RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 LY75O60449 1722 aa12.27□□□□□ -0.45
SMARCD1-207ENST00000549526 CPSF1Q10570 1443 aaKnown RBP12.27□□□□□ -0.45
SMARCD1-207ENST00000549526 SLIT3O75094 1523 aa12.27□□□□□ -0.45
SMARCD1-207ENST00000549526 CICQ96RK0 1608 aaPredicted RBP12.26□□□□□ -0.45
SMARCD1-207ENST00000549526 PRIM1P49642 420 aaKnown RBP12.26□□□□□ -0.45
SMARCD1-207ENST00000549526 FLAD1Q8NFF5 587 aa12.26□□□□□ -0.45
SMARCD1-207ENST00000549526 FOXN1O15353 648 aa12.25□□□□□ -0.45
SMARCD1-207ENST00000549526 C9orf131Q5VYM1 1079 aa12.25□□□□□ -0.45
SMARCD1-207ENST00000549526 KCPQ6ZWJ8 1503 aa12.24□□□□□ -0.45
SMARCD1-207ENST00000549526 KCNH5Q8NCM2 988 aa12.24□□□□□ -0.45
SMARCD1-207ENST00000549526 ABHD8Q96I13 439 aa12.24□□□□□ -0.45
SMARCD1-207ENST00000549526 KIAA1210Q9ULL0 1709 aa12.23□□□□□ -0.45
SMARCD1-207ENST00000549526 PLEKHG2Q9H7P9 1386 aa12.22□□□□□ -0.45
SMARCD1-207ENST00000549526 PPARGC1BQ86YN6 1023 aaKnown RBP12.22□□□□□ -0.45
SMARCD1-207ENST00000549526 N4BP2Q86UW6 1770 aaPredicted RBP12.21□□□□□ -0.45
SMARCD1-207ENST00000549526 A0A0G2JLW4 131 aa12.21□□□□□ -0.45
SMARCD1-207ENST00000549526 CCDC85CA6NKD9 419 aa12.21□□□□□ -0.45
SMARCD1-207ENST00000549526 SRPK2P78362 688 aaKnown RBP12.21□□□□□ -0.45
SMARCD1-207ENST00000549526 AIDAQ96BJ3 306 aa12.21□□□□□ -0.45
SMARCD1-207ENST00000549526 KDM2AQ9Y2K7 1162 aa12.21□□□□□ -0.45
SMARCD1-207ENST00000549526 TNRC6CQ9HCJ0 1690 aaKnown RBP12.2□□□□□ -0.46
SMARCD1-207ENST00000549526 FCHSD2O94868 740 aa12.2□□□□□ -0.46
SMARCD1-207ENST00000549526 CTCFP49711 727 aaPredicted RBP12.2□□□□□ -0.46
SMARCD1-207ENST00000549526 SMIM5Q71RC9 77 aa12.2□□□□□ -0.46
SMARCD1-207ENST00000549526 MPHOSPH9Q99550 1183 aa12.2□□□□□ -0.46
SMARCD1-207ENST00000549526 MKRN1Q9UHC7 482 aaKnown RBP12.2□□□□□ -0.46
SMARCD1-207ENST00000549526 C10orf71Q711Q0 1435 aa12.2□□□□□ -0.46
SMARCD1-207ENST00000549526 ANKRD36BQ8N2N9 1353 aa12.19□□□□□ -0.46
SMARCD1-207ENST00000549526 USP47Q96K76 1375 aa12.19□□□□□ -0.46
SMARCD1-207ENST00000549526 HMGB2P26583 209 aaKnown RBP12.19□□□□□ -0.46
SMARCD1-207ENST00000549526 RGS19P49795 217 aa12.19□□□□□ -0.46
SMARCD1-207ENST00000549526 PKD1L3Q7Z443 1732 aa12.19□□□□□ -0.46
SMARCD1-207ENST00000549526 C5P01031 1676 aa12.19□□□□□ -0.46
SMARCD1-207ENST00000549526 PHF14O94880 888 aa12.18□□□□□ -0.46
SMARCD1-207ENST00000549526 LBX1P52954 281 aa12.18□□□□□ -0.46
SMARCD1-207ENST00000549526 TGFB2P61812 414 aa12.18□□□□□ -0.46
SMARCD1-207ENST00000549526 CABP1Q9NZU7 370 aa12.18□□□□□ -0.46
SMARCD1-207ENST00000549526 RNF181Q9P0P0 153 aa12.18□□□□□ -0.46
SMARCD1-207ENST00000549526 USP54Q70EL1 1684 aa12.18□□□□□ -0.46
SMARCD1-207ENST00000549526 TNRC18O15417 2968 aaPredicted RBP12.18□□□□□ -0.46
SMARCD1-207ENST00000549526 DOT1LQ8TEK3 1739 aa12.17□□□□□ -0.46
SMARCD1-207ENST00000549526 CABP2Q9NPB3 220 aa12.17□□□□□ -0.46
SMARCD1-207ENST00000549526 ERBB3P21860 1342 aa12.16□□□□□ -0.46
SMARCD1-207ENST00000549526 PXDNLA1KZ92 1463 aa12.16□□□□□ -0.46
SMARCD1-207ENST00000549526 VEGFAP15692 232 aaPredicted RBP12.16□□□□□ -0.46
SMARCD1-207ENST00000549526 AK7Q96M32 723 aa12.16□□□□□ -0.46
SMARCD1-207ENST00000549526 NSD2O96028 1365 aa12.16□□□□□ -0.46
SMARCD1-207ENST00000549526 TAF1LQ8IZX4 1826 aa12.16□□□□□ -0.46
SMARCD1-207ENST00000549526 DCAF11Q8TEB1 546 aa12.15□□□□□ -0.46
SMARCD1-207ENST00000549526 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.14□□□□□ -0.47
SMARCD1-207ENST00000549526 DPEP1P16444 411 aa12.14□□□□□ -0.47
SMARCD1-207ENST00000549526 AMIGO3Q86WK7 504 aa12.14□□□□□ -0.47
SMARCD1-207ENST00000549526 ANKRD24Q8TF21 1146 aa12.14□□□□□ -0.47
SMARCD1-207ENST00000549526 CREBZFQ9NS37 354 aa12.14□□□□□ -0.47
SMARCD1-207ENST00000549526 KIF13BQ9NQT8 1826 aa12.14□□□□□ -0.47
SMARCD1-207ENST00000549526 MMP10P09238 476 aa12.13□□□□□ -0.47
SMARCD1-207ENST00000549526 CFAP44Q96MT7 982 aa12.13□□□□□ -0.47
SMARCD1-207ENST00000549526 KIAA1551Q9HCM1 1747 aa12.13□□□□□ -0.47
SMARCD1-207ENST00000549526 SBF1O95248 1867 aa12.12□□□□□ -0.47
SMARCD1-207ENST00000549526 TTC21BQ7Z4L5 1316 aa12.11□□□□□ -0.47
SMARCD1-207ENST00000549526 C4BP0C0L5 1744 aa12.11□□□□□ -0.47
SMARCD1-207ENST00000549526 ARFGEF1Q9Y6D6 1849 aa12.11□□□□□ -0.47
SMARCD1-207ENST00000549526 UBR3Q6ZT12 1888 aa12.11□□□□□ -0.47
SMARCD1-207ENST00000549526 QRICH2Q9H0J4 1663 aa12.11□□□□□ -0.47
SMARCD1-207ENST00000549526 NFAT5O94916 1531 aa12.11□□□□□ -0.47
SMARCD1-207ENST00000549526 ZCRB1Q8TBF4 217 aaKnown RBP12.1□□□□□ -0.47
SMARCD1-207ENST00000549526 BRCA1P38398 1863 aaKnown RBP12.1□□□□□ -0.47
SMARCD1-207ENST00000549526 GLTPD2A6NH11 291 aa12.09□□□□□ -0.47
SMARCD1-207ENST00000549526 SSFA2P28290 1259 aa12.09□□□□□ -0.47
SMARCD1-207ENST00000549526 ZNF692Q9BU19 519 aaPredicted RBP12.09□□□□□ -0.47
SMARCD1-207ENST00000549526 WBP1LQ9NX94 342 aa12.09□□□□□ -0.47
SMARCD1-207ENST00000549526 PIM2Q9P1W9 311 aa12.09□□□□□ -0.47
SMARCD1-207ENST00000549526 LTN1O94822 1766 aa12.09□□□□□ -0.47
SMARCD1-207ENST00000549526 NSD3Q9BZ95 1437 aa12.09□□□□□ -0.47
SMARCD1-207ENST00000549526 TOGARAM1Q9Y4F4 1720 aa12.08□□□□□ -0.47
SMARCD1-207ENST00000549526 CNTNAP1P78357 1384 aa12.08□□□□□ -0.48
SMARCD1-207ENST00000549526 DALRD3Q5D0E6 543 aaKnown RBP12.08□□□□□ -0.48
SMARCD1-207ENST00000549526 PALLDQ8WX93 1383 aa12.07□□□□□ -0.48
SMARCD1-207ENST00000549526 HSPA8P11142 646 aaKnown RBP12.07□□□□□ -0.48
SMARCD1-207ENST00000549526 KCNA3P22001 575 aa12.07□□□□□ -0.48
SMARCD1-207ENST00000549526 VEGFBP49765 207 aa12.07□□□□□ -0.48
SMARCD1-207ENST00000549526 PDE4DIPQ5VU43 2346 aa12.07□□□□□ -0.48
SMARCD1-207ENST00000549526 LTV1Q96GA3 475 aaPredicted RBP12.07□□□□□ -0.48
SMARCD1-207ENST00000549526 DCAF5Q96JK2 942 aa12.07□□□□□ -0.48
SMARCD1-207ENST00000549526 CCDC87Q9NVE4 849 aa12.07□□□□□ -0.48
SMARCD1-207ENST00000549526 TTC21AQ8NDW8 1320 aa12.07□□□□□ -0.48
SMARCD1-207ENST00000549526 MPRIPQ6WCQ1 1025 aa12.06□□□□□ -0.48
SMARCD1-207ENST00000549526 STAC3Q96MF2 364 aa12.06□□□□□ -0.48
SMARCD1-207ENST00000549526 NLGN1Q8N2Q7 840 aa12.05□□□□□ -0.48
SMARCD1-207ENST00000549526 VIRMAQ69YN4 1812 aaKnown RBP12.04□□□□□ -0.48
SMARCD1-207ENST00000549526 GNPATO15228 680 aa12.04□□□□□ -0.48
SMARCD1-207ENST00000549526 TMF1P82094 1093 aa12.04□□□□□ -0.48
SMARCD1-207ENST00000549526 CHADLQ6NUI6 762 aa12.04□□□□□ -0.48
SMARCD1-207ENST00000549526 ZC3H4Q9UPT8 1303 aaKnown RBP12.04□□□□□ -0.48
SMARCD1-207ENST00000549526 POTECB2RU33 542 aa12.03□□□□□ -0.48
SMARCD1-207ENST00000549526 SMARCC1Q92922 1105 aaPredicted RBP12.03□□□□□ -0.48
SMARCD1-207ENST00000549526 PARP3Q9Y6F1 533 aa12.03□□□□□ -0.48
SMARCD1-207ENST00000549526 CCDC88AQ3V6T2 1871 aa12.03□□□□□ -0.48
SMARCD1-207ENST00000549526 MAP2K1Q02750 393 aaPredicted RBP12.02□□□□□ -0.49
SMARCD1-207ENST00000549526 RASSF7Q02833 373 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms