RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 KIF24Q5T7B8 1368 aa14.43□□□□□ -0.1
CCDC38-207ENST00000549752 CAPN15O75808 1086 aa14.42□□□□□ -0.1
CCDC38-207ENST00000549752 HOXC9P31274 260 aa14.42□□□□□ -0.1
CCDC38-207ENST00000549752 MARCH10Q8NA82 808 aaPredicted RBP14.42□□□□□ -0.1
CCDC38-207ENST00000549752 GGNBP2Q9H3C7 697 aa14.42□□□□□ -0.1
CCDC38-207ENST00000549752 CGNL1Q0VF96 1302 aa14.41□□□□□ -0.1
CCDC38-207ENST00000549752 NSD3Q9BZ95 1437 aa14.41□□□□□ -0.1
CCDC38-207ENST00000549752 PLSCR1O15162 318 aa14.41□□□□□ -0.1
CCDC38-207ENST00000549752 BTAF1O14981 1849 aa14.41□□□□□ -0.1
CCDC38-207ENST00000549752 LTV1Q96GA3 475 aaPredicted RBP14.4□□□□□ -0.1
CCDC38-207ENST00000549752 POLR3GLQ9BT43 218 aa14.4□□□□□ -0.1
CCDC38-207ENST00000549752 HSPA5P11021 654 aaKnown RBP14.39□□□□□ -0.11
CCDC38-207ENST00000549752 VASPP50552 380 aaPredicted RBP14.39□□□□□ -0.11
CCDC38-207ENST00000549752 FLT4P35916 1363 aa14.38□□□□□ -0.11
CCDC38-207ENST00000549752 PSDA5PKW4 1024 aaPredicted RBP14.38□□□□□ -0.11
CCDC38-207ENST00000549752 R3HDM1Q15032 1099 aaKnown RBP14.38□□□□□ -0.11
CCDC38-207ENST00000549752 RNF39Q9H2S5 420 aa14.38□□□□□ -0.11
CCDC38-207ENST00000549752 SHANK3Q9BYB0 1731 aa14.38□□□□□ -0.11
CCDC38-207ENST00000549752 INSRP06213 1382 aa14.37□□□□□ -0.11
CCDC38-207ENST00000549752 C1QBPQ07021 282 aaKnown RBP14.37□□□□□ -0.11
CCDC38-207ENST00000549752 RRS1Q15050 365 aaKnown RBP14.37□□□□□ -0.11
CCDC38-207ENST00000549752 CARD14Q9BXL6 1004 aa14.37□□□□□ -0.11
CCDC38-207ENST00000549752 SPINK5Q9NQ38 1064 aaPredicted RBP14.37□□□□□ -0.11
CCDC38-207ENST00000549752 DOT1LQ8TEK3 1739 aa14.36□□□□□ -0.11
CCDC38-207ENST00000549752 FBLN1P23142 703 aa14.34□□□□□ -0.11
CCDC38-207ENST00000549752 RAPGEF4Q8WZA2 1011 aa14.34□□□□□ -0.11
CCDC38-207ENST00000549752 NSD2O96028 1365 aa14.34□□□□□ -0.11
CCDC38-207ENST00000549752 ZCRB1Q8TBF4 217 aaKnown RBP14.33□□□□□ -0.12
CCDC38-207ENST00000549752 TATP17735 454 aaPredicted RBP14.32□□□□□ -0.12
CCDC38-207ENST00000549752 DDX54Q8TDD1 881 aaKnown RBP14.32□□□□□ -0.12
CCDC38-207ENST00000549752 PKD1L3Q7Z443 1732 aa14.32□□□□□ -0.12
CCDC38-207ENST00000549752 PPM1GO15355 546 aaPredicted RBP14.31□□□□□ -0.12
CCDC38-207ENST00000549752 HSP90AB2PQ58FF8 381 aa14.31□□□□□ -0.12
CCDC38-207ENST00000549752 NBPF6Q5VWK0 638 aa14.31□□□□□ -0.12
CCDC38-207ENST00000549752 ACSBG1Q96GR2 724 aa14.31□□□□□ -0.12
CCDC38-207ENST00000549752 NBPF4Q96M43 638 aa14.31□□□□□ -0.12
CCDC38-207ENST00000549752 PANK3Q9H999 370 aa14.31□□□□□ -0.12
CCDC38-207ENST00000549752 LY75O60449 1722 aa14.31□□□□□ -0.12
CCDC38-207ENST00000549752 ITGB4P16144 1822 aa14.31□□□□□ -0.12
CCDC38-207ENST00000549752 MEGF6O75095 1541 aa14.31□□□□□ -0.12
CCDC38-207ENST00000549752 QSER1Q2KHR3 1735 aa14.3□□□□□ -0.12
CCDC38-207ENST00000549752 TXNRD1Q16881 649 aa14.3□□□□□ -0.12
CCDC38-207ENST00000549752 WASHC2AQ641Q2 1341 aa14.3□□□□□ -0.12
CCDC38-207ENST00000549752 CASZ1Q86V15 1759 aa14.29□□□□□ -0.12
CCDC38-207ENST00000549752 KCNQ2O43526 872 aa14.29□□□□□ -0.12
CCDC38-207ENST00000549752 HMGB2P26583 209 aaKnown RBP14.29□□□□□ -0.12
CCDC38-207ENST00000549752 PTF1AQ7RTS3 328 aa14.29□□□□□ -0.12
CCDC38-207ENST00000549752 STK32BQ9NY57 414 aa14.29□□□□□ -0.12
CCDC38-207ENST00000549752 KNSTRNQ9Y448 316 aa14.29□□□□□ -0.12
CCDC38-207ENST00000549752 EMILIN1Q9Y6C2 1016 aa14.29□□□□□ -0.12
CCDC38-207ENST00000549752 PCDH11XQ9BZA7 1347 aa14.28□□□□□ -0.12
CCDC38-207ENST00000549752 PCDH11YQ9BZA8 1340 aa14.28□□□□□ -0.12
CCDC38-207ENST00000549752 SPON1Q9HCB6 807 aa14.27□□□□□ -0.13
CCDC38-207ENST00000549752 NCAPD2Q15021 1401 aa14.26□□□□□ -0.13
CCDC38-207ENST00000549752 PLEKHG2Q9H7P9 1386 aa14.26□□□□□ -0.13
CCDC38-207ENST00000549752 SLC27A3Q5K4L6 730 aa14.26□□□□□ -0.13
CCDC38-207ENST00000549752 USHBP1Q8N6Y0 703 aa14.26□□□□□ -0.13
CCDC38-207ENST00000549752 SYTL4Q96C24 671 aaPredicted RBP14.26□□□□□ -0.13
CCDC38-207ENST00000549752 POLKQ9UBT6 870 aa14.26□□□□□ -0.13
CCDC38-207ENST00000549752 PAPPAQ13219 1627 aa14.26□□□□□ -0.13
CCDC38-207ENST00000549752 MORC1Q86VD1 984 aa14.25□□□□□ -0.13
CCDC38-207ENST00000549752 SPG7Q9UQ90 795 aa14.25□□□□□ -0.13
CCDC38-207ENST00000549752 TAF1LQ8IZX4 1826 aa14.25□□□□□ -0.13
CCDC38-207ENST00000549752 TNNT2P45379 298 aaPredicted RBP14.24□□□□□ -0.13
CCDC38-207ENST00000549752 PRIM1P49642 420 aaKnown RBP14.24□□□□□ -0.13
CCDC38-207ENST00000549752 SLC15A2Q16348 729 aa14.24□□□□□ -0.13
CCDC38-207ENST00000549752 PPP1R1BQ9UD71 204 aaPredicted RBP14.24□□□□□ -0.13
CCDC38-207ENST00000549752 KIF7Q2M1P5 1343 aa14.23□□□□□ -0.13
CCDC38-207ENST00000549752 ANO8Q9HCE9 1232 aaPredicted RBP14.23□□□□□ -0.13
CCDC38-207ENST00000549752 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.23□□□□□ -0.13
CCDC38-207ENST00000549752 TUBGCP6Q96RT7 1819 aa14.22□□□□□ -0.13
CCDC38-207ENST00000549752 TOGARAM1Q9Y4F4 1720 aa14.21□□□□□ -0.13
CCDC38-207ENST00000549752 C5P01031 1676 aa14.21□□□□□ -0.13
CCDC38-207ENST00000549752 VIRMAQ69YN4 1812 aaKnown RBP14.21□□□□□ -0.13
CCDC38-207ENST00000549752 EYA1Q99502 592 aa14.21□□□□□ -0.13
CCDC38-207ENST00000549752 EIF4A2Q14240 407 aaKnown RBP14.2□□□□□ -0.14
CCDC38-207ENST00000549752 IGSF1Q8N6C5 1336 aa14.18□□□□□ -0.14
CCDC38-207ENST00000549752 CYP27B1O15528 508 aa14.18□□□□□ -0.14
CCDC38-207ENST00000549752 SMARCC1Q92922 1105 aaPredicted RBP14.18□□□□□ -0.14
CCDC38-207ENST00000549752 MTFR1LQ9H019 292 aa14.18□□□□□ -0.14
CCDC38-207ENST00000549752 NKX1-1Q15270 411 aaPredicted RBP14.17□□□□□ -0.14
CCDC38-207ENST00000549752 IFNL2Q8IZJ0 200 aa14.17□□□□□ -0.14
CCDC38-207ENST00000549752 CCNL1Q9UK58 526 aaPredicted RBP14.17□□□□□ -0.14
CCDC38-207ENST00000549752 COL24A1Q17RW2 1714 aa14.17□□□□□ -0.14
CCDC38-207ENST00000549752 HSP90AB1P08238 724 aaKnown RBP14.16□□□□□ -0.14
CCDC38-207ENST00000549752 MPRIPQ6WCQ1 1025 aa14.16□□□□□ -0.14
CCDC38-207ENST00000549752 IFNLR1Q8IU57 520 aaPredicted RBP14.16□□□□□ -0.14
CCDC38-207ENST00000549752 SLC16A10Q8TF71 515 aa14.16□□□□□ -0.14
CCDC38-207ENST00000549752 LRRC4BQ9NT99 713 aa14.16□□□□□ -0.14
CCDC38-207ENST00000549752 SCN11AQ9UI33 1791 aa14.15□□□□□ -0.14
CCDC38-207ENST00000549752 NPC1L1Q9UHC9 1359 aa14.15□□□□□ -0.14
CCDC38-207ENST00000549752 ZBTB7AO95365 584 aa14.15□□□□□ -0.14
CCDC38-207ENST00000549752 AMOTQ4VCS5 1084 aa14.15□□□□□ -0.14
CCDC38-207ENST00000549752 PLEKHO1Q53GL0 409 aaPredicted RBP14.15□□□□□ -0.14
CCDC38-207ENST00000549752 TFCP2L1Q9NZI6 479 aa14.15□□□□□ -0.14
CCDC38-207ENST00000549752 PALLDQ8WX93 1383 aa14.14□□□□□ -0.15
CCDC38-207ENST00000549752 AKT1S1Q96B36 256 aa14.14□□□□□ -0.15
CCDC38-207ENST00000549752 TMOD3Q9NYL9 352 aa14.14□□□□□ -0.15
CCDC38-207ENST00000549752 ZNF831Q5JPB2 1677 aa14.14□□□□□ -0.15
CCDC38-207ENST00000549752 C4BP0C0L5 1744 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms