RNA–Protein interactions for RNA: ENST00000549400.1

PTPRB-207, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 4

Gene PTPRB, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-207ENST00000549400 RTL5Q5HYW3 569 aaPredicted RBP5.14□□□□□ -1.59
PTPRB-207ENST00000549400 PLCD4Q9BRC7 762 aa5.14□□□□□ -1.59
PTPRB-207ENST00000549400 CDHR5Q9HBB8 845 aa5.14□□□□□ -1.59
PTPRB-207ENST00000549400 DACH1Q9UI36 760 aa5.14□□□□□ -1.59
PTPRB-207ENST00000549400 MROH1Q8NDA8 1641 aa5.14□□□□□ -1.59
PTPRB-207ENST00000549400 WASHC2AQ641Q2 1341 aa5.14□□□□□ -1.59
PTPRB-207ENST00000549400 TRPM2O94759 1503 aa5.13□□□□□ -1.59
PTPRB-207ENST00000549400 TRPM1Q7Z4N2 1603 aa5.13□□□□□ -1.59
PTPRB-207ENST00000549400 E9PCH4 1651 aa5.13□□□□□ -1.59
PTPRB-207ENST00000549400 PPM1GO15355 546 aaPredicted RBP5.13□□□□□ -1.59
PTPRB-207ENST00000549400 KDM4AO75164 1064 aa5.13□□□□□ -1.59
PTPRB-207ENST00000549400 CANXP27824 592 aaKnown RBP5.13□□□□□ -1.59
PTPRB-207ENST00000549400 PRIM1P49642 420 aaKnown RBP5.13□□□□□ -1.59
PTPRB-207ENST00000549400 CNGB1Q14028 1251 aaPredicted RBP5.13□□□□□ -1.59
PTPRB-207ENST00000549400 NBPF8Q3BBV2 869 aa5.13□□□□□ -1.59
PTPRB-207ENST00000549400 GMPR2Q9P2T1 348 aaKnown RBP5.13□□□□□ -1.59
PTPRB-207ENST00000549400 ARIH1Q9Y4X5 557 aaPredicted RBP5.13□□□□□ -1.59
PTPRB-207ENST00000549400 NUP155O75694 1391 aa5.13□□□□□ -1.59
PTPRB-207ENST00000549400 CCDC7Q96M83 1385 aa5.13□□□□□ -1.59
PTPRB-207ENST00000549400 TRAPPC8Q9Y2L5 1435 aa5.13□□□□□ -1.59
PTPRB-207ENST00000549400 CFAP74Q9C0B2 1584 aa5.12□□□□□ -1.59
PTPRB-207ENST00000549400 TET3O43151 1660 aa5.12□□□□□ -1.59
PTPRB-207ENST00000549400 LOC102724159A0A0B4J2E5 919 aa5.12□□□□□ -1.59
PTPRB-207ENST00000549400 AXIN1O15169 862 aa5.12□□□□□ -1.59
PTPRB-207ENST00000549400 TSPY4P0CV99 314 aa5.12□□□□□ -1.59
PTPRB-207ENST00000549400 TSPY10P0CW01 314 aa5.12□□□□□ -1.59
PTPRB-207ENST00000549400 EIF4G2P78344 907 aaKnown RBP eCLIP5.12□□□□□ -1.59
PTPRB-207ENST00000549400 PWP2Q15269 919 aaKnown RBP5.12□□□□□ -1.59
PTPRB-207ENST00000549400 E2F4Q16254 413 aa5.12□□□□□ -1.59
PTPRB-207ENST00000549400 PADI6Q6TGC4 694 aa5.12□□□□□ -1.59
PTPRB-207ENST00000549400 CCDC82Q8N4S0 544 aa5.12□□□□□ -1.59
PTPRB-207ENST00000549400 GZF1Q9H116 711 aaPredicted RBP5.12□□□□□ -1.59
PTPRB-207ENST00000549400 KCNG1Q9UIX4 513 aa5.12□□□□□ -1.59
PTPRB-207ENST00000549400 PRAG1Q86YV5 1406 aa5.12□□□□□ -1.59
PTPRB-207ENST00000549400 ATP7AQ04656 1500 aa5.12□□□□□ -1.59
PTPRB-207ENST00000549400 WIPF1O43516 503 aa5.11□□□□□ -1.59
PTPRB-207ENST00000549400 PTMAP06454 111 aaKnown RBP5.11□□□□□ -1.59
PTPRB-207ENST00000549400 NEFMP07197 916 aa5.11□□□□□ -1.59
PTPRB-207ENST00000549400 HSPA5P11021 654 aaKnown RBP5.11□□□□□ -1.59
PTPRB-207ENST00000549400 NFX1Q12986 1120 aaKnown RBP5.11□□□□□ -1.59
PTPRB-207ENST00000549400 EFCAB2Q5VUJ9 269 aa5.11□□□□□ -1.59
PTPRB-207ENST00000549400 FAM43BQ6ZT52 329 aaPredicted RBP5.11□□□□□ -1.59
PTPRB-207ENST00000549400 AEBP1Q8IUX7 1158 aa5.11□□□□□ -1.59
PTPRB-207ENST00000549400 IL27Q8NEV9 243 aa5.11□□□□□ -1.59
PTPRB-207ENST00000549400 SECISBP2LQ93073 1101 aaKnown RBP5.11□□□□□ -1.59
PTPRB-207ENST00000549400 TRIM52Q96A61 297 aa5.11□□□□□ -1.59
PTPRB-207ENST00000549400 DHX29Q7Z478 1369 aaKnown RBP5.11□□□□□ -1.59
PTPRB-207ENST00000549400 FANCAO15360 1455 aa5.11□□□□□ -1.59
PTPRB-207ENST00000549400 A2MP01023 1474 aa5.11□□□□□ -1.59
PTPRB-207ENST00000549400 MLH3Q9UHC1 1453 aa5.11□□□□□ -1.59
PTPRB-207ENST00000549400 ROCK2O75116 1388 aaKnown RBP5.1□□□□□ -1.59
PTPRB-207ENST00000549400 CEP152O94986 1710 aa5.1□□□□□ -1.59
PTPRB-207ENST00000549400 GLI2P10070 1586 aa5.1□□□□□ -1.59
PTPRB-207ENST00000549400 HNRNPMP52272 730 aaKnown RBP eCLIP5.1□□□□□ -1.59
PTPRB-207ENST00000549400 HSP90AA2PQ14568 343 aaPredicted RBP5.1□□□□□ -1.59
PTPRB-207ENST00000549400 KMT5BQ4FZB7 885 aa5.1□□□□□ -1.59
PTPRB-207ENST00000549400 FRMPD1Q5SYB0 1578 aa5.1□□□□□ -1.59
PTPRB-207ENST00000549400 EFCAB6Q5THR3 1501 aa5.1□□□□□ -1.59
PTPRB-207ENST00000549400 BARGINQ6ZT62 677 aa5.1□□□□□ -1.59
PTPRB-207ENST00000549400 ASXL2Q76L83 1435 aa5.1□□□□□ -1.59
PTPRB-207ENST00000549400 SLC6A16Q9GZN6 736 aa5.1□□□□□ -1.59
PTPRB-207ENST00000549400 SLC24A3Q9HC58 644 aa5.1□□□□□ -1.59
PTPRB-207ENST00000549400 WDR70Q9NW82 654 aa5.1□□□□□ -1.59
PTPRB-207ENST00000549400 KIDINS220Q9ULH0 1771 aa5.1□□□□□ -1.59
PTPRB-207ENST00000549400 KIAA1210Q9ULL0 1709 aa5.1□□□□□ -1.59
PTPRB-207ENST00000549400 SPHKAPQ2M3C7 1700 aa5.09□□□□□ -1.59
PTPRB-207ENST00000549400 MADDQ8WXG6 1647 aa5.09□□□□□ -1.59
PTPRB-207ENST00000549400 ZMYM4Q5VZL5 1548 aa5.09□□□□□ -1.59
PTPRB-207ENST00000549400 ZNF518AQ6AHZ1 1483 aa5.09□□□□□ -1.59
PTPRB-207ENST00000549400 NEO1Q92859 1461 aa5.09□□□□□ -1.59
PTPRB-207ENST00000549400 NRXN1Q9ULB1 1477 aa5.09□□□□□ -1.59
PTPRB-207ENST00000549400 CCDC144AA2RUR9 1427 aa5.09□□□□□ -1.59
PTPRB-207ENST00000549400 POGZQ7Z3K3 1410 aa5.09□□□□□ -1.59
PTPRB-207ENST00000549400 USP47Q96K76 1375 aa5.09□□□□□ -1.59
PTPRB-207ENST00000549400 ADH1BP00325 375 aa5.09□□□□□ -1.59
PTPRB-207ENST00000549400 OSBPP22059 807 aa5.09□□□□□ -1.59
PTPRB-207ENST00000549400 MCCP23508 829 aa5.09□□□□□ -1.59
PTPRB-207ENST00000549400 ANAPC15P60006 121 aa5.09□□□□□ -1.59
PTPRB-207ENST00000549400 CALD1Q05682 793 aaKnown RBP5.09□□□□□ -1.59
PTPRB-207ENST00000549400 DDX10Q13206 875 aaKnown RBP5.09□□□□□ -1.59
PTPRB-207ENST00000549400 CYP4X1Q8N118 509 aa5.09□□□□□ -1.59
PTPRB-207ENST00000549400 CRIPAKQ8N1N5 446 aa5.09□□□□□ -1.59
PTPRB-207ENST00000549400 ZC3H15Q8WU90 426 aaKnown RBP5.09□□□□□ -1.59
PTPRB-207ENST00000549400 CHMP4BQ9H444 224 aaKnown RBP5.09□□□□□ -1.59
PTPRB-207ENST00000549400 PKD2L1Q9P0L9 805 aa5.09□□□□□ -1.59
PTPRB-207ENST00000549400 RIPOR2Q9Y4F9 1068 aa5.09□□□□□ -1.59
PTPRB-207ENST00000549400 ADGRL1O94910 1474 aa5.08□□□□□ -1.6
PTPRB-207ENST00000549400 MYOM2P54296 1465 aa5.08□□□□□ -1.6
PTPRB-207ENST00000549400 COL17A1Q9UMD9 1497 aaPredicted RBP5.08□□□□□ -1.6
PTPRB-207ENST00000549400 SCAPERQ9BY12 1400 aa5.08□□□□□ -1.6
PTPRB-207ENST00000549400 KTN1Q86UP2 1357 aaKnown RBP5.08□□□□□ -1.6
PTPRB-207ENST00000549400 KIF7Q2M1P5 1343 aa5.08□□□□□ -1.6
PTPRB-207ENST00000549400 FAM181BA6NEQ2 426 aa5.08□□□□□ -1.6
PTPRB-207ENST00000549400 CLGNO14967 610 aa5.08□□□□□ -1.6
PTPRB-207ENST00000549400 IRF5Q13568 498 aa5.08□□□□□ -1.6
PTPRB-207ENST00000549400 PLA2G2CQ5R387 149 aa5.08□□□□□ -1.6
PTPRB-207ENST00000549400 EXOC8Q8IYI6 725 aa5.08□□□□□ -1.6
PTPRB-207ENST00000549400 TTC13Q8NBP0 860 aa5.08□□□□□ -1.6
PTPRB-207ENST00000549400 ZNF526Q8TF50 670 aaPredicted RBP5.08□□□□□ -1.6
PTPRB-207ENST00000549400 EYA1Q99502 592 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms