RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 IP6K1Q92551 441 aa21.95■■□□□ 1.1
TCHP-208ENST00000549550 LTV1Q96GA3 475 aaPredicted RBP21.95■■□□□ 1.1
TCHP-208ENST00000549550 TFCP2L1Q9NZI6 479 aa21.95■■□□□ 1.1
TCHP-208ENST00000549550 SYTL4Q96C24 671 aaPredicted RBP21.94■■□□□ 1.1
TCHP-208ENST00000549550 CARD11Q9BXL7 1154 aa21.94■■□□□ 1.1
TCHP-208ENST00000549550 TERF2IPQ9NYB0 399 aa21.94■■□□□ 1.1
TCHP-208ENST00000549550 CEP350Q5VT06 3117 aa21.94■■□□□ 1.1
TCHP-208ENST00000549550 ANKRD36BQ8N2N9 1353 aa21.93■■□□□ 1.1
TCHP-208ENST00000549550 PRIM1P49642 420 aaKnown RBP21.92■■□□□ 1.1
TCHP-208ENST00000549550 NSD2O96028 1365 aa21.91■■□□□ 1.1
TCHP-208ENST00000549550 GIGYF1O75420 1035 aaPredicted RBP21.91■■□□□ 1.1
TCHP-208ENST00000549550 NLGN2Q8NFZ4 835 aa21.91■■□□□ 1.1
TCHP-208ENST00000549550 CCER1Q8TC90 406 aaPredicted RBP21.91■■□□□ 1.1
TCHP-208ENST00000549550 MEGF6O75095 1541 aa21.88■■□□□ 1.09
TCHP-208ENST00000549550 C5P01031 1676 aa21.88■■□□□ 1.09
TCHP-208ENST00000549550 MAP3K19Q56UN5 1328 aa21.87■■□□□ 1.09
TCHP-208ENST00000549550 HOXC9P31274 260 aa21.86■■□□□ 1.09
TCHP-208ENST00000549550 ZCRB1Q8TBF4 217 aaKnown RBP21.86■■□□□ 1.09
TCHP-208ENST00000549550 CCNL1Q9UK58 526 aaPredicted RBP21.86■■□□□ 1.09
TCHP-208ENST00000549550 TAF1LQ8IZX4 1826 aa21.85■■□□□ 1.09
TCHP-208ENST00000549550 COG3Q96JB2 828 aa21.85■■□□□ 1.09
TCHP-208ENST00000549550 PUS7Q96PZ0 661 aaKnown RBP21.85■■□□□ 1.09
TCHP-208ENST00000549550 MSH5O43196 834 aa21.84■■□□□ 1.09
TCHP-208ENST00000549550 YBX3P16989 372 aaKnown RBP eCLIP21.84■■□□□ 1.09
TCHP-208ENST00000549550 FBLN1P23142 703 aa21.84■■□□□ 1.09
TCHP-208ENST00000549550 AMPHP49418 695 aa21.84■■□□□ 1.09
TCHP-208ENST00000549550 USP47Q96K76 1375 aa21.83■■□□□ 1.08
TCHP-208ENST00000549550 COL23A1Q86Y22 540 aaPredicted RBP21.82■■□□□ 1.08
TCHP-208ENST00000549550 GRIN3BO60391 1043 aa21.81■■□□□ 1.08
TCHP-208ENST00000549550 RTL1A6NKG5 1358 aa21.79■■□□□ 1.08
TCHP-208ENST00000549550 MSL1Q68DK7 614 aa21.79■■□□□ 1.08
TCHP-208ENST00000549550 ITGB4P16144 1822 aa21.78■■□□□ 1.08
TCHP-208ENST00000549550 NBPF6Q5VWK0 638 aa21.78■■□□□ 1.08
TCHP-208ENST00000549550 NBPF4Q96M43 638 aa21.78■■□□□ 1.08
TCHP-208ENST00000549550 USHBP1Q8N6Y0 703 aa21.77■■□□□ 1.08
TCHP-208ENST00000549550 TESK2Q96S53 571 aa21.77■■□□□ 1.08
TCHP-208ENST00000549550 CGNL1Q0VF96 1302 aa21.77■■□□□ 1.07
TCHP-208ENST00000549550 RRS1Q15050 365 aaKnown RBP21.76■■□□□ 1.07
TCHP-208ENST00000549550 KIF20BQ96Q89 1820 aa21.76■■□□□ 1.07
TCHP-208ENST00000549550 TONSLQ96HA7 1378 aa21.75■■□□□ 1.07
TCHP-208ENST00000549550 TOGARAM1Q9Y4F4 1720 aa21.75■■□□□ 1.07
TCHP-208ENST00000549550 SMG6Q86US8 1419 aaKnown RBP21.75■■□□□ 1.07
TCHP-208ENST00000549550 ATP10DQ9P241 1426 aa21.75■■□□□ 1.07
TCHP-208ENST00000549550 RAPGEF4Q8WZA2 1011 aa21.75■■□□□ 1.07
TCHP-208ENST00000549550 C4BP0C0L5 1744 aa21.75■■□□□ 1.07
TCHP-208ENST00000549550 UBR3Q6ZT12 1888 aa21.74■■□□□ 1.07
TCHP-208ENST00000549550 ST20-MTHFSA0A0A6YYL1 179 aa21.73■■□□□ 1.07
TCHP-208ENST00000549550 IFFO2Q5TF58 517 aa21.72■■□□□ 1.07
TCHP-208ENST00000549550 CD2APQ9Y5K6 639 aa21.72■■□□□ 1.07
TCHP-208ENST00000549550 PALLDQ8WX93 1383 aa21.72■■□□□ 1.07
TCHP-208ENST00000549550 TATP17735 454 aaPredicted RBP21.71■■□□□ 1.07
TCHP-208ENST00000549550 PCDH11XQ9BZA7 1347 aa21.71■■□□□ 1.07
TCHP-208ENST00000549550 PCDH11YQ9BZA8 1340 aa21.71■■□□□ 1.07
TCHP-208ENST00000549550 PKD1L3Q7Z443 1732 aa21.7■■□□□ 1.06
TCHP-208ENST00000549550 FYB1O15117 783 aa21.7■■□□□ 1.06
TCHP-208ENST00000549550 FLAD1Q8NFF5 587 aa21.7■■□□□ 1.06
TCHP-208ENST00000549550 GGNBP2Q9H3C7 697 aa21.7■■□□□ 1.06
TCHP-208ENST00000549550 MPRIPQ6WCQ1 1025 aa21.69■■□□□ 1.06
TCHP-208ENST00000549550 INSRP06213 1382 aa21.68■■□□□ 1.06
TCHP-208ENST00000549550 ADCY9O60503 1353 aa21.67■■□□□ 1.06
TCHP-208ENST00000549550 SLC24A1O60721 1099 aa21.67■■□□□ 1.06
TCHP-208ENST00000549550 HMGB2P26583 209 aaKnown RBP21.67■■□□□ 1.06
TCHP-208ENST00000549550 HSP90AB2PQ58FF8 381 aa21.67■■□□□ 1.06
TCHP-208ENST00000549550 GPBP1L1Q9HC44 474 aaPredicted RBP21.67■■□□□ 1.06
TCHP-208ENST00000549550 MAP2P11137 1827 aaKnown RBP21.66■■□□□ 1.06
TCHP-208ENST00000549550 FLT4P35916 1363 aa21.65■■□□□ 1.06
TCHP-208ENST00000549550 CYP27B1O15528 508 aa21.65■■□□□ 1.06
TCHP-208ENST00000549550 AMIGO3Q86WK7 504 aa21.65■■□□□ 1.06
TCHP-208ENST00000549550 AK7Q96M32 723 aa21.65■■□□□ 1.06
TCHP-208ENST00000549550 ZNF526Q8TF50 670 aaPredicted RBP21.64■■□□□ 1.05
TCHP-208ENST00000549550 PHF14O94880 888 aa21.63■■□□□ 1.05
TCHP-208ENST00000549550 SMARCC1Q92922 1105 aaPredicted RBP21.63■■□□□ 1.05
TCHP-208ENST00000549550 KIF24Q5T7B8 1368 aa21.62■■□□□ 1.05
TCHP-208ENST00000549550 IGSF1Q8N6C5 1336 aa21.62■■□□□ 1.05
TCHP-208ENST00000549550 SMIM5Q71RC9 77 aa21.62■■□□□ 1.05
TCHP-208ENST00000549550 WWC3Q9ULE0 1092 aa21.62■■□□□ 1.05
TCHP-208ENST00000549550 NSD3Q9BZ95 1437 aa21.62■■□□□ 1.05
TCHP-208ENST00000549550 ANKRD26Q9UPS8 1709 aa21.61■■□□□ 1.05
TCHP-208ENST00000549550 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.6■■□□□ 1.05
TCHP-208ENST00000549550 TMF1P82094 1093 aa21.6■■□□□ 1.05
TCHP-208ENST00000549550 PIGBQ92521 554 aa21.6■■□□□ 1.05
TCHP-208ENST00000549550 HSPA6P17066 643 aa21.59■■□□□ 1.05
TCHP-208ENST00000549550 TIMELESSQ9UNS1 1208 aa21.58■■□□□ 1.05
TCHP-208ENST00000549550 KIF13BQ9NQT8 1826 aa21.57■■□□□ 1.04
TCHP-208ENST00000549550 NCAPD2Q15021 1401 aa21.57■■□□□ 1.04
TCHP-208ENST00000549550 SSFA2P28290 1259 aa21.57■■□□□ 1.04
TCHP-208ENST00000549550 EMILIN1Q9Y6C2 1016 aa21.57■■□□□ 1.04
TCHP-208ENST00000549550 N4BP2Q86UW6 1770 aaPredicted RBP21.56■■□□□ 1.04
TCHP-208ENST00000549550 CICQ96RK0 1608 aaPredicted RBP21.56■■□□□ 1.04
TCHP-208ENST00000549550 LINC00116Q8NCU8 138 aa21.56■■□□□ 1.04
TCHP-208ENST00000549550 KIAA1551Q9HCM1 1747 aa21.55■■□□□ 1.04
TCHP-208ENST00000549550 LOC102724428A0A0B4J2F2 783 aa21.55■■□□□ 1.04
TCHP-208ENST00000549550 SIK1P57059 783 aa21.55■■□□□ 1.04
TCHP-208ENST00000549550 NKX1-1Q15270 411 aaPredicted RBP21.55■■□□□ 1.04
TCHP-208ENST00000549550 SPG7Q9UQ90 795 aa21.54■■□□□ 1.04
TCHP-208ENST00000549550 PPM1GO15355 546 aaPredicted RBP21.53■■□□□ 1.04
TCHP-208ENST00000549550 GNPATO15228 680 aa21.52■■□□□ 1.04
TCHP-208ENST00000549550 CARD14Q9BXL6 1004 aa21.52■■□□□ 1.04
TCHP-208ENST00000549550 TMOD3Q9NYL9 352 aa21.52■■□□□ 1.04
TCHP-208ENST00000549550 ITPK1Q13572 414 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms