RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 PXDNQ92626 1479 aa12.77□□□□□ -0.36
RAB5B-206ENST00000549505 NLRP6P59044 892 aa12.77□□□□□ -0.37
RAB5B-206ENST00000549505 NOB1Q9ULX3 412 aaKnown RBP12.77□□□□□ -0.37
RAB5B-206ENST00000549505 PCDHB15Q9Y5E8 787 aa12.77□□□□□ -0.37
RAB5B-206ENST00000549505 RWDD1Q9H446 243 aaPredicted RBP12.76□□□□□ -0.37
RAB5B-206ENST00000549505 ARHGEF25Q86VW2 580 aa12.75□□□□□ -0.37
RAB5B-206ENST00000549505 SMC5Q8IY18 1101 aa12.75□□□□□ -0.37
RAB5B-206ENST00000549505 PXDNLA1KZ92 1463 aa12.75□□□□□ -0.37
RAB5B-206ENST00000549505 MTHFSDQ2M296 383 aaKnown RBP12.75□□□□□ -0.37
RAB5B-206ENST00000549505 ABTB2Q8N961 1025 aa12.75□□□□□ -0.37
RAB5B-206ENST00000549505 TNNQ9UQP3 1299 aa12.75□□□□□ -0.37
RAB5B-206ENST00000549505 IBTKQ9P2D0 1353 aaPredicted RBP12.75□□□□□ -0.37
RAB5B-206ENST00000549505 MAP3K5Q99683 1374 aa12.74□□□□□ -0.37
RAB5B-206ENST00000549505 CANXP27824 592 aaKnown RBP12.74□□□□□ -0.37
RAB5B-206ENST00000549505 TWISTNBQ3B726 338 aaPredicted RBP12.74□□□□□ -0.37
RAB5B-206ENST00000549505 C8orf34Q49A92 452 aa12.74□□□□□ -0.37
RAB5B-206ENST00000549505 PTPRCP08575 1304 aa12.74□□□□□ -0.37
RAB5B-206ENST00000549505 MSH5O43196 834 aa12.74□□□□□ -0.37
RAB5B-206ENST00000549505 FAM161AQ3B820 660 aa12.74□□□□□ -0.37
RAB5B-206ENST00000549505 AMPHP49418 695 aa12.73□□□□□ -0.37
RAB5B-206ENST00000549505 INTS3Q68E01 1043 aaKnown RBP12.73□□□□□ -0.37
RAB5B-206ENST00000549505 C8orf58Q8NAV2 365 aa12.73□□□□□ -0.37
RAB5B-206ENST00000549505 FRAT1Q92837 279 aaPredicted RBP12.73□□□□□ -0.37
RAB5B-206ENST00000549505 API5Q9BZZ5 524 aaKnown RBP12.73□□□□□ -0.37
RAB5B-206ENST00000549505 PKD1L3Q7Z443 1732 aa12.73□□□□□ -0.37
RAB5B-206ENST00000549505 PARP4Q9UKK3 1724 aaKnown RBP12.73□□□□□ -0.37
RAB5B-206ENST00000549505 RGPD2P0DJD1 1756 aa12.73□□□□□ -0.37
RAB5B-206ENST00000549505 NUTM2FA1L443 756 aa12.73□□□□□ -0.37
RAB5B-206ENST00000549505 ZBTB7BO15156 539 aaPredicted RBP12.73□□□□□ -0.37
RAB5B-206ENST00000549505 TSPYL6Q8N831 410 aa12.73□□□□□ -0.37
RAB5B-206ENST00000549505 CPDO75976 1380 aa12.72□□□□□ -0.37
RAB5B-206ENST00000549505 TMEM57Q8N5G2 664 aa12.72□□□□□ -0.37
RAB5B-206ENST00000549505 TMEM94Q12767 1356 aa12.72□□□□□ -0.37
RAB5B-206ENST00000549505 FTSJ3Q8IY81 847 aaKnown RBP12.71□□□□□ -0.37
RAB5B-206ENST00000549505 THUMPD2Q9BTF0 503 aaKnown RBP12.71□□□□□ -0.37
RAB5B-206ENST00000549505 MRC1P22897 1456 aa12.71□□□□□ -0.38
RAB5B-206ENST00000549505 FAM83GA6ND36 823 aa12.71□□□□□ -0.38
RAB5B-206ENST00000549505 ABCA3Q99758 1704 aa12.7□□□□□ -0.38
RAB5B-206ENST00000549505 TNS3Q68CZ2 1445 aa12.7□□□□□ -0.38
RAB5B-206ENST00000549505 NHSL1Q5SYE7 1610 aa12.7□□□□□ -0.38
RAB5B-206ENST00000549505 HOXB7P09629 217 aa12.7□□□□□ -0.38
RAB5B-206ENST00000549505 ESCO1Q5FWF5 840 aa12.7□□□□□ -0.38
RAB5B-206ENST00000549505 GNAT3A8MTJ3 354 aa12.7□□□□□ -0.38
RAB5B-206ENST00000549505 PSME1Q06323 249 aa12.7□□□□□ -0.38
RAB5B-206ENST00000549505 PROSER2Q86WR7 435 aaPredicted RBP12.7□□□□□ -0.38
RAB5B-206ENST00000549505 IPO9Q96P70 1041 aaKnown RBP12.7□□□□□ -0.38
RAB5B-206ENST00000549505 BCL2L13Q9BXK5 485 aa12.7□□□□□ -0.38
RAB5B-206ENST00000549505 HEG1Q9ULI3 1381 aa12.7□□□□□ -0.38
RAB5B-206ENST00000549505 GCP02774 474 aa12.68□□□□□ -0.38
RAB5B-206ENST00000549505 ORAI2Q96SN7 254 aa12.68□□□□□ -0.38
RAB5B-206ENST00000549505 AMOTQ4VCS5 1084 aa12.67□□□□□ -0.38
RAB5B-206ENST00000549505 KRT28Q7Z3Y7 464 aa12.67□□□□□ -0.38
RAB5B-206ENST00000549505 CADPS2Q86UW7 1296 aa12.67□□□□□ -0.38
RAB5B-206ENST00000549505 SCN11AQ9UI33 1791 aa12.67□□□□□ -0.38
RAB5B-206ENST00000549505 ATP10DQ9P241 1426 aa12.67□□□□□ -0.38
RAB5B-206ENST00000549505 RGPD5Q99666 1765 aa12.67□□□□□ -0.38
RAB5B-206ENST00000549505 GCC1Q96CN9 775 aa12.66□□□□□ -0.38
RAB5B-206ENST00000549505 NUCB1Q02818 461 aa12.66□□□□□ -0.38
RAB5B-206ENST00000549505 DCTN1Q14203 1278 aa12.66□□□□□ -0.38
RAB5B-206ENST00000549505 MCM10Q7L590 875 aa12.66□□□□□ -0.38
RAB5B-206ENST00000549505 IL17REQ8NFR9 667 aa12.66□□□□□ -0.38
RAB5B-206ENST00000549505 PDZRN3Q9UPQ7 1066 aa12.66□□□□□ -0.38
RAB5B-206ENST00000549505 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.66□□□□□ -0.38
RAB5B-206ENST00000549505 ANP32AP39687 249 aaKnown RBP12.65□□□□□ -0.38
RAB5B-206ENST00000549505 NBPF6Q5VWK0 638 aa12.65□□□□□ -0.38
RAB5B-206ENST00000549505 RTF1Q92541 710 aaKnown RBP12.65□□□□□ -0.38
RAB5B-206ENST00000549505 NBPF4Q96M43 638 aa12.65□□□□□ -0.38
RAB5B-206ENST00000549505 CHMP4AQ9BY43 222 aa12.65□□□□□ -0.38
RAB5B-206ENST00000549505 NPHP3Q7Z494 1330 aa12.65□□□□□ -0.38
RAB5B-206ENST00000549505 TAF7Q15545 349 aaPredicted RBP12.65□□□□□ -0.38
RAB5B-206ENST00000549505 AKAP4Q5JQC9 854 aa12.65□□□□□ -0.38
RAB5B-206ENST00000549505 ITPRIPQ8IWB1 547 aa12.65□□□□□ -0.38
RAB5B-206ENST00000549505 SPATA31A3Q5VYP0 1347 aa12.64□□□□□ -0.39
RAB5B-206ENST00000549505 KDM4FA0A1W2PPD8 638 aa12.64□□□□□ -0.39
RAB5B-206ENST00000549505 FOXO3O43524 673 aa12.64□□□□□ -0.39
RAB5B-206ENST00000549505 DDRGK1Q96HY6 314 aa12.62□□□□□ -0.39
RAB5B-206ENST00000549505 LAS1LQ9Y4W2 734 aaKnown RBP12.62□□□□□ -0.39
RAB5B-206ENST00000549505 PAPPAQ13219 1627 aa12.62□□□□□ -0.39
RAB5B-206ENST00000549505 COL22A1Q8NFW1 1626 aaPredicted RBP12.62□□□□□ -0.39
RAB5B-206ENST00000549505 ERBB3P21860 1342 aa12.62□□□□□ -0.39
RAB5B-206ENST00000549505 SOS2Q07890 1332 aaPredicted RBP12.62□□□□□ -0.39
RAB5B-206ENST00000549505 GLI3P10071 1580 aa12.62□□□□□ -0.39
RAB5B-206ENST00000549505 PAK3O75914 559 aaPredicted RBP12.62□□□□□ -0.39
RAB5B-206ENST00000549505 ATF3P18847 181 aa12.62□□□□□ -0.39
RAB5B-206ENST00000549505 SIRT2Q8IXJ6 389 aa12.62□□□□□ -0.39
RAB5B-206ENST00000549505 PLEKHO1Q53GL0 409 aaPredicted RBP12.61□□□□□ -0.39
RAB5B-206ENST00000549505 RPAP2Q8IXW5 612 aaPredicted RBP12.61□□□□□ -0.39
RAB5B-206ENST00000549505 TSPYL4Q9UJ04 414 aa12.61□□□□□ -0.39
RAB5B-206ENST00000549505 CCT4P50991 539 aaKnown RBP12.6□□□□□ -0.39
RAB5B-206ENST00000549505 TUBGCP6Q96RT7 1819 aa12.6□□□□□ -0.39
RAB5B-206ENST00000549505 SKAP1Q86WV1 359 aa12.6□□□□□ -0.39
RAB5B-206ENST00000549505 ANKRD44Q8N8A2 993 aa12.6□□□□□ -0.39
RAB5B-206ENST00000549505 NOP58Q9Y2X3 529 aaKnown RBP12.6□□□□□ -0.39
RAB5B-206ENST00000549505 CCDC30Q5VVM6 783 aa12.6□□□□□ -0.39
RAB5B-206ENST00000549505 ANKRD24Q8TF21 1146 aa12.6□□□□□ -0.39
RAB5B-206ENST00000549505 DCTPP1Q9H773 170 aa12.6□□□□□ -0.39
RAB5B-206ENST00000549505 NUTM2GQ5VZR2 741 aa12.59□□□□□ -0.39
RAB5B-206ENST00000549505 SHANK3Q9BYB0 1731 aa12.58□□□□□ -0.39
RAB5B-206ENST00000549505 EIF4A1P60842 406 aaKnown RBP12.58□□□□□ -0.4
RAB5B-206ENST00000549505 LAMB4A4D0S4 1761 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms