RNA–Protein interactions for RNA: ENST00000549760.1

RAB3IP-211, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-211ENST00000549760 SYTL4Q96C24 671 aaPredicted RBP29.33■■■□□ 2.29
RAB3IP-211ENST00000549760 SGIP1Q9BQI5 828 aa29.32■■■□□ 2.28
RAB3IP-211ENST00000549760 CDCA8Q53HL2 280 aa29.31■■■□□ 2.28
RAB3IP-211ENST00000549760 SLC27A3Q5K4L6 730 aa29.31■■■□□ 2.28
RAB3IP-211ENST00000549760 ZCRB1Q8TBF4 217 aaKnown RBP29.31■■■□□ 2.28
RAB3IP-211ENST00000549760 FHDC1Q9C0D6 1143 aaPredicted RBP29.31■■■□□ 2.28
RAB3IP-211ENST00000549760 NSD2O96028 1365 aa29.3■■■□□ 2.28
RAB3IP-211ENST00000549760 COL24A1Q17RW2 1714 aa29.3■■■□□ 2.28
RAB3IP-211ENST00000549760 PRIM1P49642 420 aaKnown RBP29.28■■■□□ 2.28
RAB3IP-211ENST00000549760 NBPF6Q5VWK0 638 aa29.28■■■□□ 2.28
RAB3IP-211ENST00000549760 USHBP1Q8N6Y0 703 aa29.28■■■□□ 2.28
RAB3IP-211ENST00000549760 NBPF4Q96M43 638 aa29.28■■■□□ 2.28
RAB3IP-211ENST00000549760 ANKRD26Q9UPS8 1709 aa29.28■■■□□ 2.28
RAB3IP-211ENST00000549760 AKT1S1Q96B36 256 aa29.27■■■□□ 2.28
RAB3IP-211ENST00000549760 SYT17Q9BSW7 474 aa29.27■■■□□ 2.28
RAB3IP-211ENST00000549760 CHD4Q14839 1912 aa29.27■■■□□ 2.28
RAB3IP-211ENST00000549760 FLT4P35916 1363 aa29.26■■■□□ 2.28
RAB3IP-211ENST00000549760 INSRP06213 1382 aa29.26■■■□□ 2.27
RAB3IP-211ENST00000549760 CGNL1Q0VF96 1302 aa29.25■■■□□ 2.27
RAB3IP-211ENST00000549760 RAPGEF4Q8WZA2 1011 aa29.25■■■□□ 2.27
RAB3IP-211ENST00000549760 ARXQ96QS3 562 aa29.25■■■□□ 2.27
RAB3IP-211ENST00000549760 NSD3Q9BZ95 1437 aa29.25■■■□□ 2.27
RAB3IP-211ENST00000549760 KIF24Q5T7B8 1368 aa29.25■■■□□ 2.27
RAB3IP-211ENST00000549760 PKD1L3Q7Z443 1732 aa29.24■■■□□ 2.27
RAB3IP-211ENST00000549760 C5P01031 1676 aa29.23■■■□□ 2.27
RAB3IP-211ENST00000549760 KCNQ4P56696 695 aa29.22■■■□□ 2.27
RAB3IP-211ENST00000549760 MAP3K5Q99683 1374 aa29.22■■■□□ 2.27
RAB3IP-211ENST00000549760 TOGARAM1Q9Y4F4 1720 aa29.22■■■□□ 2.27
RAB3IP-211ENST00000549760 PNPLA7Q6ZV29 1317 aa29.21■■■□□ 2.27
RAB3IP-211ENST00000549760 TATP17735 454 aaPredicted RBP29.21■■■□□ 2.27
RAB3IP-211ENST00000549760 HSP90AB2PQ58FF8 381 aa29.21■■■□□ 2.27
RAB3IP-211ENST00000549760 MAP2P11137 1827 aaKnown RBP29.2■■■□□ 2.27
RAB3IP-211ENST00000549760 ITGB4P16144 1822 aa29.2■■■□□ 2.27
RAB3IP-211ENST00000549760 SLC16A10Q8TF71 515 aa29.2■■■□□ 2.26
RAB3IP-211ENST00000549760 TAF1LQ8IZX4 1826 aa29.2■■■□□ 2.26
RAB3IP-211ENST00000549760 TFCP2L1Q9NZI6 479 aa29.19■■■□□ 2.26
RAB3IP-211ENST00000549760 PCDH11XQ9BZA7 1347 aa29.19■■■□□ 2.26
RAB3IP-211ENST00000549760 PCDH11YQ9BZA8 1340 aa29.19■■■□□ 2.26
RAB3IP-211ENST00000549760 CARD14Q9BXL6 1004 aa29.18■■■□□ 2.26
RAB3IP-211ENST00000549760 CCNL1Q9UK58 526 aaPredicted RBP29.18■■■□□ 2.26
RAB3IP-211ENST00000549760 UTRNP46939 3433 aa29.17■■■□□ 2.26
RAB3IP-211ENST00000549760 POLD1P28340 1107 aa29.15■■■□□ 2.26
RAB3IP-211ENST00000549760 TIMELESSQ9UNS1 1208 aa29.15■■■□□ 2.26
RAB3IP-211ENST00000549760 EMILIN1Q9Y6C2 1016 aa29.15■■■□□ 2.26
RAB3IP-211ENST00000549760 KLHL34Q8N239 644 aa29.12■■■□□ 2.25
RAB3IP-211ENST00000549760 NCAPD2Q15021 1401 aa29.11■■■□□ 2.25
RAB3IP-211ENST00000549760 CLSPNQ9HAW4 1339 aa29.11■■■□□ 2.25
RAB3IP-211ENST00000549760 PPM1GO15355 546 aaPredicted RBP29.09■■■□□ 2.25
RAB3IP-211ENST00000549760 PALLDQ8WX93 1383 aa29.08■■■□□ 2.25
RAB3IP-211ENST00000549760 CYP27B1O15528 508 aa29.07■■■□□ 2.24
RAB3IP-211ENST00000549760 C4BP0C0L5 1744 aa29.07■■■□□ 2.24
RAB3IP-211ENST00000549760 MSH5O43196 834 aa29.06■■■□□ 2.24
RAB3IP-211ENST00000549760 MPRIPQ6WCQ1 1025 aa29.05■■■□□ 2.24
RAB3IP-211ENST00000549760 PCGF6Q9BYE7 350 aa29.05■■■□□ 2.24
RAB3IP-211ENST00000549760 POLR3GLQ9BT43 218 aa29.04■■■□□ 2.24
RAB3IP-211ENST00000549760 WASHC2AQ641Q2 1341 aa29.03■■■□□ 2.24
RAB3IP-211ENST00000549760 GPR162Q16538 588 aa29.03■■■□□ 2.24
RAB3IP-211ENST00000549760 ZNF784Q8NCA9 323 aaPredicted RBP29.03■■■□□ 2.24
RAB3IP-211ENST00000549760 UBR3Q6ZT12 1888 aa29.03■■■□□ 2.24
RAB3IP-211ENST00000549760 COL23A1Q86Y22 540 aaPredicted RBP29.02■■■□□ 2.24
RAB3IP-211ENST00000549760 SPG7Q9UQ90 795 aa29■■■□□ 2.23
RAB3IP-211ENST00000549760 HMGB2P26583 209 aaKnown RBP28.99■■■□□ 2.23
RAB3IP-211ENST00000549760 PELP1Q8IZL8 1130 aaKnown RBP28.98■■■□□ 2.23
RAB3IP-211ENST00000549760 NLGN2Q8NFZ4 835 aa28.98■■■□□ 2.23
RAB3IP-211ENST00000549760 SMARCC1Q92922 1105 aaPredicted RBP28.98■■■□□ 2.23
RAB3IP-211ENST00000549760 MSL1Q68DK7 614 aa28.97■■■□□ 2.23
RAB3IP-211ENST00000549760 EYA1Q99502 592 aa28.97■■■□□ 2.23
RAB3IP-211ENST00000549760 POLKQ9UBT6 870 aa28.97■■■□□ 2.23
RAB3IP-211ENST00000549760 NKX1-1Q15270 411 aaPredicted RBP28.95■■■□□ 2.22
RAB3IP-211ENST00000549760 FLAD1Q8NFF5 587 aa28.95■■■□□ 2.22
RAB3IP-211ENST00000549760 GOLGB1Q14789 3259 aaKnown RBP28.95■■■□□ 2.22
RAB3IP-211ENST00000549760 PIGBQ92521 554 aa28.94■■■□□ 2.22
RAB3IP-211ENST00000549760 TNNT2P45379 298 aaPredicted RBP28.93■■■□□ 2.22
RAB3IP-211ENST00000549760 AK7Q96M32 723 aa28.93■■■□□ 2.22
RAB3IP-211ENST00000549760 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.93■■■□□ 2.22
RAB3IP-211ENST00000549760 EIF4G2P78344 907 aaKnown RBP eCLIP28.92■■■□□ 2.22
RAB3IP-211ENST00000549760 EIF4A2Q14240 407 aaKnown RBP28.9■■■□□ 2.22
RAB3IP-211ENST00000549760 TMOD3Q9NYL9 352 aa28.9■■■□□ 2.22
RAB3IP-211ENST00000549760 PLEKHG2Q9H7P9 1386 aa28.89■■■□□ 2.22
RAB3IP-211ENST00000549760 HSPA5P11021 654 aaKnown RBP28.89■■■□□ 2.22
RAB3IP-211ENST00000549760 PHKG2P15735 406 aa28.88■■■□□ 2.21
RAB3IP-211ENST00000549760 IFNL2Q8IZJ0 200 aa28.88■■■□□ 2.21
RAB3IP-211ENST00000549760 LOC102724428A0A0B4J2F2 783 aa28.86■■■□□ 2.21
RAB3IP-211ENST00000549760 PHF14O94880 888 aa28.86■■■□□ 2.21
RAB3IP-211ENST00000549760 SIK1P57059 783 aa28.86■■■□□ 2.21
RAB3IP-211ENST00000549760 AMIGO3Q86WK7 504 aa28.85■■■□□ 2.21
RAB3IP-211ENST00000549760 IGSF1Q8N6C5 1336 aa28.85■■■□□ 2.21
RAB3IP-211ENST00000549760 YBX3P16989 372 aaKnown RBP eCLIP28.84■■■□□ 2.21
RAB3IP-211ENST00000549760 PANK3Q9H999 370 aa28.84■■■□□ 2.21
RAB3IP-211ENST00000549760 ZNF831Q5JPB2 1677 aa28.83■■■□□ 2.21
RAB3IP-211ENST00000549760 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.83■■■□□ 2.21
RAB3IP-211ENST00000549760 LINC00116Q8NCU8 138 aa28.83■■■□□ 2.21
RAB3IP-211ENST00000549760 ASAP1Q9ULH1 1129 aa28.83■■■□□ 2.21
RAB3IP-211ENST00000549760 SSFA2P28290 1259 aa28.82■■■□□ 2.2
RAB3IP-211ENST00000549760 CD2APQ9Y5K6 639 aa28.82■■■□□ 2.2
RAB3IP-211ENST00000549760 COL5A3P25940 1745 aaPredicted RBP28.82■■■□□ 2.2
RAB3IP-211ENST00000549760 GRIN3BO60391 1043 aa28.81■■■□□ 2.2
RAB3IP-211ENST00000549760 SMIM5Q71RC9 77 aa28.8■■■□□ 2.2
RAB3IP-211ENST00000549760 ITPK1Q13572 414 aa28.79■■■□□ 2.2
RAB3IP-211ENST00000549760 KDRP35968 1356 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms