RNA–Protein interactions for RNA: ENST00000549040.5

RFX4-208, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-208ENST00000549040 ANKARQ7Z5J8 1434 aa11.21□□□□□ -0.61
RFX4-208ENST00000549040 PTGER2P43116 358 aa11.21□□□□□ -0.61
RFX4-208ENST00000549040 PSEN2P49810 448 aa11.21□□□□□ -0.61
RFX4-208ENST00000549040 PMFBP1Q8TBY8 1022 aa11.21□□□□□ -0.61
RFX4-208ENST00000549040 TMC1Q8TDI8 760 aa11.21□□□□□ -0.61
RFX4-208ENST00000549040 PCDHGA10Q9Y5H3 936 aa11.21□□□□□ -0.61
RFX4-208ENST00000549040 PHF14O94880 888 aa11.2□□□□□ -0.62
RFX4-208ENST00000549040 PDIA6Q15084 440 aa11.2□□□□□ -0.62
RFX4-208ENST00000549040 ESCO1Q5FWF5 840 aa11.2□□□□□ -0.62
RFX4-208ENST00000549040 FMN2Q9NZ56 1722 aa11.2□□□□□ -0.62
RFX4-208ENST00000549040 CPSF1Q10570 1443 aaKnown RBP11.19□□□□□ -0.62
RFX4-208ENST00000549040 PPIP5K1Q6PFW1 1433 aa11.19□□□□□ -0.62
RFX4-208ENST00000549040 ACEP12821 1306 aa11.19□□□□□ -0.62
RFX4-208ENST00000549040 HAP1P54257 671 aaPredicted RBP11.19□□□□□ -0.62
RFX4-208ENST00000549040 ILDR2Q71H61 639 aa11.19□□□□□ -0.62
RFX4-208ENST00000549040 BRINP3Q76B58 766 aa11.19□□□□□ -0.62
RFX4-208ENST00000549040 POLR3AO14802 1390 aaPredicted RBP11.18□□□□□ -0.62
RFX4-208ENST00000549040 KCNK17Q96T54 332 aa11.18□□□□□ -0.62
RFX4-208ENST00000549040 ADAM33Q9BZ11 813 aa11.18□□□□□ -0.62
RFX4-208ENST00000549040 FOXO3O43524 673 aa11.17□□□□□ -0.62
RFX4-208ENST00000549040 PTPREP23469 700 aa11.17□□□□□ -0.62
RFX4-208ENST00000549040 DMRTA1Q5VZB9 504 aa11.17□□□□□ -0.62
RFX4-208ENST00000549040 TYW1BQ6NUM6 668 aa11.17□□□□□ -0.62
RFX4-208ENST00000549040 DDX17Q92841 729 aaKnown RBP11.17□□□□□ -0.62
RFX4-208ENST00000549040 FBXW7Q969H0 707 aa11.17□□□□□ -0.62
RFX4-208ENST00000549040 EPAS1Q99814 870 aa11.17□□□□□ -0.62
RFX4-208ENST00000549040 A0A1W2PP64 1363 aa11.16□□□□□ -0.62
RFX4-208ENST00000549040 NINLQ9Y2I6 1382 aa11.16□□□□□ -0.62
RFX4-208ENST00000549040 DDX12PQ92771 950 aa11.16□□□□□ -0.62
RFX4-208ENST00000549040 SSH2Q76I76 1423 aa11.16□□□□□ -0.62
RFX4-208ENST00000549040 ANKRD36BQ8N2N9 1353 aa11.16□□□□□ -0.62
RFX4-208ENST00000549040 MYOM1P52179 1685 aa11.15□□□□□ -0.62
RFX4-208ENST00000549040 IQSEC2Q5JU85 1478 aa11.15□□□□□ -0.62
RFX4-208ENST00000549040 TK2O00142 265 aa11.15□□□□□ -0.62
RFX4-208ENST00000549040 NGDNQ8NEJ9 315 aaKnown RBP11.15□□□□□ -0.62
RFX4-208ENST00000549040 ARHGEF1Q92888 912 aaKnown RBP11.15□□□□□ -0.62
RFX4-208ENST00000549040 TERF2IPQ9NYB0 399 aa11.15□□□□□ -0.62
RFX4-208ENST00000549040 RGPD8O14715 1765 aaPredicted RBP11.14□□□□□ -0.63
RFX4-208ENST00000549040 UBAP1LF5GYI3 381 aa11.14□□□□□ -0.63
RFX4-208ENST00000549040 TOM1O60784 492 aa11.14□□□□□ -0.63
RFX4-208ENST00000549040 ADGRD1Q6QNK2 874 aa11.14□□□□□ -0.63
RFX4-208ENST00000549040 HDGFL2Q7Z4V5 671 aaPredicted RBP11.14□□□□□ -0.63
RFX4-208ENST00000549040 TOPAZ1Q8N9V7 1692 aa11.14□□□□□ -0.63
RFX4-208ENST00000549040 SOCS7O14512 581 aa11.13□□□□□ -0.63
RFX4-208ENST00000549040 FYB1O15117 783 aa11.13□□□□□ -0.63
RFX4-208ENST00000549040 XPCQ01831 940 aaPredicted RBP11.13□□□□□ -0.63
RFX4-208ENST00000549040 PSME1Q06323 249 aa11.13□□□□□ -0.63
RFX4-208ENST00000549040 KRT28Q7Z3Y7 464 aa11.13□□□□□ -0.63
RFX4-208ENST00000549040 KCNV2Q8TDN2 545 aa11.13□□□□□ -0.63
RFX4-208ENST00000549040 KTN1Q86UP2 1357 aaKnown RBP11.13□□□□□ -0.63
RFX4-208ENST00000549040 TTC21BQ7Z4L5 1316 aa11.12□□□□□ -0.63
RFX4-208ENST00000549040 USP6P35125 1406 aa11.12□□□□□ -0.63
RFX4-208ENST00000549040 SOS2Q07890 1332 aaPredicted RBP11.11□□□□□ -0.63
RFX4-208ENST00000549040 PIP4K2BP78356 416 aa11.11□□□□□ -0.63
RFX4-208ENST00000549040 KNSTRNQ9Y448 316 aa11.11□□□□□ -0.63
RFX4-208ENST00000549040 NSD3Q9BZ95 1437 aa11.1□□□□□ -0.63
RFX4-208ENST00000549040 NME9Q86XW9 330 aa11.1□□□□□ -0.63
RFX4-208ENST00000549040 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.1□□□□□ -0.63
RFX4-208ENST00000549040 SLC4A5Q9BY07 1137 aa11.1□□□□□ -0.63
RFX4-208ENST00000549040 NPHP3Q7Z494 1330 aa11.09□□□□□ -0.63
RFX4-208ENST00000549040 EDC4Q6P2E9 1401 aaKnown RBP11.09□□□□□ -0.63
RFX4-208ENST00000549040 PXDNQ92626 1479 aa11.09□□□□□ -0.63
RFX4-208ENST00000549040 DIEXFQ68CQ4 756 aaKnown RBP11.09□□□□□ -0.63
RFX4-208ENST00000549040 BRD4O60885 1362 aaPredicted RBP11.08□□□□□ -0.64
RFX4-208ENST00000549040 NPC1L1Q9UHC9 1359 aa11.08□□□□□ -0.64
RFX4-208ENST00000549040 GRXCR2A6NFK2 248 aa11.08□□□□□ -0.64
RFX4-208ENST00000549040 HRO43593 1189 aa11.08□□□□□ -0.64
RFX4-208ENST00000549040 NBR1Q14596 966 aa11.08□□□□□ -0.64
RFX4-208ENST00000549040 C6orf132Q5T0Z8 1188 aa11.08□□□□□ -0.64
RFX4-208ENST00000549040 ZBED2Q9BTP6 218 aa11.08□□□□□ -0.64
RFX4-208ENST00000549040 GGNBP2Q9H3C7 697 aa11.08□□□□□ -0.64
RFX4-208ENST00000549040 VPS9D1Q9Y2B5 631 aa11.08□□□□□ -0.64
RFX4-208ENST00000549040 CGNL1Q0VF96 1302 aa11.08□□□□□ -0.64
RFX4-208ENST00000549040 SPATA31A3Q5VYP0 1347 aa11.08□□□□□ -0.64
RFX4-208ENST00000549040 TTC21AQ8NDW8 1320 aa11.08□□□□□ -0.64
RFX4-208ENST00000549040 SBNO1A3KN83 1393 aa11.07□□□□□ -0.64
RFX4-208ENST00000549040 CC2D1BQ5T0F9 858 aaKnown RBP11.07□□□□□ -0.64
RFX4-208ENST00000549040 ITSN1Q15811 1721 aa11.06□□□□□ -0.64
RFX4-208ENST00000549040 USP31Q70CQ4 1352 aa11.06□□□□□ -0.64
RFX4-208ENST00000549040 AKAP12Q02952 1782 aa11.06□□□□□ -0.64
RFX4-208ENST00000549040 PPP1R3GB7ZBB8 358 aa11.06□□□□□ -0.64
RFX4-208ENST00000549040 FBLN1P23142 703 aa11.06□□□□□ -0.64
RFX4-208ENST00000549040 NUTM2GQ5VZR2 741 aa11.06□□□□□ -0.64
RFX4-208ENST00000549040 ABTB2Q8N961 1025 aa11.06□□□□□ -0.64
RFX4-208ENST00000549040 RNF166Q96A37 237 aaPredicted RBP11.06□□□□□ -0.64
RFX4-208ENST00000549040 KIF1AQ12756 1690 aa11.05□□□□□ -0.64
RFX4-208ENST00000549040 ROBO1Q9Y6N7 1651 aa11.05□□□□□ -0.64
RFX4-208ENST00000549040 COL9A1P20849 921 aa11.05□□□□□ -0.64
RFX4-208ENST00000549040 EN1Q05925 392 aaPredicted RBP11.05□□□□□ -0.64
RFX4-208ENST00000549040 CNGB1Q14028 1251 aaPredicted RBP11.05□□□□□ -0.64
RFX4-208ENST00000549040 PRKRIP1Q9H875 184 aaPredicted RBP11.05□□□□□ -0.64
RFX4-208ENST00000549040 MON2Q7Z3U7 1717 aa11.04□□□□□ -0.64
RFX4-208ENST00000549040 NRKQ7Z2Y5 1582 aa11.04□□□□□ -0.64
RFX4-208ENST00000549040 VSIG10Q8N0Z9 540 aa11.04□□□□□ -0.64
RFX4-208ENST00000549040 TRPM3Q9HCF6 1732 aaPredicted RBP11.04□□□□□ -0.64
RFX4-208ENST00000549040 PARD3Q8TEW0 1356 aa11.03□□□□□ -0.64
RFX4-208ENST00000549040 AHDC1Q5TGY3 1603 aaPredicted RBP11.03□□□□□ -0.64
RFX4-208ENST00000549040 MAP3K7O43318 606 aa11.03□□□□□ -0.64
RFX4-208ENST00000549040 HSPA1LP34931 641 aa11.03□□□□□ -0.64
RFX4-208ENST00000549040 LRRC59Q96AG4 307 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms