RNA–Protein interactions for RNA: ENST00000548220.1

PTPRR-207, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,374 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-207ENST00000548220 POLR3GLQ9BT43 218 aa8.46□□□□□ -1.06
PTPRR-207ENST00000548220 ARHGEF10O15013 1369 aa8.45□□□□□ -1.06
PTPRR-207ENST00000548220 KIF24Q5T7B8 1368 aa8.45□□□□□ -1.06
PTPRR-207ENST00000548220 PARD3Q8TEW0 1356 aa8.45□□□□□ -1.06
PTPRR-207ENST00000548220 ALS2Q96Q42 1657 aa8.45□□□□□ -1.06
PTPRR-207ENST00000548220 PXDNQ92626 1479 aa8.45□□□□□ -1.06
PTPRR-207ENST00000548220 C2orf72A6NCS6 295 aa8.45□□□□□ -1.06
PTPRR-207ENST00000548220 ANP32CO43423 234 aa8.45□□□□□ -1.06
PTPRR-207ENST00000548220 FOXO3O43524 673 aa8.45□□□□□ -1.06
PTPRR-207ENST00000548220 LSM11P83369 360 aaKnown RBP eCLIP8.45□□□□□ -1.06
PTPRR-207ENST00000548220 KRT28Q7Z3Y7 464 aa8.45□□□□□ -1.06
PTPRR-207ENST00000548220 KHSRPQ92945 711 aaKnown RBP eCLIP8.45□□□□□ -1.06
PTPRR-207ENST00000548220 LRRC59Q96AG4 307 aaKnown RBP8.45□□□□□ -1.06
PTPRR-207ENST00000548220 PRKRIP1Q9H875 184 aaPredicted RBP8.45□□□□□ -1.06
PTPRR-207ENST00000548220 NSD3Q9BZ95 1437 aa8.45□□□□□ -1.06
PTPRR-207ENST00000548220 AATKQ6ZMQ8 1374 aa8.44□□□□□ -1.06
PTPRR-207ENST00000548220 ROBO1Q9Y6N7 1651 aa8.44□□□□□ -1.06
PTPRR-207ENST00000548220 SLC34A2O95436 690 aa8.44□□□□□ -1.06
PTPRR-207ENST00000548220 NLRP13Q86W25 1043 aa8.44□□□□□ -1.06
PTPRR-207ENST00000548220 PMFBP1Q8TBY8 1022 aa8.44□□□□□ -1.06
PTPRR-207ENST00000548220 TMC2Q8TDI7 906 aa8.44□□□□□ -1.06
PTPRR-207ENST00000548220 SPATA31A3Q5VYP0 1347 aa8.43□□□□□ -1.06
PTPRR-207ENST00000548220 NUTM2FA1L443 756 aa8.43□□□□□ -1.06
PTPRR-207ENST00000548220 CCER2I3L3R5 266 aa8.43□□□□□ -1.06
PTPRR-207ENST00000548220 KCNH5Q8NCM2 988 aa8.43□□□□□ -1.06
PTPRR-207ENST00000548220 COG3Q96JB2 828 aa8.43□□□□□ -1.06
PTPRR-207ENST00000548220 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.43□□□□□ -1.06
PTPRR-207ENST00000548220 PHRF1Q9P1Y6 1649 aaKnown RBP8.43□□□□□ -1.06
PTPRR-207ENST00000548220 MED1Q15648 1581 aaPredicted RBP8.42□□□□□ -1.06
PTPRR-207ENST00000548220 TNS3Q68CZ2 1445 aa8.42□□□□□ -1.06
PTPRR-207ENST00000548220 NUDT7P0C024 238 aa8.42□□□□□ -1.06
PTPRR-207ENST00000548220 HSPA1LP34931 641 aa8.42□□□□□ -1.06
PTPRR-207ENST00000548220 ABTB2Q8N961 1025 aa8.42□□□□□ -1.06
PTPRR-207ENST00000548220 BBXQ8WY36 941 aaPredicted RBP8.42□□□□□ -1.06
PTPRR-207ENST00000548220 INSRP06213 1382 aa8.42□□□□□ -1.06
PTPRR-207ENST00000548220 MAP2P11137 1827 aaKnown RBP8.42□□□□□ -1.06
PTPRR-207ENST00000548220 USP19O94966 1318 aa8.41□□□□□ -1.06
PTPRR-207ENST00000548220 PIK3C2AO00443 1686 aa8.41□□□□□ -1.06
PTPRR-207ENST00000548220 OVOS2A0A0J9YW53 1432 aa8.41□□□□□ -1.06
PTPRR-207ENST00000548220 OVOS2Q6IE36 1432 aa8.41□□□□□ -1.06
PTPRR-207ENST00000548220 ABCC6O95255 1503 aa8.41□□□□□ -1.06
PTPRR-207ENST00000548220 COL22A1Q8NFW1 1626 aaPredicted RBP8.41□□□□□ -1.06
PTPRR-207ENST00000548220 RGL2O15211 777 aa8.41□□□□□ -1.06
PTPRR-207ENST00000548220 MORC1Q86VD1 984 aa8.41□□□□□ -1.06
PTPRR-207ENST00000548220 DDX17Q92841 729 aaKnown RBP8.41□□□□□ -1.06
PTPRR-207ENST00000548220 MYBBP1AQ9BQG0 1328 aaKnown RBP8.41□□□□□ -1.06
PTPRR-207ENST00000548220 PCDHGA4Q9Y5G9 962 aa8.4□□□□□ -1.06
PTPRR-207ENST00000548220 SLIT3O75094 1523 aa8.4□□□□□ -1.07
PTPRR-207ENST00000548220 MARF1Q9Y4F3 1742 aaKnown RBP8.4□□□□□ -1.07
PTPRR-207ENST00000548220 CPDO75976 1380 aa8.39□□□□□ -1.07
PTPRR-207ENST00000548220 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.39□□□□□ -1.07
PTPRR-207ENST00000548220 PHLPP1O60346 1717 aa8.39□□□□□ -1.07
PTPRR-207ENST00000548220 COL16A1Q07092 1604 aaPredicted RBP8.39□□□□□ -1.07
PTPRR-207ENST00000548220 SMG6Q86US8 1419 aaKnown RBP8.39□□□□□ -1.07
PTPRR-207ENST00000548220 SHPRHQ149N8 1683 aa8.39□□□□□ -1.07
PTPRR-207ENST00000548220 PNPLA6Q8IY17 1366 aa8.38□□□□□ -1.07
PTPRR-207ENST00000548220 PSDA5PKW4 1024 aaPredicted RBP8.38□□□□□ -1.07
PTPRR-207ENST00000548220 LHX6Q9UPM6 363 aa8.38□□□□□ -1.07
PTPRR-207ENST00000548220 CRYBG1Q9Y4K1 1723 aa8.38□□□□□ -1.07
PTPRR-207ENST00000548220 RTL1A6NKG5 1358 aa8.37□□□□□ -1.07
PTPRR-207ENST00000548220 GCP02774 474 aa8.37□□□□□ -1.07
PTPRR-207ENST00000548220 PPP2R1AP30153 589 aa8.37□□□□□ -1.07
PTPRR-207ENST00000548220 NME9Q86XW9 330 aa8.37□□□□□ -1.07
PTPRR-207ENST00000548220 PLEKHG2Q9H7P9 1386 aa8.37□□□□□ -1.07
PTPRR-207ENST00000548220 NFAT5O94916 1531 aa8.37□□□□□ -1.07
PTPRR-207ENST00000548220 CC2D1BQ5T0F9 858 aaKnown RBP8.36□□□□□ -1.07
PTPRR-207ENST00000548220 CFAP53Q96M91 514 aa8.36□□□□□ -1.07
PTPRR-207ENST00000548220 GGNBP2Q9H3C7 697 aa8.36□□□□□ -1.07
PTPRR-207ENST00000548220 SPATA31A6Q5VVP1 1343 aa8.36□□□□□ -1.07
PTPRR-207ENST00000548220 CDK12Q9NYV4 1490 aaPredicted RBP8.36□□□□□ -1.07
PTPRR-207ENST00000548220 JCADQ9P266 1359 aa8.36□□□□□ -1.07
PTPRR-207ENST00000548220 ARHGEF25Q86VW2 580 aa8.35□□□□□ -1.07
PTPRR-207ENST00000548220 POLKQ9UBT6 870 aa8.35□□□□□ -1.07
PTPRR-207ENST00000548220 FLT4P35916 1363 aa8.35□□□□□ -1.07
PTPRR-207ENST00000548220 BLMP54132 1417 aaPredicted RBP8.35□□□□□ -1.07
PTPRR-207ENST00000548220 LTN1O94822 1766 aa8.35□□□□□ -1.07
PTPRR-207ENST00000548220 XPCQ01831 940 aaPredicted RBP8.35□□□□□ -1.07
PTPRR-207ENST00000548220 PAXIP1Q6ZW49 1069 aaPredicted RBP8.35□□□□□ -1.07
PTPRR-207ENST00000548220 ABCA3Q99758 1704 aa8.34□□□□□ -1.07
PTPRR-207ENST00000548220 MTHFSP49914 203 aa8.34□□□□□ -1.07
PTPRR-207ENST00000548220 VSIG10Q8N0Z9 540 aa8.34□□□□□ -1.07
PTPRR-207ENST00000548220 NGEFQ8N5V2 710 aa8.34□□□□□ -1.07
PTPRR-207ENST00000548220 IP6K1Q92551 441 aa8.34□□□□□ -1.07
PTPRR-207ENST00000548220 PNNQ9H307 717 aaKnown RBP8.34□□□□□ -1.07
PTPRR-207ENST00000548220 FAM208AQ9UK61 1670 aaKnown RBP8.34□□□□□ -1.07
PTPRR-207ENST00000548220 CFAP44Q96MT7 982 aa8.33□□□□□ -1.08
PTPRR-207ENST00000548220 NUDCQ9Y266 331 aa8.33□□□□□ -1.08
PTPRR-207ENST00000548220 COL18A1P39060 1754 aa8.33□□□□□ -1.08
PTPRR-207ENST00000548220 COL14A1Q05707 1796 aaKnown RBP8.32□□□□□ -1.08
PTPRR-207ENST00000548220 ARHGAP33O14559 1287 aa8.32□□□□□ -1.08
PTPRR-207ENST00000548220 LMOD2Q6P5Q4 547 aa8.32□□□□□ -1.08
PTPRR-207ENST00000548220 PNISRQ8TF01 805 aaKnown RBP8.32□□□□□ -1.08
PTPRR-207ENST00000548220 AXIN2Q9Y2T1 843 aa8.32□□□□□ -1.08
PTPRR-207ENST00000548220 MAP3K19Q56UN5 1328 aa8.32□□□□□ -1.08
PTPRR-207ENST00000548220 NWD2Q9ULI1 1742 aa8.31□□□□□ -1.08
PTPRR-207ENST00000548220 DIAPH1O60610 1272 aaKnown RBP8.31□□□□□ -1.08
PTPRR-207ENST00000548220 AMPHP49418 695 aa8.31□□□□□ -1.08
PTPRR-207ENST00000548220 POTEEQ6S8J3 1075 aa8.31□□□□□ -1.08
PTPRR-207ENST00000548220 PTCD2Q8WV60 388 aaKnown RBP8.31□□□□□ -1.08
PTPRR-207ENST00000548220 HCSTQ9UBK5 93 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms