RNA–Protein interactions for RNA: ENST00000548792.1

SRSF9-204, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 2

Gene SRSF9, Length 1,446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-204ENST00000548792 TMC1Q8TDI8 760 aa12.96□□□□□ -0.34
SRSF9-204ENST00000548792 CIZ1Q9ULV3 898 aaPredicted RBP12.96□□□□□ -0.34
SRSF9-204ENST00000548792 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.95□□□□□ -0.34
SRSF9-204ENST00000548792 USP31Q70CQ4 1352 aa12.94□□□□□ -0.34
SRSF9-204ENST00000548792 CSB-PGBD3P0DP91 1061 aa12.94□□□□□ -0.34
SRSF9-204ENST00000548792 HDGFL2Q7Z4V5 671 aaPredicted RBP12.94□□□□□ -0.34
SRSF9-204ENST00000548792 ZNF579Q8NAF0 562 aaKnown RBP12.94□□□□□ -0.34
SRSF9-204ENST00000548792 EDC4Q6P2E9 1401 aaKnown RBP12.94□□□□□ -0.34
SRSF9-204ENST00000548792 CDCA7Q9BWT1 371 aaPredicted RBP12.93□□□□□ -0.34
SRSF9-204ENST00000548792 CARD10Q9BWT7 1032 aa12.93□□□□□ -0.34
SRSF9-204ENST00000548792 NME9Q86XW9 330 aa12.92□□□□□ -0.34
SRSF9-204ENST00000548792 CCER1Q8TC90 406 aaPredicted RBP12.92□□□□□ -0.34
SRSF9-204ENST00000548792 SLC12A5Q9H2X9 1139 aa12.92□□□□□ -0.34
SRSF9-204ENST00000548792 A0A1W2PP64 1363 aa12.92□□□□□ -0.34
SRSF9-204ENST00000548792 CCDC7Q96M83 1385 aa12.92□□□□□ -0.34
SRSF9-204ENST00000548792 POTEMA6NI47 508 aa12.91□□□□□ -0.34
SRSF9-204ENST00000548792 PHF12Q96QT6 1004 aa12.91□□□□□ -0.34
SRSF9-204ENST00000548792 TERF2IPQ9NYB0 399 aa12.91□□□□□ -0.34
SRSF9-204ENST00000548792 NBPF14Q5TI25 921 aa12.9□□□□□ -0.34
SRSF9-204ENST00000548792 PUS7Q96PZ0 661 aaKnown RBP12.9□□□□□ -0.34
SRSF9-204ENST00000548792 BCL9O00512 1426 aa12.9□□□□□ -0.34
SRSF9-204ENST00000548792 TNS2Q63HR2 1409 aa12.9□□□□□ -0.34
SRSF9-204ENST00000548792 MARCH10Q8NA82 808 aaPredicted RBP12.89□□□□□ -0.35
SRSF9-204ENST00000548792 NINLQ9Y2I6 1382 aa12.89□□□□□ -0.35
SRSF9-204ENST00000548792 FAM208AQ9UK61 1670 aaKnown RBP12.89□□□□□ -0.35
SRSF9-204ENST00000548792 ERBB3P21860 1342 aa12.89□□□□□ -0.35
SRSF9-204ENST00000548792 ST20-MTHFSA0A0A6YYL1 179 aa12.88□□□□□ -0.35
SRSF9-204ENST00000548792 TESK2Q96S53 571 aa12.88□□□□□ -0.35
SRSF9-204ENST00000548792 BCL11BQ9C0K0 894 aaPredicted RBP12.88□□□□□ -0.35
SRSF9-204ENST00000548792 RTN4Q9NQC3 1192 aaKnown RBP12.88□□□□□ -0.35
SRSF9-204ENST00000548792 NHSQ6T4R5 1651 aa12.88□□□□□ -0.35
SRSF9-204ENST00000548792 EXOC5O00471 708 aa12.88□□□□□ -0.35
SRSF9-204ENST00000548792 PLSCR1O15162 318 aa12.88□□□□□ -0.35
SRSF9-204ENST00000548792 SLC24A1O60721 1099 aa12.87□□□□□ -0.35
SRSF9-204ENST00000548792 PTF1AQ7RTS3 328 aa12.87□□□□□ -0.35
SRSF9-204ENST00000548792 NLRP2Q9NX02 1062 aa12.87□□□□□ -0.35
SRSF9-204ENST00000548792 KAT6BQ8WYB5 2073 aa12.86□□□□□ -0.35
SRSF9-204ENST00000548792 PYGBP11216 843 aa12.86□□□□□ -0.35
SRSF9-204ENST00000548792 AMER1Q5JTC6 1135 aaPredicted RBP12.86□□□□□ -0.35
SRSF9-204ENST00000548792 ANKRD24Q8TF21 1146 aa12.85□□□□□ -0.35
SRSF9-204ENST00000548792 CASZ1Q86V15 1759 aa12.85□□□□□ -0.35
SRSF9-204ENST00000548792 USP47Q96K76 1375 aa12.84□□□□□ -0.35
SRSF9-204ENST00000548792 KIF12Q96FN5 646 aa12.84□□□□□ -0.35
SRSF9-204ENST00000548792 ANKRD36BQ8N2N9 1353 aa12.83□□□□□ -0.35
SRSF9-204ENST00000548792 BTAF1O14981 1849 aa12.83□□□□□ -0.36
SRSF9-204ENST00000548792 KIF20BQ96Q89 1820 aa12.83□□□□□ -0.36
SRSF9-204ENST00000548792 IL2RBP14784 551 aa12.83□□□□□ -0.36
SRSF9-204ENST00000548792 POTEGQ6S5H5 508 aa12.83□□□□□ -0.36
SRSF9-204ENST00000548792 COG3Q96JB2 828 aa12.83□□□□□ -0.36
SRSF9-204ENST00000548792 RGPD2P0DJD1 1756 aa12.83□□□□□ -0.36
SRSF9-204ENST00000548792 CHRM1P11229 460 aaPredicted RBP12.82□□□□□ -0.36
SRSF9-204ENST00000548792 TMF1P82094 1093 aa12.82□□□□□ -0.36
SRSF9-204ENST00000548792 IP6K1Q92551 441 aa12.82□□□□□ -0.36
SRSF9-204ENST00000548792 ANO8Q9HCE9 1232 aaPredicted RBP12.82□□□□□ -0.36
SRSF9-204ENST00000548792 SPON1Q9HCB6 807 aa12.81□□□□□ -0.36
SRSF9-204ENST00000548792 KCNQ2O43526 872 aa12.8□□□□□ -0.36
SRSF9-204ENST00000548792 LTV1Q96GA3 475 aaPredicted RBP12.8□□□□□ -0.36
SRSF9-204ENST00000548792 MAP3K19Q56UN5 1328 aa12.8□□□□□ -0.36
SRSF9-204ENST00000548792 MYOM1P52179 1685 aa12.8□□□□□ -0.36
SRSF9-204ENST00000548792 MAP3K13O43283 966 aa12.79□□□□□ -0.36
SRSF9-204ENST00000548792 TXNRD1Q16881 649 aa12.79□□□□□ -0.36
SRSF9-204ENST00000548792 ACSBG1Q96GR2 724 aa12.79□□□□□ -0.36
SRSF9-204ENST00000548792 PPP1R1BQ9UD71 204 aaPredicted RBP12.79□□□□□ -0.36
SRSF9-204ENST00000548792 SHANK3Q9BYB0 1731 aa12.79□□□□□ -0.36
SRSF9-204ENST00000548792 ECM2O94769 699 aaPredicted RBP12.79□□□□□ -0.36
SRSF9-204ENST00000548792 HOXC9P31274 260 aa12.79□□□□□ -0.36
SRSF9-204ENST00000548792 AMPHP49418 695 aa12.79□□□□□ -0.36
SRSF9-204ENST00000548792 DOT1LQ8TEK3 1739 aa12.78□□□□□ -0.36
SRSF9-204ENST00000548792 RTL1A6NKG5 1358 aa12.78□□□□□ -0.36
SRSF9-204ENST00000548792 PAPPAQ13219 1627 aa12.78□□□□□ -0.36
SRSF9-204ENST00000548792 CDCA8Q53HL2 280 aa12.78□□□□□ -0.36
SRSF9-204ENST00000548792 DCBLD2Q96PD2 775 aa12.78□□□□□ -0.36
SRSF9-204ENST00000548792 STK32BQ9NY57 414 aa12.78□□□□□ -0.36
SRSF9-204ENST00000548792 FBLN1P23142 703 aa12.77□□□□□ -0.37
SRSF9-204ENST00000548792 FYB1O15117 783 aa12.76□□□□□ -0.37
SRSF9-204ENST00000548792 SLC15A2Q16348 729 aa12.76□□□□□ -0.37
SRSF9-204ENST00000548792 RNF25Q96BH1 459 aaPredicted RBP12.76□□□□□ -0.37
SRSF9-204ENST00000548792 OTUD5Q96G74 571 aa12.76□□□□□ -0.37
SRSF9-204ENST00000548792 PDGFDQ9GZP0 370 aaPredicted RBP12.76□□□□□ -0.37
SRSF9-204ENST00000548792 GGNBP2Q9H3C7 697 aa12.76□□□□□ -0.37
SRSF9-204ENST00000548792 RRS1Q15050 365 aaKnown RBP12.75□□□□□ -0.37
SRSF9-204ENST00000548792 DDX54Q8TDD1 881 aaKnown RBP12.75□□□□□ -0.37
SRSF9-204ENST00000548792 MS4A3Q96HJ5 214 aa12.75□□□□□ -0.37
SRSF9-204ENST00000548792 TIMELESSQ9UNS1 1208 aa12.75□□□□□ -0.37
SRSF9-204ENST00000548792 PCDHB13Q9Y5F0 798 aa12.75□□□□□ -0.37
SRSF9-204ENST00000548792 MEGF6O75095 1541 aa12.75□□□□□ -0.37
SRSF9-204ENST00000548792 SMG6Q86US8 1419 aaKnown RBP12.74□□□□□ -0.37
SRSF9-204ENST00000548792 CLSPNQ9HAW4 1339 aa12.74□□□□□ -0.37
SRSF9-204ENST00000548792 GALR2O43603 387 aaPredicted RBP12.74□□□□□ -0.37
SRSF9-204ENST00000548792 ZBTB7AO95365 584 aa12.74□□□□□ -0.37
SRSF9-204ENST00000548792 SGIP1Q9BQI5 828 aa12.74□□□□□ -0.37
SRSF9-204ENST00000548792 QSER1Q2KHR3 1735 aa12.74□□□□□ -0.37
SRSF9-204ENST00000548792 CLCN6P51797 869 aa12.73□□□□□ -0.37
SRSF9-204ENST00000548792 PCDH10Q9P2E7 1040 aa12.73□□□□□ -0.37
SRSF9-204ENST00000548792 LY75O60449 1722 aa12.73□□□□□ -0.37
SRSF9-204ENST00000548792 NSD3Q9BZ95 1437 aa12.73□□□□□ -0.37
SRSF9-204ENST00000548792 UTRNP46939 3433 aa12.73□□□□□ -0.37
SRSF9-204ENST00000548792 IFNL1Q8IU54 200 aa12.72□□□□□ -0.37
SRSF9-204ENST00000548792 FLT4P35916 1363 aa12.72□□□□□ -0.37
SRSF9-204ENST00000548792 ANKRD26Q9UPS8 1709 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms