00000549815 TUBGCP6Q96RT7 1819 aa18.54■□□□□ 0.56
GCN1-206ENST00000549815 PPM1GO15355 546 aaPredicted RBP18.54■□□□□ 0.56
GCN1-206ENST00000549815 CYP27B1O15528 508 aa18.54■□□□□ 0.56
GCN1-206ENST00000549815 EYA1Q99502 592 aa18.54■□□□□ 0.56
GCN1-206ENST00000549815 MTFR1LQ9H019 292 aa18.54■□□□□ 0.56
GCN1-206ENST00000549815 KCNQ4P56696 695 aa18.52■□□□□ 0.56
GCN1-206ENST00000549815 COL24A1Q17RW2 1714 aa18.52■□□□□ 0.55
GCN1-206ENST00000549815 ITGB4P16144 1822 aa18.51■□□□□ 0.55
GCN1-206ENST00000549815 EIF4A2Q14240 407 aaKnown RBP18.5■□□□□ 0.55
GCN1-206ENST00000549815 PNPLA7Q6ZV29 1317 aa18.49■□□□□ 0.55
GCN1-206ENST00000549815 TNNT2P45379 298 aaPredicted RBP18.49■□□□□ 0.55
GCN1-206ENST00000549815 NKX1-1Q15270 411 aaPredicted RBP18.49■□□□□ 0.55
GCN1-206ENST00000549815 CCNL1Q9UK58 526 aaPredicted RBP18.48■□□□□ 0.55
GCN1-206ENST00000549815 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.47■□□□□ 0.55
GCN1-206ENST00000549815 UTRNP46939 3433 aa18.47■□□□□ 0.55
GCN1-206ENST00000549815 TAF1LQ8IZX4 1826 aa18.46■□□□□ 0.55
GCN1-206ENST00000549815 PLEKHG2Q9H7P9 1386 aa18.46■□□□□ 0.55
GCN1-206ENST00000549815 SLC16A10Q8TF71 515 aa18.46■□□□□ 0.55
GCN1-206ENST00000549815 SPG7Q9UQ90 795 aa18.46■□□□□ 0.55
GCN1-206ENST00000549815 C5P01031 1676 aa18.46■□□□□ 0.55
GCN1-206ENST00000549815 IGSF1Q8N6C5 1336 aa18.46■□□□□ 0.55
GCN1-206ENST00000549815 PALLDQ8WX93 1383 aa18.45■□□□□ 0.54
GCN1-206ENST00000549815 MPRIPQ6WCQ1 1025 aa18.45■□□□□ 0.54
GCN1-206ENST00000549815 SYT17Q9BSW7 474 aa18.45■□□□□ 0.54
GCN1-206ENST00000549815 FHDC1Q9C0D6 1143 aaPredicted RBP18.45■□□□□ 0.54
GCN1-206ENST00000549815 KIF7Q2M1P5 1343 aa18.45■□□□□ 0.54
GCN1-206ENST00000549815 ARXQ96QS3 562 aa18.44■□□□□ 0.54
GCN1-206ENST00000549815 TFCP2L1Q9NZI6 479 aa18.44■□□□□ 0.54
GCN1-206ENST00000549815 MAP3K5Q99683 1374 aa18.43■□□□□ 0.54
GCN1-206ENST00000549815 PHKG2P15735 406 aa18.43■□□□□ 0.54
GCN1-206ENST00000549815 PIGBQ92521 554 aa18.43■□□□□ 0.54
GCN1-206ENST00000549815 AMER1Q5JTC6 1135 aaPredicted RBP18.42■□□□□ 0.54
GCN1-206ENST00000549815 MORC1Q86VD1 984 aa18.42■□□□□ 0.54
GCN1-206ENST00000549815 COL23A1Q86Y22 540 aaPredicted RBP18.41■□□□□ 0.54
GCN1-206ENST00000549815 IFNL2Q8IZJ0 200 aa18.41■□□□□ 0.54
GCN1-206ENST00000549815 KNSTRNQ9Y448 316 aa18.41■□□□□ 0.54
GCN1-206ENST00000549815 SMARCC1Q92922 1105 aaPredicted RBP18.4■□□□□ 0.54
GCN1-206ENST00000549815 C4BP0C0L5 1744 aa18.4■□□□□ 0.54
GCN1-206ENST00000549815 PER1O15534 1290 aaPredicted RBP18.38■□□□□ 0.53
GCN1-206ENST00000549815 DCAF8L1A6NGE4 600 aa18.37■□□□□ 0.53
GCN1-206ENST00000549815 YY1P25490 414 aa18.37■□□□□ 0.53
GCN1-206ENST00000549815 POLD1P28340 1107 aa18.36■□□□□ 0.53
GCN1-206ENST00000549815 UBR3Q6ZT12 1888 aa18.36■□□□□ 0.53
GCN1-206ENST00000549815 AEBP1Q8IUX7 1158 aa18.36■□□□□ 0.53
GCN1-206ENST00000549815 TMOD3Q9NYL9 352 aa18.36■□□□□ 0.53
GCN1-206ENST00000549815 KDRP35968 1356 aa18.35■□□□□ 0.53
GCN1-206ENST00000549815 HMGB2P26583 209 aaKnown RBP18.35■□□□□ 0.53
GCN1-206ENST00000549815 IL13P35225 146 aa18.35■□□□□ 0.53
GCN1-206ENST00000549815 AMIGO3Q86WK7 504 aa18.35■□□□□ 0.53
GCN1-206ENST00000549815 ASAP1Q9ULH1 1129 aa18.35■□□□□ 0.53
GCN1-206ENST00000549815 KDM6AO15550 1401 aaPredicted RBP18.34■□□□□ 0.53
GCN1-206ENST00000549815 LOC102724428A0A0B4J2F2 783 aa18.34■□□□□ 0.53
GCN1-206ENST00000549815 SIK1P57059 783 aa18.34■□□□□ 0.53
GCN1-206ENST00000549815 PLEKHO1Q53GL0 409 aaPredicted RBP18.34■□□□□ 0.53
GCN1-206ENST00000549815 ATG3Q9NT62 314 aa18.34■□□□□ 0.53
GCN1-206ENST00000549815 AMOTQ4VCS5 1084 aa18.33■□□□□ 0.52
GCN1-206ENST00000549815 FLAD1Q8NFF5 587 aa18.33■□□□□ 0.52
GCN1-206ENST00000549815 GOLGB1Q14789 3259 aaKnown RBP18.33■□□□□ 0.52
GCN1-206ENST00000549815 ZNF831Q5JPB2 1677 aa18.32■□□□□ 0.52
GCN1-206ENST00000549815 ERVV-2B6SEH9 535 aa18.32■□□□□ 0.52
GCN1-206ENST00000549815 ITPK1Q13572 414 aa18.32■□□□□ 0.52
GCN1-206ENST00000549815 LINC00116Q8NCU8 138 aa18.32■□□□□ 0.52
GCN1-206ENST00000549815 DCAF5Q96JK2 942 aa18.32■□□□□ 0.52
GCN1-206ENST00000549815 MSH5O43196 834 aa18.31■□□□□ 0.52
GCN1-206ENST00000549815 HSP90AB1P08238 724 aaKnown RBP18.31■□□□□ 0.52
GCN1-206ENST00000549815 SULT6B1Q6IMI4 303 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms