RNA–Protein interactions for RNA: ENST00000549395.1

LETMD1-219, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 475 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-219ENST00000549395 CCNL1Q9UK58 526 aaPredicted RBP11.04□□□□□ -0.64
LETMD1-219ENST00000549395 ERBB3P21860 1342 aa11.04□□□□□ -0.64
LETMD1-219ENST00000549395 TTC21BQ7Z4L5 1316 aa11.04□□□□□ -0.64
LETMD1-219ENST00000549395 LTN1O94822 1766 aa11.03□□□□□ -0.64
LETMD1-219ENST00000549395 STAC3Q96MF2 364 aa11.03□□□□□ -0.64
LETMD1-219ENST00000549395 C5P01031 1676 aa11.02□□□□□ -0.64
LETMD1-219ENST00000549395 NSD2O96028 1365 aa11.02□□□□□ -0.65
LETMD1-219ENST00000549395 ANKRD36BQ8N2N9 1353 aa11.02□□□□□ -0.65
LETMD1-219ENST00000549395 CICQ96RK0 1608 aaPredicted RBP11.02□□□□□ -0.65
LETMD1-219ENST00000549395 KIAA1210Q9ULL0 1709 aa11.01□□□□□ -0.65
LETMD1-219ENST00000549395 RBM46Q8TBY0 533 aaKnown RBP11.01□□□□□ -0.65
LETMD1-219ENST00000549395 ANKRD24Q8TF21 1146 aa11.01□□□□□ -0.65
LETMD1-219ENST00000549395 CENPJQ9HC77 1338 aaPredicted RBP11.01□□□□□ -0.65
LETMD1-219ENST00000549395 USP54Q70EL1 1684 aa11.01□□□□□ -0.65
LETMD1-219ENST00000549395 TAF1LQ8IZX4 1826 aa11□□□□□ -0.65
LETMD1-219ENST00000549395 NBPF1Q3BBV0 1214 aa11□□□□□ -0.65
LETMD1-219ENST00000549395 C16orf71Q8IYS4 520 aaPredicted RBP10.99□□□□□ -0.65
LETMD1-219ENST00000549395 ZNF692Q9BU19 519 aaPredicted RBP10.99□□□□□ -0.65
LETMD1-219ENST00000549395 TTC21AQ8NDW8 1320 aa10.99□□□□□ -0.65
LETMD1-219ENST00000549395 FLAD1Q8NFF5 587 aa10.98□□□□□ -0.65
LETMD1-219ENST00000549395 USP47Q96K76 1375 aa10.98□□□□□ -0.65
LETMD1-219ENST00000549395 N4BP2Q86UW6 1770 aaPredicted RBP10.98□□□□□ -0.65
LETMD1-219ENST00000549395 HSPA1AP0DMV8 641 aaKnown RBP10.97□□□□□ -0.65
LETMD1-219ENST00000549395 HSPA1BP0DMV9 641 aaKnown RBP10.97□□□□□ -0.65
LETMD1-219ENST00000549395 FSTL1Q12841 308 aa10.97□□□□□ -0.65
LETMD1-219ENST00000549395 TOGARAM1Q9Y4F4 1720 aa10.96□□□□□ -0.65
LETMD1-219ENST00000549395 SMIM5Q71RC9 77 aa10.96□□□□□ -0.65
LETMD1-219ENST00000549395 UBR3Q6ZT12 1888 aa10.95□□□□□ -0.66
LETMD1-219ENST00000549395 C4BP0C0L5 1744 aa10.95□□□□□ -0.66
LETMD1-219ENST00000549395 KIAA1551Q9HCM1 1747 aa10.95□□□□□ -0.66
LETMD1-219ENST00000549395 KTN1Q86UP2 1357 aaKnown RBP10.95□□□□□ -0.66
LETMD1-219ENST00000549395 ARHGAP27Q6ZUM4 889 aa10.95□□□□□ -0.66
LETMD1-219ENST00000549395 AMIGO3Q86WK7 504 aa10.95□□□□□ -0.66
LETMD1-219ENST00000549395 RGPD2P0DJD1 1756 aa10.95□□□□□ -0.66
LETMD1-219ENST00000549395 MON2Q7Z3U7 1717 aa10.95□□□□□ -0.66
LETMD1-219ENST00000549395 FAM208AQ9UK61 1670 aaKnown RBP10.95□□□□□ -0.66
LETMD1-219ENST00000549395 KIF13BQ9NQT8 1826 aa10.94□□□□□ -0.66
LETMD1-219ENST00000549395 PHF14O94880 888 aa10.94□□□□□ -0.66
LETMD1-219ENST00000549395 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.94□□□□□ -0.66
LETMD1-219ENST00000549395 LTV1Q96GA3 475 aaPredicted RBP10.94□□□□□ -0.66
LETMD1-219ENST00000549395 BCS1LQ9Y276 419 aa10.94□□□□□ -0.66
LETMD1-219ENST00000549395 PXDNLA1KZ92 1463 aa10.93□□□□□ -0.66
LETMD1-219ENST00000549395 USP31Q70CQ4 1352 aa10.93□□□□□ -0.66
LETMD1-219ENST00000549395 PKD1L3Q7Z443 1732 aa10.93□□□□□ -0.66
LETMD1-219ENST00000549395 EVC2Q86UK5 1308 aa10.93□□□□□ -0.66
LETMD1-219ENST00000549395 ZCRB1Q8TBF4 217 aaKnown RBP10.93□□□□□ -0.66
LETMD1-219ENST00000549395 AK7Q96M32 723 aa10.93□□□□□ -0.66
LETMD1-219ENST00000549395 KCPQ6ZWJ8 1503 aa10.93□□□□□ -0.66
LETMD1-219ENST00000549395 NME9Q86XW9 330 aa10.92□□□□□ -0.66
LETMD1-219ENST00000549395 RRAGCQ9HB90 399 aa10.92□□□□□ -0.66
LETMD1-219ENST00000549395 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.91□□□□□ -0.66
LETMD1-219ENST00000549395 A0A0G2JLW4 131 aa10.91□□□□□ -0.66
LETMD1-219ENST00000549395 C9orf131Q5VYM1 1079 aa10.91□□□□□ -0.66
LETMD1-219ENST00000549395 PCDH10Q9P2E7 1040 aa10.91□□□□□ -0.66
LETMD1-219ENST00000549395 TNRC6CQ9HCJ0 1690 aaKnown RBP10.91□□□□□ -0.66
LETMD1-219ENST00000549395 BRCA1P38398 1863 aaKnown RBP10.91□□□□□ -0.66
LETMD1-219ENST00000549395 PALLDQ8WX93 1383 aa10.9□□□□□ -0.66
LETMD1-219ENST00000549395 RAB3GAP2Q9H2M9 1393 aa10.9□□□□□ -0.66
LETMD1-219ENST00000549395 KDM2BQ8NHM5 1336 aa10.9□□□□□ -0.66
LETMD1-219ENST00000549395 MEGF6O75095 1541 aa10.9□□□□□ -0.66
LETMD1-219ENST00000549395 PLEKHG2Q9H7P9 1386 aa10.9□□□□□ -0.67
LETMD1-219ENST00000549395 ARFGEF1Q9Y6D6 1849 aa10.89□□□□□ -0.67
LETMD1-219ENST00000549395 FCHSD2O94868 740 aa10.89□□□□□ -0.67
LETMD1-219ENST00000549395 HMGB2P26583 209 aaKnown RBP10.89□□□□□ -0.67
LETMD1-219ENST00000549395 TGFB2P61812 414 aa10.89□□□□□ -0.67
LETMD1-219ENST00000549395 SMC1BQ8NDV3 1235 aa10.89□□□□□ -0.67
LETMD1-219ENST00000549395 IP6K1Q92551 441 aa10.89□□□□□ -0.67
LETMD1-219ENST00000549395 ITGB4P16144 1822 aa10.88□□□□□ -0.67
LETMD1-219ENST00000549395 MMP10P09238 476 aa10.88□□□□□ -0.67
LETMD1-219ENST00000549395 MPRIPQ6WCQ1 1025 aa10.88□□□□□ -0.67
LETMD1-219ENST00000549395 C10orf71Q711Q0 1435 aa10.88□□□□□ -0.67
LETMD1-219ENST00000549395 SBF1O95248 1867 aa10.87□□□□□ -0.67
LETMD1-219ENST00000549395 NSD3Q9BZ95 1437 aa10.87□□□□□ -0.67
LETMD1-219ENST00000549395 DPEP1P16444 411 aa10.87□□□□□ -0.67
LETMD1-219ENST00000549395 SSFA2P28290 1259 aa10.87□□□□□ -0.67
LETMD1-219ENST00000549395 SBNO2Q9Y2G9 1366 aa10.87□□□□□ -0.67
LETMD1-219ENST00000549395 RNF181Q9P0P0 153 aa10.86□□□□□ -0.67
LETMD1-219ENST00000549395 FAM161AQ3B820 660 aa10.85□□□□□ -0.67
LETMD1-219ENST00000549395 LINC00116Q8NCU8 138 aa10.85□□□□□ -0.67
LETMD1-219ENST00000549395 MAP2P11137 1827 aaKnown RBP10.85□□□□□ -0.67
LETMD1-219ENST00000549395 CD163L1Q9NR16 1453 aa10.85□□□□□ -0.67
LETMD1-219ENST00000549395 HOXC9P31274 260 aa10.84□□□□□ -0.67
LETMD1-219ENST00000549395 USHBP1Q8N6Y0 703 aa10.84□□□□□ -0.67
LETMD1-219ENST00000549395 SMARCC1Q92922 1105 aaPredicted RBP10.84□□□□□ -0.67
LETMD1-219ENST00000549395 GNPATO15228 680 aa10.83□□□□□ -0.68
LETMD1-219ENST00000549395 FOXN1O15353 648 aa10.83□□□□□ -0.68
LETMD1-219ENST00000549395 KCNA3P22001 575 aa10.83□□□□□ -0.68
LETMD1-219ENST00000549395 C4AP0C0L4 1744 aa10.83□□□□□ -0.68
LETMD1-219ENST00000549395 FBLN1P23142 703 aa10.82□□□□□ -0.68
LETMD1-219ENST00000549395 AMPHP49418 695 aa10.82□□□□□ -0.68
LETMD1-219ENST00000549395 NBPF6Q5VWK0 638 aa10.82□□□□□ -0.68
LETMD1-219ENST00000549395 RAPGEF4Q8WZA2 1011 aa10.82□□□□□ -0.68
LETMD1-219ENST00000549395 NBPF4Q96M43 638 aa10.82□□□□□ -0.68
LETMD1-219ENST00000549395 CCDC87Q9NVE4 849 aa10.82□□□□□ -0.68
LETMD1-219ENST00000549395 MAP3K19Q56UN5 1328 aa10.82□□□□□ -0.68
LETMD1-219ENST00000549395 LOC102724428A0A0B4J2F2 783 aa10.81□□□□□ -0.68
LETMD1-219ENST00000549395 SIK1P57059 783 aa10.81□□□□□ -0.68
LETMD1-219ENST00000549395 ITPK1Q13572 414 aa10.81□□□□□ -0.68
LETMD1-219ENST00000549395 HDGFL2Q7Z4V5 671 aaPredicted RBP10.81□□□□□ -0.68
LETMD1-219ENST00000549395 TMC1Q8TDI8 760 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms