RNA–Protein interactions for RNA: ENST00000548173.5

PRIM1-203, Transcript of DNA primase subunit 1, humanhuman

TSL 4

Gene PRIM1, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-203ENST00000548173 ANKRD26Q9UPS8 1709 aa10.87□□□□□ -0.67
PRIM1-203ENST00000548173 SMG6Q86US8 1419 aaKnown RBP10.87□□□□□ -0.67
PRIM1-203ENST00000548173 MAP2P11137 1827 aaKnown RBP10.87□□□□□ -0.67
PRIM1-203ENST00000548173 PPM1GO15355 546 aaPredicted RBP10.87□□□□□ -0.67
PRIM1-203ENST00000548173 NSD2O96028 1365 aa10.87□□□□□ -0.67
PRIM1-203ENST00000548173 MEGF6O75095 1541 aa10.86□□□□□ -0.67
PRIM1-203ENST00000548173 PLSCR1O15162 318 aa10.86□□□□□ -0.67
PRIM1-203ENST00000548173 USHBP1Q8N6Y0 703 aa10.86□□□□□ -0.67
PRIM1-203ENST00000548173 KNSTRNQ9Y448 316 aa10.86□□□□□ -0.67
PRIM1-203ENST00000548173 KCNQ2O43526 872 aa10.85□□□□□ -0.67
PRIM1-203ENST00000548173 TNNT2P45379 298 aaPredicted RBP10.85□□□□□ -0.67
PRIM1-203ENST00000548173 AMER1Q5JTC6 1135 aaPredicted RBP10.85□□□□□ -0.67
PRIM1-203ENST00000548173 ZCRB1Q8TBF4 217 aaKnown RBP10.85□□□□□ -0.67
PRIM1-203ENST00000548173 DDX54Q8TDD1 881 aaKnown RBP10.85□□□□□ -0.67
PRIM1-203ENST00000548173 RREB1Q92766 1687 aa10.85□□□□□ -0.67
PRIM1-203ENST00000548173 PSDA5PKW4 1024 aaPredicted RBP10.84□□□□□ -0.67
PRIM1-203ENST00000548173 PER1O15534 1290 aaPredicted RBP10.84□□□□□ -0.67
PRIM1-203ENST00000548173 MORC1Q86VD1 984 aa10.84□□□□□ -0.67
PRIM1-203ENST00000548173 RAPGEF4Q8WZA2 1011 aa10.84□□□□□ -0.67
PRIM1-203ENST00000548173 ACSBG1Q96GR2 724 aa10.84□□□□□ -0.67
PRIM1-203ENST00000548173 NCAPD2Q15021 1401 aa10.84□□□□□ -0.67
PRIM1-203ENST00000548173 RGPD3A6NKT7 1758 aaPredicted RBP10.83□□□□□ -0.68
PRIM1-203ENST00000548173 RGPD4Q7Z3J3 1758 aa10.83□□□□□ -0.68
PRIM1-203ENST00000548173 NHSQ6T4R5 1651 aa10.83□□□□□ -0.68
PRIM1-203ENST00000548173 TATP17735 454 aaPredicted RBP10.83□□□□□ -0.68
PRIM1-203ENST00000548173 R3HDM1Q15032 1099 aaKnown RBP10.83□□□□□ -0.68
PRIM1-203ENST00000548173 PROM2Q8N271 834 aa10.83□□□□□ -0.68
PRIM1-203ENST00000548173 EYA1Q99502 592 aa10.83□□□□□ -0.68
PRIM1-203ENST00000548173 NUP188Q5SRE5 1749 aa10.82□□□□□ -0.68
PRIM1-203ENST00000548173 SHANK3Q9BYB0 1731 aa10.82□□□□□ -0.68
PRIM1-203ENST00000548173 KAT6BQ8WYB5 2073 aa10.82□□□□□ -0.68
PRIM1-203ENST00000548173 DSG3P32926 999 aa10.82□□□□□ -0.68
PRIM1-203ENST00000548173 EIF4A2Q14240 407 aaKnown RBP10.82□□□□□ -0.68
PRIM1-203ENST00000548173 SLC4A2P04920 1241 aa10.81□□□□□ -0.68
PRIM1-203ENST00000548173 NBPF14Q5TI25 921 aa10.81□□□□□ -0.68
PRIM1-203ENST00000548173 TXNRD1Q16881 649 aa10.8□□□□□ -0.68
PRIM1-203ENST00000548173 BTAF1O14981 1849 aa10.79□□□□□ -0.68
PRIM1-203ENST00000548173 CYP27B1O15528 508 aa10.79□□□□□ -0.68
PRIM1-203ENST00000548173 PRIM1P49642 420 aaKnown RBP10.79□□□□□ -0.68
PRIM1-203ENST00000548173 ANO8Q9HCE9 1232 aaPredicted RBP10.79□□□□□ -0.68
PRIM1-203ENST00000548173 IGSF1Q8N6C5 1336 aa10.79□□□□□ -0.68
PRIM1-203ENST00000548173 PCDH11XQ9BZA7 1347 aa10.79□□□□□ -0.68
PRIM1-203ENST00000548173 PCDH11YQ9BZA8 1340 aa10.79□□□□□ -0.68
PRIM1-203ENST00000548173 NPC1L1Q9UHC9 1359 aa10.78□□□□□ -0.68
PRIM1-203ENST00000548173 CC2D1BQ5T0F9 858 aaKnown RBP10.78□□□□□ -0.68
PRIM1-203ENST00000548173 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.78□□□□□ -0.68
PRIM1-203ENST00000548173 PKD1L3Q7Z443 1732 aa10.78□□□□□ -0.68
PRIM1-203ENST00000548173 SYTL4Q96C24 671 aaPredicted RBP10.77□□□□□ -0.69
PRIM1-203ENST00000548173 SPG7Q9UQ90 795 aa10.77□□□□□ -0.69
PRIM1-203ENST00000548173 DOT1LQ8TEK3 1739 aa10.77□□□□□ -0.69
PRIM1-203ENST00000548173 PLEKHG2Q9H7P9 1386 aa10.77□□□□□ -0.69
PRIM1-203ENST00000548173 LRP5O75197 1615 aa10.76□□□□□ -0.69
PRIM1-203ENST00000548173 MTHFSP49914 203 aa10.76□□□□□ -0.69
PRIM1-203ENST00000548173 NKX1-1Q15270 411 aaPredicted RBP10.76□□□□□ -0.69
PRIM1-203ENST00000548173 IL13P35225 146 aa10.75□□□□□ -0.69
PRIM1-203ENST00000548173 LRRC4BQ9NT99 713 aa10.75□□□□□ -0.69
PRIM1-203ENST00000548173 SRCAPQ6ZRS2 3230 aa10.75□□□□□ -0.69
PRIM1-203ENST00000548173 SLC15A2Q16348 729 aa10.74□□□□□ -0.69
PRIM1-203ENST00000548173 SLC27A3Q5K4L6 730 aa10.74□□□□□ -0.69
PRIM1-203ENST00000548173 AEBP1Q8IUX7 1158 aa10.74□□□□□ -0.69
PRIM1-203ENST00000548173 STK32BQ9NY57 414 aa10.74□□□□□ -0.69
PRIM1-203ENST00000548173 PHKG2P15735 406 aa10.73□□□□□ -0.69
PRIM1-203ENST00000548173 IFNL2Q8IZJ0 200 aa10.73□□□□□ -0.69
PRIM1-203ENST00000548173 KDRP35968 1356 aa10.73□□□□□ -0.69
PRIM1-203ENST00000548173 PAPPAQ13219 1627 aa10.73□□□□□ -0.69
PRIM1-203ENST00000548173 TOGARAM1Q9Y4F4 1720 aa10.72□□□□□ -0.69
PRIM1-203ENST00000548173 KCNQ4P56696 695 aa10.72□□□□□ -0.69
PRIM1-203ENST00000548173 CNGB1Q14028 1251 aaPredicted RBP10.72□□□□□ -0.69
PRIM1-203ENST00000548173 PLEKHO1Q53GL0 409 aaPredicted RBP10.72□□□□□ -0.69
PRIM1-203ENST00000548173 SULT6B1Q6IMI4 303 aa10.72□□□□□ -0.69
PRIM1-203ENST00000548173 MPRIPQ6WCQ1 1025 aa10.72□□□□□ -0.69
PRIM1-203ENST00000548173 PDGFDQ9GZP0 370 aaPredicted RBP10.72□□□□□ -0.69
PRIM1-203ENST00000548173 LY75O60449 1722 aa10.72□□□□□ -0.69
PRIM1-203ENST00000548173 ABCB7O75027 752 aa10.71□□□□□ -0.69
PRIM1-203ENST00000548173 ITGB4P16144 1822 aa10.71□□□□□ -0.69
PRIM1-203ENST00000548173 ZNF827Q17R98 1081 aa10.71□□□□□ -0.69
PRIM1-203ENST00000548173 AMOTQ4VCS5 1084 aa10.71□□□□□ -0.69
PRIM1-203ENST00000548173 CASZ1Q86V15 1759 aa10.71□□□□□ -0.69
PRIM1-203ENST00000548173 PIGBQ92521 554 aa10.71□□□□□ -0.69
PRIM1-203ENST00000548173 AKT1S1Q96B36 256 aa10.71□□□□□ -0.69
PRIM1-203ENST00000548173 ZNF219Q9P2Y4 722 aaPredicted RBP10.71□□□□□ -0.69
PRIM1-203ENST00000548173 DIAPH1O60610 1272 aaKnown RBP10.7□□□□□ -0.7
PRIM1-203ENST00000548173 SPON1Q9HCB6 807 aa10.7□□□□□ -0.7
PRIM1-203ENST00000548173 CCNL1Q9UK58 526 aaPredicted RBP10.7□□□□□ -0.7
PRIM1-203ENST00000548173 COL3A1P02461 1466 aaPredicted RBP10.69□□□□□ -0.7
PRIM1-203ENST00000548173 PALLDQ8WX93 1383 aa10.69□□□□□ -0.7
PRIM1-203ENST00000548173 HSP90AB1P08238 724 aaKnown RBP10.69□□□□□ -0.7
PRIM1-203ENST00000548173 ZNF530Q6P9A1 599 aaPredicted RBP10.69□□□□□ -0.7
PRIM1-203ENST00000548173 SMARCC1Q92922 1105 aaPredicted RBP10.69□□□□□ -0.7
PRIM1-203ENST00000548173 DCAF5Q96JK2 942 aa10.69□□□□□ -0.7
PRIM1-203ENST00000548173 TMOD3Q9NYL9 352 aa10.69□□□□□ -0.7
PRIM1-203ENST00000548173 ERVV-2B6SEH9 535 aa10.68□□□□□ -0.7
PRIM1-203ENST00000548173 ZBTB7AO95365 584 aa10.68□□□□□ -0.7
PRIM1-203ENST00000548173 HMOX1P09601 288 aa10.68□□□□□ -0.7
PRIM1-203ENST00000548173 KDM6AO15550 1401 aaPredicted RBP10.67□□□□□ -0.7
PRIM1-203ENST00000548173 PPP2R1AP30153 589 aa10.67□□□□□ -0.7
PRIM1-203ENST00000548173 PTGER2P43116 358 aa10.67□□□□□ -0.7
PRIM1-203ENST00000548173 C1orf141Q5JVX7 400 aa10.67□□□□□ -0.7
PRIM1-203ENST00000548173 MTFR1LQ9H019 292 aa10.67□□□□□ -0.7
PRIM1-203ENST00000548173 ASAP1Q9ULH1 1129 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms