RNA–Protein interactions for RNA: ENST00000548640.5

TMEM106C-209, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-209ENST00000548640 ATF3P18847 181 aa17.73■□□□□ 0.43
TMEM106C-209ENST00000548640 MCM10Q7L590 875 aa17.73■□□□□ 0.43
TMEM106C-209ENST00000548640 TSPYL6Q8N831 410 aa17.73■□□□□ 0.43
TMEM106C-209ENST00000548640 C8orf58Q8NAV2 365 aa17.73■□□□□ 0.43
TMEM106C-209ENST00000548640 RBM33Q96EV2 1170 aaKnown RBP17.73■□□□□ 0.43
TMEM106C-209ENST00000548640 MAP3K5Q99683 1374 aa17.72■□□□□ 0.43
TMEM106C-209ENST00000548640 GNAT3A8MTJ3 354 aa17.72■□□□□ 0.43
TMEM106C-209ENST00000548640 ANP32EQ9BTT0 268 aa17.72■□□□□ 0.43
TMEM106C-209ENST00000548640 ZBTB40Q9NUA8 1239 aa17.72■□□□□ 0.43
TMEM106C-209ENST00000548640 MST1RQ04912 1400 aa17.72■□□□□ 0.43
TMEM106C-209ENST00000548640 ABCC4O15439 1325 aa17.72■□□□□ 0.43
TMEM106C-209ENST00000548640 TSPYL4Q9UJ04 414 aa17.71■□□□□ 0.43
TMEM106C-209ENST00000548640 NOP58Q9Y2X3 529 aaKnown RBP17.71■□□□□ 0.43
TMEM106C-209ENST00000548640 LRRC37A3O60309 1634 aa17.71■□□□□ 0.43
TMEM106C-209ENST00000548640 USP19O94966 1318 aa17.71■□□□□ 0.42
TMEM106C-209ENST00000548640 PTPRCP08575 1304 aa17.71■□□□□ 0.42
TMEM106C-209ENST00000548640 ELL2O00472 640 aaPredicted RBP17.7■□□□□ 0.42
TMEM106C-209ENST00000548640 KRT28Q7Z3Y7 464 aa17.7■□□□□ 0.42
TMEM106C-209ENST00000548640 LTV1Q96GA3 475 aaPredicted RBP17.7■□□□□ 0.42
TMEM106C-209ENST00000548640 ORAI2Q96SN7 254 aa17.7■□□□□ 0.42
TMEM106C-209ENST00000548640 PDZRN3Q9UPQ7 1066 aa17.7■□□□□ 0.42
TMEM106C-209ENST00000548640 TRPM3Q9HCF6 1732 aaPredicted RBP17.69■□□□□ 0.42
TMEM106C-209ENST00000548640 MSH5O43196 834 aa17.69■□□□□ 0.42
TMEM106C-209ENST00000548640 NPM2Q86SE8 214 aaKnown RBP17.69■□□□□ 0.42
TMEM106C-209ENST00000548640 CHMP4AQ9BY43 222 aa17.69■□□□□ 0.42
TMEM106C-209ENST00000548640 ZBTB47Q9UFB7 747 aaPredicted RBP17.69■□□□□ 0.42
TMEM106C-209ENST00000548640 FOXO3O43524 673 aa17.68■□□□□ 0.42
TMEM106C-209ENST00000548640 TMEM94Q12767 1356 aa17.67■□□□□ 0.42
TMEM106C-209ENST00000548640 GCP02774 474 aa17.67■□□□□ 0.42
TMEM106C-209ENST00000548640 CADPS2Q86UW7 1296 aa17.67■□□□□ 0.42
TMEM106C-209ENST00000548640 SKAP1Q86WV1 359 aa17.67■□□□□ 0.42
TMEM106C-209ENST00000548640 C8orf34Q49A92 452 aa17.66■□□□□ 0.42
TMEM106C-209ENST00000548640 ARHGEF25Q86VW2 580 aa17.66■□□□□ 0.42
TMEM106C-209ENST00000548640 MSH6P52701 1360 aa17.66■□□□□ 0.42
TMEM106C-209ENST00000548640 ZBTB7CA1YPR0 619 aa17.65■□□□□ 0.42
TMEM106C-209ENST00000548640 AMOTQ4VCS5 1084 aa17.65■□□□□ 0.42
TMEM106C-209ENST00000548640 LMOD2Q6P5Q4 547 aa17.65■□□□□ 0.42
TMEM106C-209ENST00000548640 SMC5Q8IY18 1101 aa17.65■□□□□ 0.42
TMEM106C-209ENST00000548640 STK31Q9BXU1 1019 aa17.65■□□□□ 0.42
TMEM106C-209ENST00000548640 VIRMAQ69YN4 1812 aaKnown RBP17.65■□□□□ 0.42
TMEM106C-209ENST00000548640 ZBTB7BO15156 539 aaPredicted RBP17.64■□□□□ 0.41
TMEM106C-209ENST00000548640 PLEKHO1Q53GL0 409 aaPredicted RBP17.64■□□□□ 0.41
TMEM106C-209ENST00000548640 INTS3Q68E01 1043 aaKnown RBP17.64■□□□□ 0.41
TMEM106C-209ENST00000548640 GCC1Q96CN9 775 aa17.64■□□□□ 0.41
TMEM106C-209ENST00000548640 NPHP3Q7Z494 1330 aa17.64■□□□□ 0.41
TMEM106C-209ENST00000548640 NCAPD2Q15021 1401 aa17.64■□□□□ 0.41
TMEM106C-209ENST00000548640 TAF7Q15545 349 aaPredicted RBP17.63■□□□□ 0.41
TMEM106C-209ENST00000548640 CCDC30Q5VVM6 783 aa17.62■□□□□ 0.41
TMEM106C-209ENST00000548640 UPF2Q9HAU5 1272 aaKnown RBP17.62■□□□□ 0.41
TMEM106C-209ENST00000548640 ALS2Q96Q42 1657 aa17.61■□□□□ 0.41
TMEM106C-209ENST00000548640 OVOS2A0A0G2JMS6 1433 aa17.61■□□□□ 0.41
TMEM106C-209ENST00000548640 ABCC6O95255 1503 aa17.61■□□□□ 0.41
TMEM106C-209ENST00000548640 XPCQ01831 940 aaPredicted RBP17.6■□□□□ 0.41
TMEM106C-209ENST00000548640 AKAP4Q5JQC9 854 aa17.6■□□□□ 0.41
TMEM106C-209ENST00000548640 NBPF6Q5VWK0 638 aa17.6■□□□□ 0.41
TMEM106C-209ENST00000548640 ANKRD24Q8TF21 1146 aa17.6■□□□□ 0.41
TMEM106C-209ENST00000548640 NBPF4Q96M43 638 aa17.6■□□□□ 0.41
TMEM106C-209ENST00000548640 CAMTA1Q9Y6Y1 1673 aa17.6■□□□□ 0.41
TMEM106C-209ENST00000548640 LMTK3Q96Q04 1460 aa17.59■□□□□ 0.41
TMEM106C-209ENST00000548640 PLEKHG2Q9H7P9 1386 aa17.59■□□□□ 0.41
TMEM106C-209ENST00000548640 CCT4P50991 539 aaKnown RBP17.59■□□□□ 0.41
TMEM106C-209ENST00000548640 C1orf141Q5JVX7 400 aa17.59■□□□□ 0.41
TMEM106C-209ENST00000548640 USHBP1Q8N6Y0 703 aa17.59■□□□□ 0.41
TMEM106C-209ENST00000548640 DAXXQ9UER7 740 aaPredicted RBP17.59■□□□□ 0.41
TMEM106C-209ENST00000548640 LMO7Q8WWI1 1683 aa17.58■□□□□ 0.41
TMEM106C-209ENST00000548640 TNS3Q68CZ2 1445 aa17.58■□□□□ 0.41
TMEM106C-209ENST00000548640 CEMIPQ8WUJ3 1361 aa17.58■□□□□ 0.4
TMEM106C-209ENST00000548640 SLC4A2P04920 1241 aa17.58■□□□□ 0.4
TMEM106C-209ENST00000548640 NUCB1Q02818 461 aa17.58■□□□□ 0.4
TMEM106C-209ENST00000548640 ZNF530Q6P9A1 599 aaPredicted RBP17.58■□□□□ 0.4
TMEM106C-209ENST00000548640 STRCP1A6NGW2 1772 aa17.58■□□□□ 0.4
TMEM106C-209ENST00000548640 HOXB7P09629 217 aa17.57■□□□□ 0.4
TMEM106C-209ENST00000548640 KRT24Q2M2I5 525 aa17.57■□□□□ 0.4
TMEM106C-209ENST00000548640 IL17REQ8NFR9 667 aa17.57■□□□□ 0.4
TMEM106C-209ENST00000548640 MED1Q15648 1581 aaPredicted RBP17.57■□□□□ 0.4
TMEM106C-209ENST00000548640 RGS12O14924 1447 aa17.56■□□□□ 0.4
TMEM106C-209ENST00000548640 TEFQ10587 303 aa17.56■□□□□ 0.4
TMEM106C-209ENST00000548640 MIS18AQ9NYP9 233 aa17.56■□□□□ 0.4
TMEM106C-209ENST00000548640 EIF5BO60841 1220 aaKnown RBP17.55■□□□□ 0.4
TMEM106C-209ENST00000548640 CHD1LQ86WJ1 897 aa17.55■□□□□ 0.4
TMEM106C-209ENST00000548640 RPAP2Q8IXW5 612 aaPredicted RBP17.55■□□□□ 0.4
TMEM106C-209ENST00000548640 FAM208AQ9UK61 1670 aaKnown RBP17.55■□□□□ 0.4
TMEM106C-209ENST00000548640 PXDNLA1KZ92 1463 aa17.53■□□□□ 0.4
TMEM106C-209ENST00000548640 HMMRO75330 724 aa17.53■□□□□ 0.4
TMEM106C-209ENST00000548640 HSPA2P54652 639 aa17.53■□□□□ 0.4
TMEM106C-209ENST00000548640 LRRC59Q96AG4 307 aaKnown RBP17.53■□□□□ 0.4
TMEM106C-209ENST00000548640 CACNA1FO60840 1977 aa17.52■□□□□ 0.4
TMEM106C-209ENST00000548640 ANKRD44Q8N8A2 993 aa17.52■□□□□ 0.4
TMEM106C-209ENST00000548640 ERBB3P21860 1342 aa17.51■□□□□ 0.39
TMEM106C-209ENST00000548640 PXDNQ92626 1479 aa17.51■□□□□ 0.39
TMEM106C-209ENST00000548640 RAPGEF4Q8WZA2 1011 aa17.51■□□□□ 0.39
TMEM106C-209ENST00000548640 C1orf115Q9H7X2 142 aa17.51■□□□□ 0.39
TMEM106C-209ENST00000548640 SPATA31A3Q5VYP0 1347 aa17.5■□□□□ 0.39
TMEM106C-209ENST00000548640 RNMTO43148 476 aaKnown RBP17.5■□□□□ 0.39
TMEM106C-209ENST00000548640 GNAI3P08754 354 aa17.5■□□□□ 0.39
TMEM106C-209ENST00000548640 FLIIQ13045 1269 aa17.5■□□□□ 0.39
TMEM106C-209ENST00000548640 HDGFL1Q5TGJ6 251 aa17.5■□□□□ 0.39
TMEM106C-209ENST00000548640 ANKRD45Q5TZF3 282 aa17.5■□□□□ 0.39
TMEM106C-209ENST00000548640 RGPD2P0DJD1 1756 aa17.5■□□□□ 0.39
TMEM106C-209ENST00000548640 KDM3BQ7LBC6 1761 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms