RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 LMTK3Q96Q04 1460 aa26.72■■□□□ 1.87
RITA1-201ENST00000548278 TMEM57Q8N5G2 664 aa26.72■■□□□ 1.87
RITA1-201ENST00000548278 RTF1Q92541 710 aaKnown RBP26.72■■□□□ 1.87
RITA1-201ENST00000548278 ARHGAP45Q92619 1136 aa26.72■■□□□ 1.87
RITA1-201ENST00000548278 HTATSF1O43719 755 aaKnown RBP26.71■■□□□ 1.87
RITA1-201ENST00000548278 ITPRIPQ8IWB1 547 aa26.71■■□□□ 1.87
RITA1-201ENST00000548278 KIAA0232Q92628 1395 aa26.71■■□□□ 1.87
RITA1-201ENST00000548278 ARHGEF25Q86VW2 580 aa26.7■■□□□ 1.87
RITA1-201ENST00000548278 BACH2Q9BYV9 841 aa26.7■■□□□ 1.86
RITA1-201ENST00000548278 ALS2Q96Q42 1657 aa26.7■■□□□ 1.86
RITA1-201ENST00000548278 STRCQ7RTU9 1775 aa26.69■■□□□ 1.86
RITA1-201ENST00000548278 LMOD2Q6P5Q4 547 aa26.69■■□□□ 1.86
RITA1-201ENST00000548278 LRRC37A3O60309 1634 aa26.68■■□□□ 1.86
RITA1-201ENST00000548278 USHBP1Q8N6Y0 703 aa26.68■■□□□ 1.86
RITA1-201ENST00000548278 NBPF6Q5VWK0 638 aa26.67■■□□□ 1.86
RITA1-201ENST00000548278 CADPS2Q86UW7 1296 aa26.67■■□□□ 1.86
RITA1-201ENST00000548278 NBPF4Q96M43 638 aa26.67■■□□□ 1.86
RITA1-201ENST00000548278 MSH6P52701 1360 aa26.67■■□□□ 1.86
RITA1-201ENST00000548278 ZBTB7CA1YPR0 619 aa26.66■■□□□ 1.86
RITA1-201ENST00000548278 GNAT3A8MTJ3 354 aa26.66■■□□□ 1.86
RITA1-201ENST00000548278 KRT24Q2M2I5 525 aa26.66■■□□□ 1.86
RITA1-201ENST00000548278 RGPD2P0DJD1 1756 aa26.65■■□□□ 1.86
RITA1-201ENST00000548278 XIRP1Q702N8 1843 aaKnown RBP26.65■■□□□ 1.86
RITA1-201ENST00000548278 RWDD1Q9H446 243 aaPredicted RBP26.65■■□□□ 1.86
RITA1-201ENST00000548278 HAP1P54257 671 aaPredicted RBP26.64■■□□□ 1.86
RITA1-201ENST00000548278 ZBTB40Q9NUA8 1239 aa26.64■■□□□ 1.86
RITA1-201ENST00000548278 MAP3K5Q99683 1374 aa26.64■■□□□ 1.86
RITA1-201ENST00000548278 MIS18AQ9NYP9 233 aa26.63■■□□□ 1.85
RITA1-201ENST00000548278 RGS3P49796 1198 aa26.62■■□□□ 1.85
RITA1-201ENST00000548278 MED1Q15648 1581 aaPredicted RBP26.62■■□□□ 1.85
RITA1-201ENST00000548278 ABCC4O15439 1325 aa26.62■■□□□ 1.85
RITA1-201ENST00000548278 PLEKHG5O94827 1062 aa26.62■■□□□ 1.85
RITA1-201ENST00000548278 DDX17Q92841 729 aaKnown RBP26.61■■□□□ 1.85
RITA1-201ENST00000548278 TSPYL4Q9UJ04 414 aa26.61■■□□□ 1.85
RITA1-201ENST00000548278 NCAPD2Q15021 1401 aa26.61■■□□□ 1.85
RITA1-201ENST00000548278 IL17REQ8NFR9 667 aa26.6■■□□□ 1.85
RITA1-201ENST00000548278 LRRC59Q96AG4 307 aaKnown RBP26.6■■□□□ 1.85
RITA1-201ENST00000548278 HDAC1Q13547 482 aaPredicted RBP26.59■■□□□ 1.85
RITA1-201ENST00000548278 API5Q9BZZ5 524 aaKnown RBP26.59■■□□□ 1.85
RITA1-201ENST00000548278 NPHP3Q7Z494 1330 aa26.58■■□□□ 1.85
RITA1-201ENST00000548278 MSH5O43196 834 aa26.58■■□□□ 1.84
RITA1-201ENST00000548278 ANKRD24Q8TF21 1146 aa26.57■■□□□ 1.84
RITA1-201ENST00000548278 AXIN2Q9Y2T1 843 aa26.57■■□□□ 1.84
RITA1-201ENST00000548278 CAMTA1Q9Y6Y1 1673 aa26.56■■□□□ 1.84
RITA1-201ENST00000548278 ZBTB7BO15156 539 aaPredicted RBP26.56■■□□□ 1.84
RITA1-201ENST00000548278 PXDNQ92626 1479 aa26.55■■□□□ 1.84
RITA1-201ENST00000548278 BABAM1Q9NWV8 329 aa26.54■■□□□ 1.84
RITA1-201ENST00000548278 RGPD5Q99666 1765 aa26.54■■□□□ 1.84
RITA1-201ENST00000548278 FAM161AQ3B820 660 aa26.54■■□□□ 1.84
RITA1-201ENST00000548278 PDZRN3Q9UPQ7 1066 aa26.54■■□□□ 1.84
RITA1-201ENST00000548278 TNS3Q68CZ2 1445 aa26.53■■□□□ 1.84
RITA1-201ENST00000548278 CHMP4BQ9H444 224 aaKnown RBP26.53■■□□□ 1.84
RITA1-201ENST00000548278 CEMIPQ8WUJ3 1361 aa26.53■■□□□ 1.84
RITA1-201ENST00000548278 RGS12O14924 1447 aa26.53■■□□□ 1.84
RITA1-201ENST00000548278 TAF7Q15545 349 aaPredicted RBP26.53■■□□□ 1.84
RITA1-201ENST00000548278 ZC3H6P61129 1189 aaKnown RBP26.52■■□□□ 1.84
RITA1-201ENST00000548278 C8orf34Q49A92 452 aa26.52■■□□□ 1.84
RITA1-201ENST00000548278 LMO7Q8WWI1 1683 aa26.51■■□□□ 1.83
RITA1-201ENST00000548278 ANP32AP39687 249 aaKnown RBP26.51■■□□□ 1.83
RITA1-201ENST00000548278 ZNF335Q9H4Z2 1342 aaPredicted RBP26.51■■□□□ 1.83
RITA1-201ENST00000548278 PLEKHO1Q53GL0 409 aaPredicted RBP26.5■■□□□ 1.83
RITA1-201ENST00000548278 PTPRCP08575 1304 aa26.49■■□□□ 1.83
RITA1-201ENST00000548278 SPATA31A3Q5VYP0 1347 aa26.49■■□□□ 1.83
RITA1-201ENST00000548278 AMOTQ4VCS5 1084 aa26.49■■□□□ 1.83
RITA1-201ENST00000548278 ERBB3P21860 1342 aa26.49■■□□□ 1.83
RITA1-201ENST00000548278 BRINP3Q76B58 766 aa26.48■■□□□ 1.83
RITA1-201ENST00000548278 COL18A1P39060 1754 aa26.48■■□□□ 1.83
RITA1-201ENST00000548278 CRYBG1Q9Y4K1 1723 aa26.48■■□□□ 1.83
RITA1-201ENST00000548278 SLC4A2P04920 1241 aa26.48■■□□□ 1.83
RITA1-201ENST00000548278 INTS3Q68E01 1043 aaKnown RBP26.48■■□□□ 1.83
RITA1-201ENST00000548278 SMC5Q8IY18 1101 aa26.48■■□□□ 1.83
RITA1-201ENST00000548278 AKAP4Q5JQC9 854 aa26.47■■□□□ 1.83
RITA1-201ENST00000548278 ZNF530Q6P9A1 599 aaPredicted RBP26.46■■□□□ 1.83
RITA1-201ENST00000548278 SOS1Q07889 1333 aaPredicted RBP26.46■■□□□ 1.83
RITA1-201ENST00000548278 LGR6Q9HBX8 967 aa26.46■■□□□ 1.83
RITA1-201ENST00000548278 CABLES1Q8TDN4 633 aa26.45■■□□□ 1.83
RITA1-201ENST00000548278 VIRMAQ69YN4 1812 aaKnown RBP26.42■■□□□ 1.82
RITA1-201ENST00000548278 C1orf115Q9H7X2 142 aa26.42■■□□□ 1.82
RITA1-201ENST00000548278 SLAIN2Q9P270 581 aa26.42■■□□□ 1.82
RITA1-201ENST00000548278 FAM208AQ9UK61 1670 aaKnown RBP26.42■■□□□ 1.82
RITA1-201ENST00000548278 ABCC6O95255 1503 aa26.42■■□□□ 1.82
RITA1-201ENST00000548278 G2E3Q7L622 706 aa26.42■■□□□ 1.82
RITA1-201ENST00000548278 NPM2Q86SE8 214 aaKnown RBP26.42■■□□□ 1.82
RITA1-201ENST00000548278 IPO9Q96P70 1041 aaKnown RBP26.42■■□□□ 1.82
RITA1-201ENST00000548278 KDM3BQ7LBC6 1761 aa26.41■■□□□ 1.82
RITA1-201ENST00000548278 CACNA1FO60840 1977 aa26.41■■□□□ 1.82
RITA1-201ENST00000548278 CCDC30Q5VVM6 783 aa26.4■■□□□ 1.82
RITA1-201ENST00000548278 STK31Q9BXU1 1019 aa26.4■■□□□ 1.82
RITA1-201ENST00000548278 CPDO75976 1380 aa26.39■■□□□ 1.82
RITA1-201ENST00000548278 C1orf141Q5JVX7 400 aa26.39■■□□□ 1.82
RITA1-201ENST00000548278 MPRIPQ6WCQ1 1025 aa26.39■■□□□ 1.82
RITA1-201ENST00000548278 OVOS2A0A0G2JMS6 1433 aa26.39■■□□□ 1.82
RITA1-201ENST00000548278 SIRT2Q8IXJ6 389 aa26.38■■□□□ 1.81
RITA1-201ENST00000548278 RNMTO43148 476 aaKnown RBP26.38■■□□□ 1.81
RITA1-201ENST00000548278 SOS2Q07890 1332 aaPredicted RBP26.38■■□□□ 1.81
RITA1-201ENST00000548278 NLRP2Q9NX02 1062 aa26.37■■□□□ 1.81
RITA1-201ENST00000548278 EIF4A1P60842 406 aaKnown RBP26.36■■□□□ 1.81
RITA1-201ENST00000548278 NUCB1Q02818 461 aa26.36■■□□□ 1.81
RITA1-201ENST00000548278 TEFQ10587 303 aa26.36■■□□□ 1.81
RITA1-201ENST00000548278 CHRNA2Q15822 529 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms