RNA–Protein interactions for RNA: ENST00000548516.5

LETMD1-217, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-217ENST00000548516 USHBP1Q8N6Y0 703 aa13.17□□□□□ -0.3
LETMD1-217ENST00000548516 BTAF1O14981 1849 aa13.17□□□□□ -0.3
LETMD1-217ENST00000548516 COL23A1Q86Y22 540 aaPredicted RBP13.16□□□□□ -0.3
LETMD1-217ENST00000548516 ANKRD36BQ8N2N9 1353 aa13.16□□□□□ -0.3
LETMD1-217ENST00000548516 MON2Q7Z3U7 1717 aa13.16□□□□□ -0.3
LETMD1-217ENST00000548516 PAPPAQ13219 1627 aa13.15□□□□□ -0.3
LETMD1-217ENST00000548516 RRS1Q15050 365 aaKnown RBP13.15□□□□□ -0.3
LETMD1-217ENST00000548516 ST20-MTHFSA0A0A6YYL1 179 aa13.14□□□□□ -0.31
LETMD1-217ENST00000548516 GRIN3BO60391 1043 aa13.14□□□□□ -0.31
LETMD1-217ENST00000548516 YBX3P16989 372 aaKnown RBP eCLIP13.14□□□□□ -0.315e-13■■□□□ 14.4
LETMD1-217ENST00000548516 NBPF6Q5VWK0 638 aa13.14□□□□□ -0.31
LETMD1-217ENST00000548516 RAPGEF4Q8WZA2 1011 aa13.14□□□□□ -0.31
LETMD1-217ENST00000548516 NBPF4Q96M43 638 aa13.14□□□□□ -0.31
LETMD1-217ENST00000548516 USP47Q96K76 1375 aa13.14□□□□□ -0.31
LETMD1-217ENST00000548516 LTN1O94822 1766 aa13.13□□□□□ -0.31
LETMD1-217ENST00000548516 PUS7Q96PZ0 661 aaKnown RBP13.13□□□□□ -0.31
LETMD1-217ENST00000548516 GGNBP2Q9H3C7 697 aa13.13□□□□□ -0.31
LETMD1-217ENST00000548516 CHD4Q14839 1912 aa13.12□□□□□ -0.31
LETMD1-217ENST00000548516 TATP17735 454 aaPredicted RBP13.12□□□□□ -0.31
LETMD1-217ENST00000548516 MPRIPQ6WCQ1 1025 aa13.12□□□□□ -0.31
LETMD1-217ENST00000548516 NSD2O96028 1365 aa13.11□□□□□ -0.31
LETMD1-217ENST00000548516 WWC3Q9ULE0 1092 aa13.11□□□□□ -0.31
LETMD1-217ENST00000548516 MEGF6O75095 1541 aa13.1□□□□□ -0.31
LETMD1-217ENST00000548516 USP54Q70EL1 1684 aa13.1□□□□□ -0.31
LETMD1-217ENST00000548516 TESK2Q96S53 571 aa13.1□□□□□ -0.31
LETMD1-217ENST00000548516 FYB1O15117 783 aa13.09□□□□□ -0.31
LETMD1-217ENST00000548516 HSP90AB2PQ58FF8 381 aa13.09□□□□□ -0.31
LETMD1-217ENST00000548516 ZNF526Q8TF50 670 aaPredicted RBP13.09□□□□□ -0.31
LETMD1-217ENST00000548516 PHF14O94880 888 aa13.08□□□□□ -0.32
LETMD1-217ENST00000548516 SMIM5Q71RC9 77 aa13.08□□□□□ -0.32
LETMD1-217ENST00000548516 SLC24A1O60721 1099 aa13.07□□□□□ -0.32
LETMD1-217ENST00000548516 FLAD1Q8NFF5 587 aa13.07□□□□□ -0.32
LETMD1-217ENST00000548516 AK7Q96M32 723 aa13.07□□□□□ -0.32
LETMD1-217ENST00000548516 GPBP1L1Q9HC44 474 aaPredicted RBP13.07□□□□□ -0.32
LETMD1-217ENST00000548516 CGNL1Q0VF96 1302 aa13.07□□□□□ -0.32
LETMD1-217ENST00000548516 PALLDQ8WX93 1383 aa13.07□□□□□ -0.32
LETMD1-217ENST00000548516 SMG6Q86US8 1419 aaKnown RBP13.06□□□□□ -0.32
LETMD1-217ENST00000548516 GOLGB1Q14789 3259 aaKnown RBP13.06□□□□□ -0.32
LETMD1-217ENST00000548516 PPM1GO15355 546 aaPredicted RBP13.06□□□□□ -0.32
LETMD1-217ENST00000548516 TMF1P82094 1093 aa13.06□□□□□ -0.32
LETMD1-217ENST00000548516 CD2APQ9Y5K6 639 aa13.06□□□□□ -0.32
LETMD1-217ENST00000548516 PCDH11XQ9BZA7 1347 aa13.06□□□□□ -0.32
LETMD1-217ENST00000548516 PCDH11YQ9BZA8 1340 aa13.06□□□□□ -0.32
LETMD1-217ENST00000548516 ATP10DQ9P241 1426 aa13.05□□□□□ -0.32
LETMD1-217ENST00000548516 CYP27B1O15528 508 aa13.05□□□□□ -0.32
LETMD1-217ENST00000548516 FAM208AQ9UK61 1670 aaKnown RBP13.05□□□□□ -0.32
LETMD1-217ENST00000548516 RTL1A6NKG5 1358 aa13.05□□□□□ -0.32
LETMD1-217ENST00000548516 DOT1LQ8TEK3 1739 aa13.05□□□□□ -0.32
LETMD1-217ENST00000548516 HMGB2P26583 209 aaKnown RBP13.04□□□□□ -0.32
LETMD1-217ENST00000548516 SMARCC1Q92922 1105 aaPredicted RBP13.04□□□□□ -0.32
LETMD1-217ENST00000548516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.03□□□□□ -0.32
LETMD1-217ENST00000548516 IFFO2Q5TF58 517 aa13.03□□□□□ -0.32
LETMD1-217ENST00000548516 AMIGO3Q86WK7 504 aa13.03□□□□□ -0.32
LETMD1-217ENST00000548516 PIGBQ92521 554 aa13.03□□□□□ -0.32
LETMD1-217ENST00000548516 RGPD2P0DJD1 1756 aa13.02□□□□□ -0.32
LETMD1-217ENST00000548516 EMILIN1Q9Y6C2 1016 aa13.02□□□□□ -0.33
LETMD1-217ENST00000548516 IGSF1Q8N6C5 1336 aa13.02□□□□□ -0.33
LETMD1-217ENST00000548516 INSRP06213 1382 aa13.02□□□□□ -0.33
LETMD1-217ENST00000548516 QSER1Q2KHR3 1735 aa13.02□□□□□ -0.33
LETMD1-217ENST00000548516 TUBGCP6Q96RT7 1819 aa13.02□□□□□ -0.33
LETMD1-217ENST00000548516 SPG7Q9UQ90 795 aa13.01□□□□□ -0.33
LETMD1-217ENST00000548516 LY75O60449 1722 aa13.01□□□□□ -0.33
LETMD1-217ENST00000548516 SHANK3Q9BYB0 1731 aa13.01□□□□□ -0.33
LETMD1-217ENST00000548516 FLT4P35916 1363 aa13□□□□□ -0.33
LETMD1-217ENST00000548516 LOC102724428A0A0B4J2F2 783 aa12.99□□□□□ -0.33
LETMD1-217ENST00000548516 GNPATO15228 680 aa12.99□□□□□ -0.33
LETMD1-217ENST00000548516 ATP6V1AP38606 617 aa12.99□□□□□ -0.33
LETMD1-217ENST00000548516 SIK1P57059 783 aa12.99□□□□□ -0.33
LETMD1-217ENST00000548516 CDCA8Q53HL2 280 aa12.99□□□□□ -0.33
LETMD1-217ENST00000548516 LINC00116Q8NCU8 138 aa12.99□□□□□ -0.33
LETMD1-217ENST00000548516 TMOD3Q9NYL9 352 aa12.99□□□□□ -0.33
LETMD1-217ENST00000548516 HSPA6P17066 643 aa12.98□□□□□ -0.33
LETMD1-217ENST00000548516 POLR3GLQ9BT43 218 aa12.98□□□□□ -0.33
LETMD1-217ENST00000548516 CARD14Q9BXL6 1004 aa12.98□□□□□ -0.33
LETMD1-217ENST00000548516 ASAP1Q9ULH1 1129 aa12.98□□□□□ -0.33
LETMD1-217ENST00000548516 COL24A1Q17RW2 1714 aa12.98□□□□□ -0.33
LETMD1-217ENST00000548516 SSFA2P28290 1259 aa12.97□□□□□ -0.33
LETMD1-217ENST00000548516 ITPK1Q13572 414 aa12.97□□□□□ -0.33
LETMD1-217ENST00000548516 EYA1Q99502 592 aa12.97□□□□□ -0.33
LETMD1-217ENST00000548516 MMP10P09238 476 aa12.96□□□□□ -0.33
LETMD1-217ENST00000548516 TNNT2P45379 298 aaPredicted RBP12.96□□□□□ -0.33
LETMD1-217ENST00000548516 NKX1-1Q15270 411 aaPredicted RBP12.96□□□□□ -0.33
LETMD1-217ENST00000548516 TRIM26Q12899 539 aaPredicted RBP12.95□□□□□ -0.34
LETMD1-217ENST00000548516 IFNL2Q8IZJ0 200 aa12.95□□□□□ -0.34
LETMD1-217ENST00000548516 RBM42Q9BTD8 480 aaKnown RBP12.95□□□□□ -0.34
LETMD1-217ENST00000548516 BCS1LQ9Y276 419 aa12.95□□□□□ -0.34
LETMD1-217ENST00000548516 CEP350Q5VT06 3117 aa12.95□□□□□ -0.34
LETMD1-217ENST00000548516 NSD3Q9BZ95 1437 aa12.95□□□□□ -0.34
LETMD1-217ENST00000548516 KIF24Q5T7B8 1368 aa12.94□□□□□ -0.34
LETMD1-217ENST00000548516 C5P01031 1676 aa12.94□□□□□ -0.34
LETMD1-217ENST00000548516 A0A0G2JLW4 131 aa12.94□□□□□ -0.34
LETMD1-217ENST00000548516 PHKG2P15735 406 aa12.94□□□□□ -0.34
LETMD1-217ENST00000548516 TRAPPC3LQ5T215 181 aa12.94□□□□□ -0.34
LETMD1-217ENST00000548516 ARHGAP27Q6ZUM4 889 aa12.94□□□□□ -0.34
LETMD1-217ENST00000548516 ATG3Q9NT62 314 aa12.94□□□□□ -0.34
LETMD1-217ENST00000548516 ADCY9O60503 1353 aa12.94□□□□□ -0.34
LETMD1-217ENST00000548516 WASHC2AQ641Q2 1341 aa12.93□□□□□ -0.34
LETMD1-217ENST00000548516 KIF20BQ96Q89 1820 aa12.93□□□□□ -0.34
LETMD1-217ENST00000548516 RTCBQ9Y3I0 505 aaKnown RBP12.93□□□□□ -0.34
LETMD1-217ENST00000548516 C4BP0C0L5 1744 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms