RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 COL24A1Q17RW2 1714 aa15.47■□□□□ 0.07
TRAFD1-206ENST00000549358 COL23A1Q86Y22 540 aaPredicted RBP15.47■□□□□ 0.07
TRAFD1-206ENST00000549358 L3MBTL2Q969R5 705 aa15.47■□□□□ 0.07
TRAFD1-206ENST00000549358 LTV1Q96GA3 475 aaPredicted RBP15.47■□□□□ 0.07
TRAFD1-206ENST00000549358 ZNF526Q8TF50 670 aaPredicted RBP15.46■□□□□ 0.07
TRAFD1-206ENST00000549358 CCNL1Q9UK58 526 aaPredicted RBP15.46■□□□□ 0.07
TRAFD1-206ENST00000549358 QSER1Q2KHR3 1735 aa15.46■□□□□ 0.06
TRAFD1-206ENST00000549358 HSPA6P17066 643 aa15.45■□□□□ 0.06
TRAFD1-206ENST00000549358 MSL1Q68DK7 614 aa15.45■□□□□ 0.06
TRAFD1-206ENST00000549358 TMC1Q8TDI8 760 aa15.45■□□□□ 0.06
TRAFD1-206ENST00000549358 ANKRD36BQ8N2N9 1353 aa15.45■□□□□ 0.06
TRAFD1-206ENST00000549358 SBNO2Q9Y2G9 1366 aa15.44■□□□□ 0.06
TRAFD1-206ENST00000549358 IP6K1Q92551 441 aa15.43■□□□□ 0.06
TRAFD1-206ENST00000549358 ROCK2O75116 1388 aaKnown RBP15.43■□□□□ 0.06
TRAFD1-206ENST00000549358 LTN1O94822 1766 aa15.42■□□□□ 0.06
TRAFD1-206ENST00000549358 NSD2O96028 1365 aa15.42■□□□□ 0.06
TRAFD1-206ENST00000549358 HDGFL2Q7Z4V5 671 aaPredicted RBP15.42■□□□□ 0.06
TRAFD1-206ENST00000549358 CD2APQ9Y5K6 639 aa15.42■□□□□ 0.06
TRAFD1-206ENST00000549358 TUBGCP6Q96RT7 1819 aa15.41■□□□□ 0.06
TRAFD1-206ENST00000549358 MON2Q7Z3U7 1717 aa15.41■□□□□ 0.06
TRAFD1-206ENST00000549358 ZCRB1Q8TBF4 217 aaKnown RBP15.41■□□□□ 0.06
TRAFD1-206ENST00000549358 SLC12A5Q9H2X9 1139 aa15.41■□□□□ 0.06
TRAFD1-206ENST00000549358 CD163L1Q9NR16 1453 aa15.4■□□□□ 0.06
TRAFD1-206ENST00000549358 USP47Q96K76 1375 aa15.4■□□□□ 0.06
TRAFD1-206ENST00000549358 KAT6BQ8WYB5 2073 aa15.39■□□□□ 0.05
TRAFD1-206ENST00000549358 USP54Q70EL1 1684 aa15.38■□□□□ 0.05
TRAFD1-206ENST00000549358 LY75O60449 1722 aa15.38■□□□□ 0.05
TRAFD1-206ENST00000549358 WWC3Q9ULE0 1092 aa15.38■□□□□ 0.05
TRAFD1-206ENST00000549358 ADCY9O60503 1353 aa15.37■□□□□ 0.05
TRAFD1-206ENST00000549358 SIN3AQ96ST3 1273 aa15.37■□□□□ 0.05
TRAFD1-206ENST00000549358 TERF2IPQ9NYB0 399 aa15.37■□□□□ 0.05
TRAFD1-206ENST00000549358 DOT1LQ8TEK3 1739 aa15.37■□□□□ 0.05
TRAFD1-206ENST00000549358 EDC4Q6P2E9 1401 aaKnown RBP15.36■□□□□ 0.05
TRAFD1-206ENST00000549358 FBLN1P23142 703 aa15.36■□□□□ 0.05
TRAFD1-206ENST00000549358 HOXC9P31274 260 aa15.35■□□□□ 0.05
TRAFD1-206ENST00000549358 AMPHP49418 695 aa15.35■□□□□ 0.05
TRAFD1-206ENST00000549358 NEUROD1Q13562 356 aa15.35■□□□□ 0.05
TRAFD1-206ENST00000549358 FLAD1Q8NFF5 587 aa15.35■□□□□ 0.05
TRAFD1-206ENST00000549358 U3KPZ7 1027 aaPredicted RBP15.35■□□□□ 0.05
TRAFD1-206ENST00000549358 MAP3K19Q56UN5 1328 aa15.35■□□□□ 0.05
TRAFD1-206ENST00000549358 A0A1W2PP64 1363 aa15.35■□□□□ 0.05
TRAFD1-206ENST00000549358 MEGF6O75095 1541 aa15.33■□□□□ 0.05
TRAFD1-206ENST00000549358 KIF3CO14782 793 aa15.33■□□□□ 0.04
TRAFD1-206ENST00000549358 IGSF1Q8N6C5 1336 aa15.33■□□□□ 0.04
TRAFD1-206ENST00000549358 FAM208AQ9UK61 1670 aaKnown RBP15.32■□□□□ 0.04
TRAFD1-206ENST00000549358 HMGB2P26583 209 aaKnown RBP15.32■□□□□ 0.04
TRAFD1-206ENST00000549358 NBPF6Q5VWK0 638 aa15.32■□□□□ 0.04
TRAFD1-206ENST00000549358 MPRIPQ6WCQ1 1025 aa15.32■□□□□ 0.04
TRAFD1-206ENST00000549358 USHBP1Q8N6Y0 703 aa15.32■□□□□ 0.04
TRAFD1-206ENST00000549358 COG3Q96JB2 828 aa15.32■□□□□ 0.04
TRAFD1-206ENST00000549358 NBPF4Q96M43 638 aa15.32■□□□□ 0.04
TRAFD1-206ENST00000549358 PHF14O94880 888 aa15.31■□□□□ 0.04
TRAFD1-206ENST00000549358 SMIM5Q71RC9 77 aa15.31■□□□□ 0.04
TRAFD1-206ENST00000549358 AMIGO3Q86WK7 504 aa15.31■□□□□ 0.04
TRAFD1-206ENST00000549358 RAPGEF4Q8WZA2 1011 aa15.31■□□□□ 0.04
TRAFD1-206ENST00000549358 CARD11Q9BXL7 1154 aa15.31■□□□□ 0.04
TRAFD1-206ENST00000549358 APLP1P51693 650 aa15.3■□□□□ 0.04
TRAFD1-206ENST00000549358 PALLDQ8WX93 1383 aa15.3■□□□□ 0.04
TRAFD1-206ENST00000549358 AK7Q96M32 723 aa15.3■□□□□ 0.04
TRAFD1-206ENST00000549358 C5P01031 1676 aa15.29■□□□□ 0.04
TRAFD1-206ENST00000549358 CGNL1Q0VF96 1302 aa15.29■□□□□ 0.04
TRAFD1-206ENST00000549358 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.28■□□□□ 0.04
TRAFD1-206ENST00000549358 TATP17735 454 aaPredicted RBP15.28■□□□□ 0.04
TRAFD1-206ENST00000549358 RRS1Q15050 365 aaKnown RBP15.28■□□□□ 0.04
TRAFD1-206ENST00000549358 DNAJC5GQ8N7S2 189 aa15.28■□□□□ 0.04
TRAFD1-206ENST00000549358 RGPD2P0DJD1 1756 aa15.26■□□□□ 0.03
TRAFD1-206ENST00000549358 PCDH11XQ9BZA7 1347 aa15.26■□□□□ 0.03
TRAFD1-206ENST00000549358 PCDH11YQ9BZA8 1340 aa15.26■□□□□ 0.03
TRAFD1-206ENST00000549358 TOMM70O94826 608 aa15.26■□□□□ 0.03
TRAFD1-206ENST00000549358 PUS7Q96PZ0 661 aaKnown RBP15.26■□□□□ 0.03
TRAFD1-206ENST00000549358 SMARCC1Q92922 1105 aaPredicted RBP15.25■□□□□ 0.03
TRAFD1-206ENST00000549358 C4BP0C0L5 1744 aa15.24■□□□□ 0.03
TRAFD1-206ENST00000549358 CYP27B1O15528 508 aa15.23■□□□□ 0.03
TRAFD1-206ENST00000549358 SSFA2P28290 1259 aa15.23■□□□□ 0.03
TRAFD1-206ENST00000549358 HSP90AB2PQ58FF8 381 aa15.23■□□□□ 0.03
TRAFD1-206ENST00000549358 PIGBQ92521 554 aa15.23■□□□□ 0.03
TRAFD1-206ENST00000549358 SMG6Q86US8 1419 aaKnown RBP15.23■□□□□ 0.03
TRAFD1-206ENST00000549358 RTL1A6NKG5 1358 aa15.23■□□□□ 0.03
TRAFD1-206ENST00000549358 LINC00116Q8NCU8 138 aa15.22■□□□□ 0.03
TRAFD1-206ENST00000549358 GGNBP2Q9H3C7 697 aa15.22■□□□□ 0.03
TRAFD1-206ENST00000549358 BCS1LQ9Y276 419 aa15.22■□□□□ 0.03
TRAFD1-206ENST00000549358 TAF1LQ8IZX4 1826 aa15.22■□□□□ 0.03
TRAFD1-206ENST00000549358 NSD3Q9BZ95 1437 aa15.21■□□□□ 0.03
TRAFD1-206ENST00000549358 ARHGAP27Q6ZUM4 889 aa15.21■□□□□ 0.03
TRAFD1-206ENST00000549358 NMRK2Q9NPI5 230 aa15.21■□□□□ 0.03
TRAFD1-206ENST00000549358 TOGARAM1Q9Y4F4 1720 aa15.2■□□□□ 0.02
TRAFD1-206ENST00000549358 LOC102724428A0A0B4J2F2 783 aa15.2■□□□□ 0.02
TRAFD1-206ENST00000549358 A0A0G2JLW4 131 aa15.2■□□□□ 0.02
TRAFD1-206ENST00000549358 FYB1O15117 783 aa15.2■□□□□ 0.02
TRAFD1-206ENST00000549358 GNPATO15228 680 aa15.2■□□□□ 0.02
TRAFD1-206ENST00000549358 SLC4A2P04920 1241 aa15.2■□□□□ 0.02
TRAFD1-206ENST00000549358 MMP10P09238 476 aa15.2■□□□□ 0.02
TRAFD1-206ENST00000549358 SIK1P57059 783 aa15.2■□□□□ 0.02
TRAFD1-206ENST00000549358 HTRA3P83110 453 aa15.19■□□□□ 0.02
TRAFD1-206ENST00000549358 COL13A1Q5TAT6 717 aaPredicted RBP15.19■□□□□ 0.02
TRAFD1-206ENST00000549358 CAPN15O75808 1086 aa15.18■□□□□ 0.02
TRAFD1-206ENST00000549358 ATP6V1AP38606 617 aa15.18■□□□□ 0.02
TRAFD1-206ENST00000549358 TGFB2P61812 414 aa15.18■□□□□ 0.02
TRAFD1-206ENST00000549358 ITPK1Q13572 414 aa15.18■□□□□ 0.02
TRAFD1-206ENST00000549358 TESK2Q96S53 571 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms