RNA–Protein interactions for RNA: ENST00000549499.1

FGD6-205, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

TSL 1 (best) BASIC

Gene FGD6, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-205ENST00000549499 PTGER2P43116 358 aa9.65□□□□□ -0.87
FGD6-205ENST00000549499 THUMPD2Q9BTF0 503 aaKnown RBP9.65□□□□□ -0.87
FGD6-205ENST00000549499 TBC1D2BQ9UPU7 963 aa9.65□□□□□ -0.87
FGD6-205ENST00000549499 NHSL1Q5SYE7 1610 aa9.64□□□□□ -0.87
FGD6-205ENST00000549499 MTHFSP49914 203 aa9.64□□□□□ -0.87
FGD6-205ENST00000549499 EIF4G2P78344 907 aaKnown RBP eCLIP9.64□□□□□ -0.87
FGD6-205ENST00000549499 SHPRHQ149N8 1683 aa9.64□□□□□ -0.87
FGD6-205ENST00000549499 ADGRB1O14514 1584 aa9.64□□□□□ -0.87
FGD6-205ENST00000549499 OVOS2A0A0G2JMS6 1433 aa9.64□□□□□ -0.87
FGD6-205ENST00000549499 OVOS2A0A0J9YW53 1432 aa9.64□□□□□ -0.87
FGD6-205ENST00000549499 OVOS2Q6IE36 1432 aa9.64□□□□□ -0.87
FGD6-205ENST00000549499 RRP7AQ9Y3A4 280 aaKnown RBP9.64□□□□□ -0.87
FGD6-205ENST00000549499 CABP4P57796 275 aa9.63□□□□□ -0.87
FGD6-205ENST00000549499 BRD4O60885 1362 aaPredicted RBP9.63□□□□□ -0.87
FGD6-205ENST00000549499 TULP4Q9NRJ4 1543 aa9.63□□□□□ -0.87
FGD6-205ENST00000549499 LAMA2P24043 3122 aaKnown RBP9.63□□□□□ -0.87
FGD6-205ENST00000549499 CDC42BPGQ6DT37 1551 aa9.63□□□□□ -0.87
FGD6-205ENST00000549499 NPM2Q86SE8 214 aaKnown RBP9.63□□□□□ -0.87
FGD6-205ENST00000549499 EIF3AQ14152 1382 aaKnown RBP9.62□□□□□ -0.87
FGD6-205ENST00000549499 MTFR1LQ9H019 292 aa9.62□□□□□ -0.87
FGD6-205ENST00000549499 GPBP1L1Q9HC44 474 aaPredicted RBP9.62□□□□□ -0.87
FGD6-205ENST00000549499 SBNO2Q9Y2G9 1366 aa9.62□□□□□ -0.87
FGD6-205ENST00000549499 ITPK1Q13572 414 aa9.62□□□□□ -0.87
FGD6-205ENST00000549499 POLKQ9UBT6 870 aa9.62□□□□□ -0.87
FGD6-205ENST00000549499 NSD3Q9BZ95 1437 aa9.62□□□□□ -0.87
FGD6-205ENST00000549499 FCHSD2O94868 740 aa9.62□□□□□ -0.87
FGD6-205ENST00000549499 EIF4A2Q14240 407 aaKnown RBP9.62□□□□□ -0.87
FGD6-205ENST00000549499 PNPLA7Q6ZV29 1317 aa9.61□□□□□ -0.87
FGD6-205ENST00000549499 LOC102724428A0A0B4J2F2 783 aa9.61□□□□□ -0.87
FGD6-205ENST00000549499 RFC4P35249 363 aa9.61□□□□□ -0.87
FGD6-205ENST00000549499 SIK1P57059 783 aa9.61□□□□□ -0.87
FGD6-205ENST00000549499 PRAMEF22A3QJZ6 481 aa9.61□□□□□ -0.87
FGD6-205ENST00000549499 ANXA1P04083 346 aa9.61□□□□□ -0.87
FGD6-205ENST00000549499 DDX10Q13206 875 aaKnown RBP9.61□□□□□ -0.87
FGD6-205ENST00000549499 SLC51AQ86UW1 340 aa9.61□□□□□ -0.87
FGD6-205ENST00000549499 ZNF622Q969S3 477 aaKnown RBP eCLIP9.61□□□□□ -0.87
FGD6-205ENST00000549499 CDK12Q9NYV4 1490 aaPredicted RBP9.61□□□□□ -0.87
FGD6-205ENST00000549499 OLFM4Q6UX06 510 aa9.61□□□□□ -0.87
FGD6-205ENST00000549499 AATKQ6ZMQ8 1374 aa9.61□□□□□ -0.87
FGD6-205ENST00000549499 ELL2O00472 640 aaPredicted RBP9.6□□□□□ -0.87
FGD6-205ENST00000549499 C1orf141Q5JVX7 400 aa9.6□□□□□ -0.87
FGD6-205ENST00000549499 USP19O94966 1318 aa9.6□□□□□ -0.87
FGD6-205ENST00000549499 POLR3AO14802 1390 aaPredicted RBP9.6□□□□□ -0.87
FGD6-205ENST00000549499 LINC00116Q8NCU8 138 aa9.6□□□□□ -0.87
FGD6-205ENST00000549499 CPSF1Q10570 1443 aaKnown RBP9.6□□□□□ -0.87
FGD6-205ENST00000549499 PLSCR1O15162 318 aa9.6□□□□□ -0.87
FGD6-205ENST00000549499 KCNQ3O43525 872 aa9.6□□□□□ -0.87
FGD6-205ENST00000549499 DNAJC10Q8IXB1 793 aa9.6□□□□□ -0.87
FGD6-205ENST00000549499 DISP2A7MBM2 1401 aa9.59□□□□□ -0.87
FGD6-205ENST00000549499 U2AF1L5P0DN76 240 aaPredicted RBP9.59□□□□□ -0.87
FGD6-205ENST00000549499 U2AF1Q01081 240 aaKnown RBP eCLIP9.59□□□□□ -0.87
FGD6-205ENST00000549499 MCM10Q7L590 875 aa9.59□□□□□ -0.87
FGD6-205ENST00000549499 NMRK2Q9NPI5 230 aa9.59□□□□□ -0.87
FGD6-205ENST00000549499 THRAP3Q9Y2W1 955 aaKnown RBP9.59□□□□□ -0.87
FGD6-205ENST00000549499 ANKARQ7Z5J8 1434 aa9.59□□□□□ -0.87
FGD6-205ENST00000549499 CFAP44Q96MT7 982 aa9.59□□□□□ -0.87
FGD6-205ENST00000549499 LAMA3Q16787 3333 aa9.59□□□□□ -0.87
FGD6-205ENST00000549499 RANBP2P49792 3224 aaKnown RBP9.58□□□□□ -0.88
FGD6-205ENST00000549499 GIGYF1O75420 1035 aaPredicted RBP9.58□□□□□ -0.88
FGD6-205ENST00000549499 ECM2O94769 699 aaPredicted RBP9.58□□□□□ -0.88
FGD6-205ENST00000549499 PALLDQ8WX93 1383 aa9.58□□□□□ -0.88
FGD6-205ENST00000549499 FMN2Q9NZ56 1722 aa9.58□□□□□ -0.88
FGD6-205ENST00000549499 CCDC146Q8IYE0 955 aa9.58□□□□□ -0.88
FGD6-205ENST00000549499 EIF2S2P20042 333 aaKnown RBP9.57□□□□□ -0.88
FGD6-205ENST00000549499 C1QTNF8P60827 252 aa9.57□□□□□ -0.88
FGD6-205ENST00000549499 FKBP8Q14318 412 aa9.57□□□□□ -0.88
FGD6-205ENST00000549499 TTC21AQ8NDW8 1320 aa9.57□□□□□ -0.88
FGD6-205ENST00000549499 GTF2E1P29083 439 aaPredicted RBP9.57□□□□□ -0.88
FGD6-205ENST00000549499 CCDC85AQ96PX6 553 aaPredicted RBP9.57□□□□□ -0.88
FGD6-205ENST00000549499 PAXIP1Q6ZW49 1069 aaPredicted RBP9.57□□□□□ -0.88
FGD6-205ENST00000549499 ARHGEF1Q92888 912 aaKnown RBP9.57□□□□□ -0.88
FGD6-205ENST00000549499 SLC4A9Q96Q91 983 aa9.57□□□□□ -0.88
FGD6-205ENST00000549499 A1BGP04217 495 aa9.56□□□□□ -0.88
FGD6-205ENST00000549499 MYL6BP14649 208 aa9.56□□□□□ -0.88
FGD6-205ENST00000549499 USPL1Q5W0Q7 1092 aa9.56□□□□□ -0.88
FGD6-205ENST00000549499 RTCBQ9Y3I0 505 aaKnown RBP9.56□□□□□ -0.88
FGD6-205ENST00000549499 CGNL1Q0VF96 1302 aa9.56□□□□□ -0.88
FGD6-205ENST00000549499 TRAPPC3LQ5T215 181 aa9.56□□□□□ -0.88
FGD6-205ENST00000549499 JARID2Q92833 1246 aaPredicted RBP9.56□□□□□ -0.88
FGD6-205ENST00000549499 VCANP13611 3396 aa9.56□□□□□ -0.88
FGD6-205ENST00000549499 IGSF1Q8N6C5 1336 aa9.56□□□□□ -0.88
FGD6-205ENST00000549499 GPTP24298 496 aa9.55□□□□□ -0.88
FGD6-205ENST00000549499 AIMP1Q12904 312 aaKnown RBP9.55□□□□□ -0.88
FGD6-205ENST00000549499 SPG7Q9UQ90 795 aa9.55□□□□□ -0.88
FGD6-205ENST00000549499 MEGF6O75095 1541 aa9.55□□□□□ -0.88
FGD6-205ENST00000549499 ATG3Q9NT62 314 aa9.55□□□□□ -0.88
FGD6-205ENST00000549499 SCAF8Q9UPN6 1271 aaKnown RBP9.55□□□□□ -0.88
FGD6-205ENST00000549499 RGPD5Q99666 1765 aa9.55□□□□□ -0.88
FGD6-205ENST00000549499 DPEP1P16444 411 aa9.55□□□□□ -0.88
FGD6-205ENST00000549499 RASSF7Q02833 373 aa9.54□□□□□ -0.88
FGD6-205ENST00000549499 IFNL2Q8IZJ0 200 aa9.54□□□□□ -0.88
FGD6-205ENST00000549499 PLCH1Q4KWH8 1693 aa9.54□□□□□ -0.88
FGD6-205ENST00000549499 TEFQ10587 303 aa9.53□□□□□ -0.88
FGD6-205ENST00000549499 IFT172Q9UG01 1749 aa9.53□□□□□ -0.88
FGD6-205ENST00000549499 DLC1Q96QB1 1528 aa9.53□□□□□ -0.88
FGD6-205ENST00000549499 PHACTR3Q96KR7 559 aa9.53□□□□□ -0.88
FGD6-205ENST00000549499 ZBTB1Q9Y2K1 713 aa9.53□□□□□ -0.88
FGD6-205ENST00000549499 ZPR1O75312 459 aa9.53□□□□□ -0.88
FGD6-205ENST00000549499 RNF181Q9P0P0 153 aa9.52□□□□□ -0.88
FGD6-205ENST00000549499 SZT2Q5T011 3432 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms