RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 APBB1O00213 710 aa9.78□□□□□ -0.84
CNOT2-216ENST00000548939 RNF144AP50876 292 aaPredicted RBP9.78□□□□□ -0.84
CNOT2-216ENST00000548939 RNFT1Q5M7Z0 435 aa9.78□□□□□ -0.84
CNOT2-216ENST00000548939 CC2D2BQ6DHV5 1058 aa9.78□□□□□ -0.84
CNOT2-216ENST00000548939 PRICKLE2Q7Z3G6 844 aa9.78□□□□□ -0.84
CNOT2-216ENST00000548939 MEN1O00255 615 aa9.77□□□□□ -0.85
CNOT2-216ENST00000548939 ERVK-9P63128 1117 aa9.77□□□□□ -0.85
CNOT2-216ENST00000548939 TPRNQ4KMQ1 711 aa9.77□□□□□ -0.85
CNOT2-216ENST00000548939 SNRKQ9NRH2 765 aa9.77□□□□□ -0.85
CNOT2-216ENST00000548939 A0A1W2PRU2 124 aa9.75□□□□□ -0.85
CNOT2-216ENST00000548939 GPR37L1O60883 481 aa9.75□□□□□ -0.85
CNOT2-216ENST00000548939 RHOQP17081 205 aa9.75□□□□□ -0.85
CNOT2-216ENST00000548939 PCDHB11Q9Y5F2 797 aa9.75□□□□□ -0.85
CNOT2-216ENST00000548939 GPC1P35052 558 aa9.74□□□□□ -0.85
CNOT2-216ENST00000548939 ESF1Q9H501 851 aaKnown RBP9.74□□□□□ -0.85
CNOT2-216ENST00000548939 SCTRP47872 440 aa9.73□□□□□ -0.85
CNOT2-216ENST00000548939 CYP2U1Q7Z449 544 aa9.73□□□□□ -0.85
CNOT2-216ENST00000548939 NLRP3Q96P20 1036 aa9.73□□□□□ -0.85
CNOT2-216ENST00000548939 CUEDC1Q9NWM3 386 aaPredicted RBP9.73□□□□□ -0.85
CNOT2-216ENST00000548939 SLURP2P0DP57 97 aa9.71□□□□□ -0.86
CNOT2-216ENST00000548939 SLC27A3Q5K4L6 730 aa9.71□□□□□ -0.86
CNOT2-216ENST00000548939 ZNF385CQ66K41 422 aaPredicted RBP9.71□□□□□ -0.86
CNOT2-216ENST00000548939 SVOPQ8N4V2 548 aa9.71□□□□□ -0.86
CNOT2-216ENST00000548939 ADAMTS8Q9UP79 889 aa9.71□□□□□ -0.86
CNOT2-216ENST00000548939 KCNMA1Q12791 1236 aa9.7□□□□□ -0.86
CNOT2-216ENST00000548939 CLN3Q13286 438 aa9.7□□□□□ -0.86
CNOT2-216ENST00000548939 OSBPL3Q9H4L5 887 aa9.7□□□□□ -0.86
CNOT2-216ENST00000548939 WHAMMQ8TF30 809 aa9.69□□□□□ -0.86
CNOT2-216ENST00000548939 ARHGEF10LQ9HCE6 1279 aa9.69□□□□□ -0.86
CNOT2-216ENST00000548939 TRAK2O60296 914 aa9.68□□□□□ -0.86
CNOT2-216ENST00000548939 POU4F2Q12837 409 aa9.68□□□□□ -0.86
CNOT2-216ENST00000548939 RIPOR1Q6ZS17 1223 aa9.68□□□□□ -0.86
CNOT2-216ENST00000548939 TRIM22Q8IYM9 498 aa9.68□□□□□ -0.86
CNOT2-216ENST00000548939 GRIP2Q9C0E4 1043 aa9.68□□□□□ -0.86
CNOT2-216ENST00000548939 CEP126Q9P2H0 1117 aa9.68□□□□□ -0.86
CNOT2-216ENST00000548939 ADAMTS2O95450 1211 aa9.67□□□□□ -0.86
CNOT2-216ENST00000548939 ZNF837Q96EG3 531 aaPredicted RBP9.67□□□□□ -0.86
CNOT2-216ENST00000548939 GMCL1Q96IK5 515 aa9.67□□□□□ -0.86
CNOT2-216ENST00000548939 PRM3Q9NNZ6 103 aa9.67□□□□□ -0.86
CNOT2-216ENST00000548939 TBC1D2BQ9UPU7 963 aa9.67□□□□□ -0.86
CNOT2-216ENST00000548939 DYRK1BQ9Y463 629 aa9.67□□□□□ -0.86
CNOT2-216ENST00000548939 SRSF11Q05519 484 aaKnown RBP9.66□□□□□ -0.86
CNOT2-216ENST00000548939 GAS6Q14393 721 aa9.66□□□□□ -0.86
CNOT2-216ENST00000548939 NBPF10Q6P3W6 841 aaKnown RBP9.66□□□□□ -0.86
CNOT2-216ENST00000548939 FOXR1Q6PIV2 292 aa9.66□□□□□ -0.86
CNOT2-216ENST00000548939 NBPF15Q8N660 670 aa9.66□□□□□ -0.86
CNOT2-216ENST00000548939 GAS2L1Q99501 681 aaPredicted RBP9.66□□□□□ -0.86
CNOT2-216ENST00000548939 RNF225M0QZC1 329 aaPredicted RBP9.65□□□□□ -0.86
CNOT2-216ENST00000548939 MYCP01106 439 aaPredicted RBP9.65□□□□□ -0.86
CNOT2-216ENST00000548939 DBN1Q16643 649 aa9.65□□□□□ -0.86
CNOT2-216ENST00000548939 RAB6BQ9NRW1 208 aa9.65□□□□□ -0.86
CNOT2-216ENST00000548939 H7C1W4 665 aa9.64□□□□□ -0.87
CNOT2-216ENST00000548939 ARHGEF15O94989 841 aa9.64□□□□□ -0.87
CNOT2-216ENST00000548939 GNRH1P01148 92 aa9.64□□□□□ -0.87
CNOT2-216ENST00000548939 GSK3AP49840 483 aa9.64□□□□□ -0.87
CNOT2-216ENST00000548939 CCDC85AQ96PX6 553 aaPredicted RBP9.64□□□□□ -0.87
CNOT2-216ENST00000548939 CDCA7Q9BWT1 371 aaPredicted RBP9.64□□□□□ -0.87
CNOT2-216ENST00000548939 SPATA31C2B4DYI2 1134 aa9.63□□□□□ -0.87
CNOT2-216ENST00000548939 GPR25O00155 361 aa9.63□□□□□ -0.87
CNOT2-216ENST00000548939 EIF4G2P78344 907 aaKnown RBP eCLIP9.63□□□□□ -0.87
CNOT2-216ENST00000548939 WDR44Q5JSH3 913 aa9.63□□□□□ -0.87
CNOT2-216ENST00000548939 TAS1R3Q7RTX0 852 aa9.63□□□□□ -0.87
CNOT2-216ENST00000548939 TIMMDC1Q9NPL8 285 aa9.63□□□□□ -0.87
CNOT2-216ENST00000548939 WASLO00401 505 aaPredicted RBP9.62□□□□□ -0.87
CNOT2-216ENST00000548939 MAP3K10Q02779 954 aa9.62□□□□□ -0.87
CNOT2-216ENST00000548939 RASSF7Q02833 373 aa9.62□□□□□ -0.87
CNOT2-216ENST00000548939 LYPD4Q6UWN0 246 aa9.62□□□□□ -0.87
CNOT2-216ENST00000548939 TMEM151AQ8N4L1 468 aa9.62□□□□□ -0.87
CNOT2-216ENST00000548939 CNKSR1Q969H4 720 aa9.62□□□□□ -0.87
CNOT2-216ENST00000548939 ESYT1Q9BSJ8 1104 aa9.62□□□□□ -0.87
CNOT2-216ENST00000548939 MBIPQ9NS73 344 aa9.62□□□□□ -0.87
CNOT2-216ENST00000548939 IL2RAP01589 272 aa9.61□□□□□ -0.87
CNOT2-216ENST00000548939 MARSP56192 900 aaKnown RBP9.61□□□□□ -0.87
CNOT2-216ENST00000548939 GTPBP3Q969Y2 492 aaKnown RBP9.61□□□□□ -0.87
CNOT2-216ENST00000548939 GDF11O95390 407 aa9.6□□□□□ -0.87
CNOT2-216ENST00000548939 CENPCQ03188 943 aa9.6□□□□□ -0.87
CNOT2-216ENST00000548939 IRF5Q13568 498 aa9.6□□□□□ -0.87
CNOT2-216ENST00000548939 KCTD17Q8N5Z5 321 aa9.6□□□□□ -0.87
CNOT2-216ENST00000548939 TRERF1Q96PN7 1200 aa9.6□□□□□ -0.87
CNOT2-216ENST00000548939 F11P03951 625 aa9.59□□□□□ -0.87
CNOT2-216ENST00000548939 CELA2BP08218 269 aaPredicted RBP9.59□□□□□ -0.87
CNOT2-216ENST00000548939 SLFNL1Q499Z3 407 aa9.59□□□□□ -0.87
CNOT2-216ENST00000548939 DOLKQ9UPQ8 538 aa9.59□□□□□ -0.87
CNOT2-216ENST00000548939 TSGA10IPQ3SY00 556 aa9.58□□□□□ -0.88
CNOT2-216ENST00000548939 RNF135Q8IUD6 432 aa9.58□□□□□ -0.88
CNOT2-216ENST00000548939 PHTF2Q8N3S3 785 aa9.58□□□□□ -0.88
CNOT2-216ENST00000548939 XAGE2Q96GT9 111 aa9.58□□□□□ -0.88
CNOT2-216ENST00000548939 ZSCAN10Q96SZ4 725 aaPredicted RBP9.58□□□□□ -0.88
CNOT2-216ENST00000548939 NUCKS1Q9H1E3 243 aaKnown RBP9.58□□□□□ -0.88
CNOT2-216ENST00000548939 IGF1RP08069 1367 aa9.58□□□□□ -0.88
CNOT2-216ENST00000548939 GTF2E1P29083 439 aaPredicted RBP9.57□□□□□ -0.88
CNOT2-216ENST00000548939 IRS1P35568 1242 aa9.57□□□□□ -0.88
CNOT2-216ENST00000548939 PHKA2P46019 1235 aa9.57□□□□□ -0.88
CNOT2-216ENST00000548939 VAC14Q08AM6 782 aa9.57□□□□□ -0.88
CNOT2-216ENST00000548939 USP4Q13107 963 aa9.57□□□□□ -0.88
CNOT2-216ENST00000548939 ESCO1Q5FWF5 840 aa9.57□□□□□ -0.88
CNOT2-216ENST00000548939 GNASQ5JWF2 1037 aa9.56□□□□□ -0.88
CNOT2-216ENST00000548939 TMEM214Q6NUQ4 689 aaKnown RBP9.56□□□□□ -0.88
CNOT2-216ENST00000548939 SCARF2Q96GP6 870 aaPredicted RBP9.56□□□□□ -0.88
CNOT2-216ENST00000548939 GDPD2Q9HCC8 539 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms