RNA–Protein interactions for RNA: ENST00000548346.1

NPIPB12-203, Transcript of nuclear pore complex interacting protein family, member B12, humanhuman

TSL 2

Gene NPIPB12, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB12-203ENST00000548346 ZNF697Q5TEC3 545 aa8.05□□□□□ -1.12
NPIPB12-203ENST00000548346 KRI1Q8N9T8 703 aaKnown RBP8.05□□□□□ -1.12
NPIPB12-203ENST00000548346 ARHGAP23Q9P227 1491 aa8.05□□□□□ -1.12
NPIPB12-203ENST00000548346 MBD5Q9P267 1494 aa8.05□□□□□ -1.12
NPIPB12-203ENST00000548346 CEP162Q5TB80 1403 aa8.04□□□□□ -1.12
NPIPB12-203ENST00000548346 MAP3K1Q13233 1512 aa8.04□□□□□ -1.12
NPIPB12-203ENST00000548346 SSTR3P32745 418 aaPredicted RBP8.04□□□□□ -1.12
NPIPB12-203ENST00000548346 ZNF772Q68DY9 489 aaPredicted RBP8.04□□□□□ -1.12
NPIPB12-203ENST00000548346 SYMPKQ92797 1274 aaKnown RBP8.04□□□□□ -1.12
NPIPB12-203ENST00000548346 PKD2L1Q9P0L9 805 aa8.04□□□□□ -1.12
NPIPB12-203ENST00000548346 WASHC2CQ9Y4E1 1318 aa8.03□□□□□ -1.12
NPIPB12-203ENST00000548346 SLIT1O75093 1534 aa8.03□□□□□ -1.12
NPIPB12-203ENST00000548346 LRP6O75581 1613 aa8.03□□□□□ -1.12
NPIPB12-203ENST00000548346 TMEM94Q12767 1356 aa8.03□□□□□ -1.12
NPIPB12-203ENST00000548346 TNFRSF10AO00220 468 aa8.03□□□□□ -1.12
NPIPB12-203ENST00000548346 MMP16P51512 607 aa8.03□□□□□ -1.12
NPIPB12-203ENST00000548346 USP46P62068 366 aa8.03□□□□□ -1.12
NPIPB12-203ENST00000548346 TRAF7Q6Q0C0 670 aa8.03□□□□□ -1.12
NPIPB12-203ENST00000548346 GIGYF2Q6Y7W6 1299 aaKnown RBP8.03□□□□□ -1.12
NPIPB12-203ENST00000548346 CFDP1Q9UEE9 299 aaPredicted RBP8.03□□□□□ -1.12
NPIPB12-203ENST00000548346 PCDHGC3Q9UN70 934 aa8.03□□□□□ -1.12
NPIPB12-203ENST00000548346 SPATA31A6Q5VVP1 1343 aa8.03□□□□□ -1.12
NPIPB12-203ENST00000548346 NCOA2Q15596 1464 aa8.02□□□□□ -1.13
NPIPB12-203ENST00000548346 TRIM66O15016 1216 aa8.02□□□□□ -1.13
NPIPB12-203ENST00000548346 KIF3BO15066 747 aa8.02□□□□□ -1.13
NPIPB12-203ENST00000548346 PRR20EP86478 221 aa8.02□□□□□ -1.13
NPIPB12-203ENST00000548346 PRR20CP86479 221 aa8.02□□□□□ -1.13
NPIPB12-203ENST00000548346 PRR20DP86480 221 aa8.02□□□□□ -1.13
NPIPB12-203ENST00000548346 PRR20BP86481 221 aa8.02□□□□□ -1.13
NPIPB12-203ENST00000548346 PRR20AP86496 221 aa8.02□□□□□ -1.13
NPIPB12-203ENST00000548346 GRIPAP1Q4V328 841 aa8.02□□□□□ -1.13
NPIPB12-203ENST00000548346 PARP9Q8IXQ6 854 aa8.02□□□□□ -1.13
NPIPB12-203ENST00000548346 FGD6Q6ZV73 1430 aa8.02□□□□□ -1.13
NPIPB12-203ENST00000548346 ERVK-7P63135 1459 aa8.01□□□□□ -1.13
NPIPB12-203ENST00000548346 DXOO77932 396 aaKnown RBP8.01□□□□□ -1.13
NPIPB12-203ENST00000548346 LTKP29376 864 aa8.01□□□□□ -1.13
NPIPB12-203ENST00000548346 TTLL12Q14166 644 aaPredicted RBP8.01□□□□□ -1.13
NPIPB12-203ENST00000548346 Q3C1V9 767 aa8.01□□□□□ -1.13
NPIPB12-203ENST00000548346 SPIRE2Q8WWL2 714 aa8.01□□□□□ -1.13
NPIPB12-203ENST00000548346 TRIM52Q96A61 297 aa8.01□□□□□ -1.13
NPIPB12-203ENST00000548346 USB1Q9BQ65 265 aaKnown RBP8.01□□□□□ -1.13
NPIPB12-203ENST00000548346 CAMSAP2Q08AD1 1489 aa8□□□□□ -1.13
NPIPB12-203ENST00000548346 FYCO1Q9BQS8 1478 aa8□□□□□ -1.13
NPIPB12-203ENST00000548346 COL16A1Q07092 1604 aaPredicted RBP8□□□□□ -1.13
NPIPB12-203ENST00000548346 RXRBP28702 533 aa8□□□□□ -1.13
NPIPB12-203ENST00000548346 UBR1Q8IWV7 1749 aa8□□□□□ -1.13
NPIPB12-203ENST00000548346 NKTRP30414 1462 aaKnown RBP8□□□□□ -1.13
NPIPB12-203ENST00000548346 CCNB3Q8WWL7 1395 aa7.99□□□□□ -1.13
NPIPB12-203ENST00000548346 ABCC3O15438 1527 aa7.99□□□□□ -1.13
NPIPB12-203ENST00000548346 PRDM15P57071 1507 aaPredicted RBP7.99□□□□□ -1.13
NPIPB12-203ENST00000548346 PHLPP1O60346 1717 aa7.99□□□□□ -1.13
NPIPB12-203ENST00000548346 MS4A1P11836 297 aa7.99□□□□□ -1.13
NPIPB12-203ENST00000548346 KCNA6P17658 529 aa7.99□□□□□ -1.13
NPIPB12-203ENST00000548346 NDUFV2P19404 249 aa7.99□□□□□ -1.13
NPIPB12-203ENST00000548346 RPIAP49247 311 aa7.99□□□□□ -1.13
NPIPB12-203ENST00000548346 TIAM1Q13009 1591 aa7.98□□□□□ -1.13
NPIPB12-203ENST00000548346 MOXD2PA6NHM9 499 aa7.98□□□□□ -1.13
NPIPB12-203ENST00000548346 TXNDC2Q86VQ3 553 aa7.98□□□□□ -1.13
NPIPB12-203ENST00000548346 ZNF644Q9H582 1327 aaPredicted RBP7.98□□□□□ -1.13
NPIPB12-203ENST00000548346 NWD1Q149M9 1564 aa7.97□□□□□ -1.13
NPIPB12-203ENST00000548346 UBTFP17480 764 aaKnown RBP7.97□□□□□ -1.13
NPIPB12-203ENST00000548346 FOXC1Q12948 553 aa7.97□□□□□ -1.13
NPIPB12-203ENST00000548346 NUTM1Q86Y26 1132 aa7.97□□□□□ -1.13
NPIPB12-203ENST00000548346 SLAIN2Q9P270 581 aa7.97□□□□□ -1.13
NPIPB12-203ENST00000548346 CCDC141Q6ZP82 1450 aa7.97□□□□□ -1.13
NPIPB12-203ENST00000548346 MSH6P52701 1360 aa7.97□□□□□ -1.13
NPIPB12-203ENST00000548346 TMEM2Q9UHN6 1383 aa7.97□□□□□ -1.13
NPIPB12-203ENST00000548346 RGS12O14924 1447 aa7.96□□□□□ -1.13
NPIPB12-203ENST00000548346 SHPRHQ149N8 1683 aa7.96□□□□□ -1.13
NPIPB12-203ENST00000548346 FDX1P10109 184 aa7.96□□□□□ -1.14
NPIPB12-203ENST00000548346 MYT1Q01538 1121 aa7.96□□□□□ -1.14
NPIPB12-203ENST00000548346 MEX3CQ5U5Q3 659 aaKnown RBP7.96□□□□□ -1.14
NPIPB12-203ENST00000548346 AK7Q96M32 723 aa7.96□□□□□ -1.14
NPIPB12-203ENST00000548346 BEGAINQ9BUH8 593 aa7.96□□□□□ -1.14
NPIPB12-203ENST00000548346 EID1Q9Y6B2 187 aa7.96□□□□□ -1.14
NPIPB12-203ENST00000548346 AHDC1Q5TGY3 1603 aaPredicted RBP7.96□□□□□ -1.14
NPIPB12-203ENST00000548346 TET3O43151 1660 aa7.95□□□□□ -1.14
NPIPB12-203ENST00000548346 PROSER2Q86WR7 435 aaPredicted RBP7.95□□□□□ -1.14
NPIPB12-203ENST00000548346 SLC24A3Q9HC58 644 aa7.95□□□□□ -1.14
NPIPB12-203ENST00000548346 EP400Q96L91 3159 aa7.95□□□□□ -1.14
NPIPB12-203ENST00000548346 ARHGAP31Q2M1Z3 1444 aa7.95□□□□□ -1.14
NPIPB12-203ENST00000548346 TRIM32Q13049 653 aa7.94□□□□□ -1.14
NPIPB12-203ENST00000548346 TOR4AQ9NXH8 423 aa7.94□□□□□ -1.14
NPIPB12-203ENST00000548346 NCOA3Q9Y6Q9 1424 aa7.94□□□□□ -1.14
NPIPB12-203ENST00000548346 DIP2AQ14689 1571 aa7.93□□□□□ -1.14
NPIPB12-203ENST00000548346 SETBP1Q9Y6X0 1596 aa7.93□□□□□ -1.14
NPIPB12-203ENST00000548346 MROH1Q8NDA8 1641 aa7.93□□□□□ -1.14
NPIPB12-203ENST00000548346 JUNDP17535 347 aa7.93□□□□□ -1.14
NPIPB12-203ENST00000548346 PTCRAQ6ISU1 281 aaPredicted RBP7.93□□□□□ -1.14
NPIPB12-203ENST00000548346 RETREG3Q86VR2 466 aa7.93□□□□□ -1.14
NPIPB12-203ENST00000548346 TBC1D2Q9BYX2 928 aa7.93□□□□□ -1.14
NPIPB12-203ENST00000548346 KDM5AP29375 1690 aaKnown RBP7.92□□□□□ -1.14
NPIPB12-203ENST00000548346 FAM187AA6NFU0 413 aa7.92□□□□□ -1.14
NPIPB12-203ENST00000548346 DGAT1O75907 488 aa7.92□□□□□ -1.14
NPIPB12-203ENST00000548346 CD2BP2O95400 341 aaKnown RBP7.92□□□□□ -1.14
NPIPB12-203ENST00000548346 RBM6P78332 1123 aaKnown RBP7.92□□□□□ -1.14
NPIPB12-203ENST00000548346 SKOR1P84550 965 aa7.92□□□□□ -1.14
NPIPB12-203ENST00000548346 PDE4DQ08499 809 aa7.92□□□□□ -1.14
NPIPB12-203ENST00000548346 PCDHB15Q9Y5E8 787 aa7.92□□□□□ -1.14
NPIPB12-203ENST00000548346 AFF2P51816 1311 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms