RNA–Protein interactions for RNA: ENST00000549366.5

PFKM-216, Transcript of phosphofructokinase, muscle, humanhuman

TSL 4

Gene PFKM, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-216ENST00000549366 COL3A1P02461 1466 aaPredicted RBP10.48□□□□□ -0.73
PFKM-216ENST00000549366 EXOC5O00471 708 aa10.47□□□□□ -0.73
PFKM-216ENST00000549366 TATP17735 454 aaPredicted RBP10.47□□□□□ -0.73
PFKM-216ENST00000549366 NBPF6Q5VWK0 638 aa10.47□□□□□ -0.73
PFKM-216ENST00000549366 FAM196AQ6ZSG2 479 aa10.47□□□□□ -0.73
PFKM-216ENST00000549366 CCDC125Q86Z20 511 aa10.47□□□□□ -0.73
PFKM-216ENST00000549366 NBPF4Q96M43 638 aa10.47□□□□□ -0.73
PFKM-216ENST00000549366 MTHFSP49914 203 aa10.46□□□□□ -0.73
PFKM-216ENST00000549366 USHBP1Q8N6Y0 703 aa10.46□□□□□ -0.73
PFKM-216ENST00000549366 UPF1Q92900 1129 aaKnown RBP eCLIP10.46□□□□□ -0.73
PFKM-216ENST00000549366 PCDH11XQ9BZA7 1347 aa10.46□□□□□ -0.73
PFKM-216ENST00000549366 PCDH11YQ9BZA8 1340 aa10.46□□□□□ -0.73
PFKM-216ENST00000549366 RALBP1Q15311 655 aa10.45□□□□□ -0.74
PFKM-216ENST00000549366 EYA1Q99502 592 aa10.45□□□□□ -0.74
PFKM-216ENST00000549366 KDRP35968 1356 aa10.44□□□□□ -0.74
PFKM-216ENST00000549366 DIAPH1O60610 1272 aaKnown RBP10.44□□□□□ -0.74
PFKM-216ENST00000549366 PPP2R1AP30153 589 aa10.44□□□□□ -0.74
PFKM-216ENST00000549366 BTAF1O14981 1849 aa10.44□□□□□ -0.74
PFKM-216ENST00000549366 VIRMAQ69YN4 1812 aaKnown RBP10.44□□□□□ -0.74
PFKM-216ENST00000549366 RREB1Q92766 1687 aa10.44□□□□□ -0.74
PFKM-216ENST00000549366 MYBBP1AQ9BQG0 1328 aaKnown RBP10.43□□□□□ -0.74
PFKM-216ENST00000549366 BAG6P46379 1132 aa10.43□□□□□ -0.74
PFKM-216ENST00000549366 FAM182BQ5T319 152 aa10.43□□□□□ -0.74
PFKM-216ENST00000549366 SPG7Q9UQ90 795 aa10.43□□□□□ -0.74
PFKM-216ENST00000549366 TOGARAM1Q9Y4F4 1720 aa10.43□□□□□ -0.74
PFKM-216ENST00000549366 IL13P35225 146 aa10.42□□□□□ -0.74
PFKM-216ENST00000549366 MARCH10Q8NA82 808 aaPredicted RBP10.42□□□□□ -0.74
PFKM-216ENST00000549366 ZCRB1Q8TBF4 217 aaKnown RBP10.42□□□□□ -0.74
PFKM-216ENST00000549366 NUDCQ9Y266 331 aa10.42□□□□□ -0.74
PFKM-216ENST00000549366 NUP188Q5SRE5 1749 aa10.41□□□□□ -0.74
PFKM-216ENST00000549366 SULT6B1Q6IMI4 303 aa10.41□□□□□ -0.74
PFKM-216ENST00000549366 RNF39Q9H2S5 420 aa10.41□□□□□ -0.74
PFKM-216ENST00000549366 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.41□□□□□ -0.74
PFKM-216ENST00000549366 ITGB4P16144 1822 aa10.41□□□□□ -0.74
PFKM-216ENST00000549366 U2SURPO15042 1029 aaKnown RBP10.4□□□□□ -0.74
PFKM-216ENST00000549366 TRIM37O94972 964 aa10.4□□□□□ -0.74
PFKM-216ENST00000549366 AMOTQ4VCS5 1084 aa10.4□□□□□ -0.74
PFKM-216ENST00000549366 DDX54Q8TDD1 881 aaKnown RBP10.4□□□□□ -0.74
PFKM-216ENST00000549366 SCN11AQ9UI33 1791 aa10.39□□□□□ -0.75
PFKM-216ENST00000549366 LY75O60449 1722 aa10.38□□□□□ -0.75
PFKM-216ENST00000549366 KAT6BQ8WYB5 2073 aa10.38□□□□□ -0.75
PFKM-216ENST00000549366 PLEKHO1Q53GL0 409 aaPredicted RBP10.38□□□□□ -0.75
PFKM-216ENST00000549366 C1orf141Q5JVX7 400 aa10.38□□□□□ -0.75
PFKM-216ENST00000549366 IFNL2Q8IZJ0 200 aa10.38□□□□□ -0.75
PFKM-216ENST00000549366 BCL11BQ9C0K0 894 aaPredicted RBP10.38□□□□□ -0.75
PFKM-216ENST00000549366 PRKRIP1Q9H875 184 aaPredicted RBP10.38□□□□□ -0.75
PFKM-216ENST00000549366 APBA3O96018 575 aa10.37□□□□□ -0.75
PFKM-216ENST00000549366 NEFMP07197 916 aa10.37□□□□□ -0.75
PFKM-216ENST00000549366 HSP90AB1P08238 724 aaKnown RBP10.37□□□□□ -0.75
PFKM-216ENST00000549366 HMOX1P09601 288 aa10.37□□□□□ -0.75
PFKM-216ENST00000549366 ZNF530Q6P9A1 599 aaPredicted RBP10.37□□□□□ -0.75
PFKM-216ENST00000549366 AEBP1Q8IUX7 1158 aa10.37□□□□□ -0.75
PFKM-216ENST00000549366 ADAMTS7Q9UKP4 1686 aa10.37□□□□□ -0.75
PFKM-216ENST00000549366 CYP27B1O15528 508 aa10.36□□□□□ -0.75
PFKM-216ENST00000549366 ANP32CO43423 234 aa10.36□□□□□ -0.75
PFKM-216ENST00000549366 U2AF1L5P0DN76 240 aaPredicted RBP10.36□□□□□ -0.75
PFKM-216ENST00000549366 PHKG2P15735 406 aa10.36□□□□□ -0.75
PFKM-216ENST00000549366 U2AF1Q01081 240 aaKnown RBP eCLIP10.36□□□□□ -0.75
PFKM-216ENST00000549366 ACSBG1Q96GR2 724 aa10.36□□□□□ -0.75
PFKM-216ENST00000549366 MRC1P22897 1456 aa10.36□□□□□ -0.75
PFKM-216ENST00000549366 DEFB132Q7Z7B7 95 aa10.35□□□□□ -0.75
PFKM-216ENST00000549366 GAS2L2Q8NHY3 880 aa10.35□□□□□ -0.75
PFKM-216ENST00000549366 SYTL4Q96C24 671 aaPredicted RBP10.35□□□□□ -0.75
PFKM-216ENST00000549366 PNNQ9H307 717 aaKnown RBP10.35□□□□□ -0.75
PFKM-216ENST00000549366 PAPPAQ13219 1627 aa10.34□□□□□ -0.75
PFKM-216ENST00000549366 PLSCR1O15162 318 aa10.34□□□□□ -0.75
PFKM-216ENST00000549366 NKX1-1Q15270 411 aaPredicted RBP10.34□□□□□ -0.75
PFKM-216ENST00000549366 AKAP4Q5JQC9 854 aa10.34□□□□□ -0.75
PFKM-216ENST00000549366 RSPH6AQ9H0K4 717 aa10.34□□□□□ -0.75
PFKM-216ENST00000549366 DLG5Q8TDM6 1919 aa10.34□□□□□ -0.75
PFKM-216ENST00000549366 C5P01031 1676 aa10.34□□□□□ -0.75
PFKM-216ENST00000549366 KDM6AO15550 1401 aaPredicted RBP10.33□□□□□ -0.76
PFKM-216ENST00000549366 PRKAR2BP31323 418 aa10.33□□□□□ -0.76
PFKM-216ENST00000549366 EN1Q05925 392 aaPredicted RBP10.33□□□□□ -0.76
PFKM-216ENST00000549366 WDR43Q15061 677 aaKnown RBP eCLIP10.33□□□□□ -0.76
PFKM-216ENST00000549366 DCAF5Q96JK2 942 aa10.33□□□□□ -0.76
PFKM-216ENST00000549366 MAP3K5Q99683 1374 aa10.33□□□□□ -0.76
PFKM-216ENST00000549366 ZNF831Q5JPB2 1677 aa10.33□□□□□ -0.76
PFKM-216ENST00000549366 SIPA1L3O60292 1781 aaPredicted RBP10.33□□□□□ -0.76
PFKM-216ENST00000549366 TAF1LQ8IZX4 1826 aa10.33□□□□□ -0.76
PFKM-216ENST00000549366 QSER1Q2KHR3 1735 aa10.33□□□□□ -0.76
PFKM-216ENST00000549366 MAPK8IP3Q9UPT6 1336 aa10.33□□□□□ -0.76
PFKM-216ENST00000549366 KCNQ2O43526 872 aa10.32□□□□□ -0.76
PFKM-216ENST00000549366 FCHSD2O94868 740 aa10.32□□□□□ -0.76
PFKM-216ENST00000549366 HOXD11P31277 338 aaPredicted RBP10.32□□□□□ -0.76
PFKM-216ENST00000549366 EZH2Q15910 746 aaKnown RBP10.32□□□□□ -0.76
PFKM-216ENST00000549366 TMOD3Q9NYL9 352 aa10.32□□□□□ -0.76
PFKM-216ENST00000549366 CICQ96RK0 1608 aaPredicted RBP10.32□□□□□ -0.76
PFKM-216ENST00000549366 HMGB2P26583 209 aaKnown RBP10.31□□□□□ -0.76
PFKM-216ENST00000549366 PRIM1P49642 420 aaKnown RBP10.31□□□□□ -0.76
PFKM-216ENST00000549366 CAMKK2Q96RR4 588 aa10.31□□□□□ -0.76
PFKM-216ENST00000549366 PALLDQ8WX93 1383 aa10.3□□□□□ -0.76
PFKM-216ENST00000549366 UBR2Q8IWV8 1755 aa10.3□□□□□ -0.76
PFKM-216ENST00000549366 ERVV-2B6SEH9 535 aa10.3□□□□□ -0.76
PFKM-216ENST00000549366 MTHFSDQ2M296 383 aaKnown RBP10.3□□□□□ -0.76
PFKM-216ENST00000549366 MPRIPQ6WCQ1 1025 aa10.3□□□□□ -0.76
PFKM-216ENST00000549366 SMARCC1Q92922 1105 aaPredicted RBP10.3□□□□□ -0.76
PFKM-216ENST00000549366 TUBGCP6Q96RT7 1819 aa10.29□□□□□ -0.76
PFKM-216ENST00000549366 GNAT3A8MTJ3 354 aa10.29□□□□□ -0.76
PFKM-216ENST00000549366 SLC27A3Q5K4L6 730 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms