RNA–Protein interactions for RNA: ENST00000549107.5

PTPRR-208, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-208ENST00000549107 LAS1LQ9Y4W2 734 aaKnown RBP14.55□□□□□ -0.08
PTPRR-208ENST00000549107 EXOC6Q8TAG9 804 aa14.54□□□□□ -0.08
PTPRR-208ENST00000549107 LRRC37A3O60309 1634 aa14.54□□□□□ -0.08
PTPRR-208ENST00000549107 AHDC1Q5TGY3 1603 aaPredicted RBP14.54□□□□□ -0.08
PTPRR-208ENST00000549107 FAM208AQ9UK61 1670 aaKnown RBP14.54□□□□□ -0.08
PTPRR-208ENST00000549107 KIAA0232Q92628 1395 aa14.53□□□□□ -0.08
PTPRR-208ENST00000549107 ERBB3P21860 1342 aa14.53□□□□□ -0.08
PTPRR-208ENST00000549107 MCM10Q7L590 875 aa14.53□□□□□ -0.08
PTPRR-208ENST00000549107 CFAP44Q96MT7 982 aa14.53□□□□□ -0.08
PTPRR-208ENST00000549107 CRB1P82279 1406 aa14.52□□□□□ -0.08
PTPRR-208ENST00000549107 MAP3K5Q99683 1374 aa14.52□□□□□ -0.08
PTPRR-208ENST00000549107 C20orf194Q5TEA3 1177 aa14.52□□□□□ -0.09
PTPRR-208ENST00000549107 CRBNQ96SW2 442 aa14.52□□□□□ -0.09
PTPRR-208ENST00000549107 MBIPQ9NS73 344 aa14.52□□□□□ -0.09
PTPRR-208ENST00000549107 HTATSF1O43719 755 aaKnown RBP14.51□□□□□ -0.09
PTPRR-208ENST00000549107 RTF1Q92541 710 aaKnown RBP14.51□□□□□ -0.09
PTPRR-208ENST00000549107 GNAT3A8MTJ3 354 aa14.5□□□□□ -0.09
PTPRR-208ENST00000549107 CHRNA2Q15822 529 aa14.5□□□□□ -0.09
PTPRR-208ENST00000549107 B4GALNT3Q6L9W6 998 aa14.5□□□□□ -0.09
PTPRR-208ENST00000549107 CANXP27824 592 aaKnown RBP14.49□□□□□ -0.09
PTPRR-208ENST00000549107 BCL2L13Q9BXK5 485 aa14.49□□□□□ -0.09
PTPRR-208ENST00000549107 CHL1O00533 1208 aa14.48□□□□□ -0.09
PTPRR-208ENST00000549107 HAP1P54257 671 aaPredicted RBP14.48□□□□□ -0.09
PTPRR-208ENST00000549107 PLEKHO1Q53GL0 409 aaPredicted RBP14.48□□□□□ -0.09
PTPRR-208ENST00000549107 PRDM11Q9NQV5 511 aa14.48□□□□□ -0.09
PTPRR-208ENST00000549107 COL22A1Q8NFW1 1626 aaPredicted RBP14.48□□□□□ -0.09
PTPRR-208ENST00000549107 CSB-PGBD3P0DP91 1061 aa14.47□□□□□ -0.09
PTPRR-208ENST00000549107 PDE3AQ14432 1141 aa14.47□□□□□ -0.09
PTPRR-208ENST00000549107 PELP1Q8IZL8 1130 aaKnown RBP14.47□□□□□ -0.09
PTPRR-208ENST00000549107 SSH1Q8WYL5 1049 aa14.47□□□□□ -0.09
PTPRR-208ENST00000549107 FRAT1Q92837 279 aaPredicted RBP14.47□□□□□ -0.09
PTPRR-208ENST00000549107 ZNF428Q96B54 188 aa14.47□□□□□ -0.09
PTPRR-208ENST00000549107 CCDC136Q96JN2 1154 aa14.47□□□□□ -0.09
PTPRR-208ENST00000549107 SMC4Q9NTJ3 1288 aa14.47□□□□□ -0.09
PTPRR-208ENST00000549107 NLRP2Q9NX02 1062 aa14.47□□□□□ -0.09
PTPRR-208ENST00000549107 ALDH1L2Q3SY69 923 aa14.46□□□□□ -0.09
PTPRR-208ENST00000549107 AMOTQ4VCS5 1084 aa14.46□□□□□ -0.09
PTPRR-208ENST00000549107 PHLPP1O60346 1717 aa14.45□□□□□ -0.1
PTPRR-208ENST00000549107 VAMP4O75379 141 aa14.45□□□□□ -0.1
PTPRR-208ENST00000549107 TWISTNBQ3B726 338 aaPredicted RBP14.45□□□□□ -0.1
PTPRR-208ENST00000549107 ZNF530Q6P9A1 599 aaPredicted RBP14.45□□□□□ -0.1
PTPRR-208ENST00000549107 TSPYL6Q8N831 410 aa14.45□□□□□ -0.1
PTPRR-208ENST00000549107 C8orf58Q8NAV2 365 aa14.45□□□□□ -0.1
PTPRR-208ENST00000549107 IL17REQ8NFR9 667 aa14.45□□□□□ -0.1
PTPRR-208ENST00000549107 COL16A1Q07092 1604 aaPredicted RBP14.44□□□□□ -0.1
PTPRR-208ENST00000549107 COL5A2P05997 1499 aaPredicted RBP14.44□□□□□ -0.1
PTPRR-208ENST00000549107 UBAP1LF5GYI3 381 aa14.44□□□□□ -0.1
PTPRR-208ENST00000549107 AKAP4Q5JQC9 854 aa14.44□□□□□ -0.1
PTPRR-208ENST00000549107 MEGF6O75095 1541 aa14.44□□□□□ -0.1
PTPRR-208ENST00000549107 CEMIPQ8WUJ3 1361 aa14.44□□□□□ -0.1
PTPRR-208ENST00000549107 PLEKHG2Q9H7P9 1386 aa14.44□□□□□ -0.1
PTPRR-208ENST00000549107 ZKSCAN2Q63HK3 967 aa14.43□□□□□ -0.1
PTPRR-208ENST00000549107 PANK1Q8TE04 598 aa14.43□□□□□ -0.1
PTPRR-208ENST00000549107 RAPGEF4Q8WZA2 1011 aa14.43□□□□□ -0.1
PTPRR-208ENST00000549107 TSPYL4Q9UJ04 414 aa14.43□□□□□ -0.1
PTPRR-208ENST00000549107 WDR17Q8IZU2 1322 aa14.42□□□□□ -0.1
PTPRR-208ENST00000549107 KIF16BQ96L93 1317 aa14.42□□□□□ -0.1
PTPRR-208ENST00000549107 OVOS2A0A0G2JMS6 1433 aa14.42□□□□□ -0.1
PTPRR-208ENST00000549107 PKD1L3Q7Z443 1732 aa14.42□□□□□ -0.1
PTPRR-208ENST00000549107 ELL2O00472 640 aaPredicted RBP14.42□□□□□ -0.1
PTPRR-208ENST00000549107 TATP17735 454 aaPredicted RBP14.42□□□□□ -0.1
PTPRR-208ENST00000549107 C1orf141Q5JVX7 400 aa14.42□□□□□ -0.1
PTPRR-208ENST00000549107 TNNQ9UQP3 1299 aa14.42□□□□□ -0.1
PTPRR-208ENST00000549107 VIRMAQ69YN4 1812 aaKnown RBP14.42□□□□□ -0.1
PTPRR-208ENST00000549107 ADAMTS7Q9UKP4 1686 aa14.42□□□□□ -0.1
PTPRR-208ENST00000549107 TOM1O60784 492 aa14.41□□□□□ -0.1
PTPRR-208ENST00000549107 BRPF1P55201 1214 aaPredicted RBP14.41□□□□□ -0.1
PTPRR-208ENST00000549107 MRPL50Q8N5N7 158 aaKnown RBP14.41□□□□□ -0.1
PTPRR-208ENST00000549107 BABAM1Q9NWV8 329 aa14.41□□□□□ -0.1
PTPRR-208ENST00000549107 MIS18AQ9NYP9 233 aa14.41□□□□□ -0.1
PTPRR-208ENST00000549107 COL14A1Q05707 1796 aaKnown RBP14.41□□□□□ -0.1
PTPRR-208ENST00000549107 PARP4Q9UKK3 1724 aaKnown RBP14.41□□□□□ -0.1
PTPRR-208ENST00000549107 MS4A1P11836 297 aa14.4□□□□□ -0.1
PTPRR-208ENST00000549107 RLBP1P12271 317 aa14.4□□□□□ -0.1
PTPRR-208ENST00000549107 TAF7Q15545 349 aaPredicted RBP14.4□□□□□ -0.1
PTPRR-208ENST00000549107 KRT24Q2M2I5 525 aa14.4□□□□□ -0.1
PTPRR-208ENST00000549107 NOB1Q9ULX3 412 aaKnown RBP14.4□□□□□ -0.1
PTPRR-208ENST00000549107 COG6Q9Y2V7 657 aa14.4□□□□□ -0.1
PTPRR-208ENST00000549107 KDM3BQ7LBC6 1761 aa14.39□□□□□ -0.11
PTPRR-208ENST00000549107 IPO8O15397 1037 aaKnown RBP14.39□□□□□ -0.11
PTPRR-208ENST00000549107 TRIM27P14373 513 aa14.39□□□□□ -0.11
PTPRR-208ENST00000549107 ATF7IPQ6VMQ6 1270 aa14.39□□□□□ -0.11
PTPRR-208ENST00000549107 DZIP1LQ8IYY4 767 aaKnown RBP14.39□□□□□ -0.11
PTPRR-208ENST00000549107 LGR6Q9HBX8 967 aa14.39□□□□□ -0.11
PTPRR-208ENST00000549107 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.39□□□□□ -0.11
PTPRR-208ENST00000549107 SPG7Q9UQ90 795 aa14.39□□□□□ -0.11
PTPRR-208ENST00000549107 SIPA1L3O60292 1781 aaPredicted RBP14.38□□□□□ -0.11
PTPRR-208ENST00000549107 RNMTO43148 476 aaKnown RBP14.38□□□□□ -0.11
PTPRR-208ENST00000549107 PIP4K2BP78356 416 aa14.38□□□□□ -0.11
PTPRR-208ENST00000549107 MPRIPQ6WCQ1 1025 aa14.38□□□□□ -0.11
PTPRR-208ENST00000549107 TOM1L2Q6ZVM7 507 aa14.38□□□□□ -0.11
PTPRR-208ENST00000549107 FTSJ3Q8IY81 847 aaKnown RBP14.38□□□□□ -0.11
PTPRR-208ENST00000549107 CLUAP1Q96AJ1 413 aa14.38□□□□□ -0.11
PTPRR-208ENST00000549107 TCERG1O14776 1098 aaKnown RBP14.37□□□□□ -0.11
PTPRR-208ENST00000549107 CARD10Q9BWT7 1032 aa14.37□□□□□ -0.11
PTPRR-208ENST00000549107 SCN11AQ9UI33 1791 aa14.37□□□□□ -0.11
PTPRR-208ENST00000549107 EVA1CP58658 441 aa14.36□□□□□ -0.11
PTPRR-208ENST00000549107 TEFQ10587 303 aa14.36□□□□□ -0.11
PTPRR-208ENST00000549107 MVPQ14764 893 aaKnown RBP14.36□□□□□ -0.11
PTPRR-208ENST00000549107 PPP4R3CPQ6ZMV5 832 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms