RNA–Protein interactions for RNA: ENST00000548161.1

R3HDM2-212, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 802 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-212ENST00000548161 AMPHP49418 695 aa11.95□□□□□ -0.5
R3HDM2-212ENST00000548161 KCNQ4P56696 695 aa11.95□□□□□ -0.5
R3HDM2-212ENST00000548161 ZCRB1Q8TBF4 217 aaKnown RBP11.95□□□□□ -0.5
R3HDM2-212ENST00000548161 SYTL4Q96C24 671 aaPredicted RBP11.95□□□□□ -0.5
R3HDM2-212ENST00000548161 TFCP2L1Q9NZI6 479 aa11.95□□□□□ -0.5
R3HDM2-212ENST00000548161 QSER1Q2KHR3 1735 aa11.94□□□□□ -0.5
R3HDM2-212ENST00000548161 TONSLQ96HA7 1378 aa11.94□□□□□ -0.5
R3HDM2-212ENST00000548161 FAM208AQ9UK61 1670 aaKnown RBP11.94□□□□□ -0.5
R3HDM2-212ENST00000548161 GPR162Q16538 588 aa11.94□□□□□ -0.5
R3HDM2-212ENST00000548161 COL24A1Q17RW2 1714 aa11.94□□□□□ -0.5
R3HDM2-212ENST00000548161 NSD2O96028 1365 aa11.93□□□□□ -0.5
R3HDM2-212ENST00000548161 C1QTNF8P60827 252 aa11.92□□□□□ -0.5
R3HDM2-212ENST00000548161 NBPF6Q5VWK0 638 aa11.92□□□□□ -0.5
R3HDM2-212ENST00000548161 NBPF4Q96M43 638 aa11.92□□□□□ -0.5
R3HDM2-212ENST00000548161 LY75O60449 1722 aa11.91□□□□□ -0.5
R3HDM2-212ENST00000548161 MEGF6O75095 1541 aa11.91□□□□□ -0.5
R3HDM2-212ENST00000548161 CGNL1Q0VF96 1302 aa11.91□□□□□ -0.5
R3HDM2-212ENST00000548161 FYB1O15117 783 aa11.91□□□□□ -0.5
R3HDM2-212ENST00000548161 KLHL34Q8N239 644 aa11.91□□□□□ -0.5
R3HDM2-212ENST00000548161 CCNL1Q9UK58 526 aaPredicted RBP11.91□□□□□ -0.5
R3HDM2-212ENST00000548161 RGPD2P0DJD1 1756 aa11.91□□□□□ -0.5
R3HDM2-212ENST00000548161 RTL1A6NKG5 1358 aa11.91□□□□□ -0.5
R3HDM2-212ENST00000548161 TUBGCP6Q96RT7 1819 aa11.9□□□□□ -0.5
R3HDM2-212ENST00000548161 RRS1Q15050 365 aaKnown RBP11.9□□□□□ -0.5
R3HDM2-212ENST00000548161 NLGN2Q8NFZ4 835 aa11.9□□□□□ -0.5
R3HDM2-212ENST00000548161 DOT1LQ8TEK3 1739 aa11.9□□□□□ -0.5
R3HDM2-212ENST00000548161 SHANK3Q9BYB0 1731 aa11.9□□□□□ -0.5
R3HDM2-212ENST00000548161 COL23A1Q86Y22 540 aaPredicted RBP11.89□□□□□ -0.51
R3HDM2-212ENST00000548161 USHBP1Q8N6Y0 703 aa11.89□□□□□ -0.51
R3HDM2-212ENST00000548161 RAPGEF4Q8WZA2 1011 aa11.89□□□□□ -0.51
R3HDM2-212ENST00000548161 GGNBP2Q9H3C7 697 aa11.89□□□□□ -0.51
R3HDM2-212ENST00000548161 USP47Q96K76 1375 aa11.89□□□□□ -0.51
R3HDM2-212ENST00000548161 SENP3-EIF4A1A0A087X0R7 540 aa11.88□□□□□ -0.51
R3HDM2-212ENST00000548161 MSH5O43196 834 aa11.87□□□□□ -0.51
R3HDM2-212ENST00000548161 GRIN3BO60391 1043 aa11.87□□□□□ -0.51
R3HDM2-212ENST00000548161 YBX3P16989 372 aaKnown RBP eCLIP11.87□□□□□ -0.51
R3HDM2-212ENST00000548161 TATP17735 454 aaPredicted RBP11.87□□□□□ -0.51
R3HDM2-212ENST00000548161 HMGB2P26583 209 aaKnown RBP11.87□□□□□ -0.51
R3HDM2-212ENST00000548161 TMF1P82094 1093 aa11.87□□□□□ -0.51
R3HDM2-212ENST00000548161 HSP90AB2PQ58FF8 381 aa11.87□□□□□ -0.51
R3HDM2-212ENST00000548161 GIGYF1O75420 1035 aaPredicted RBP11.86□□□□□ -0.51
R3HDM2-212ENST00000548161 FLAD1Q8NFF5 587 aa11.86□□□□□ -0.51
R3HDM2-212ENST00000548161 INSRP06213 1382 aa11.86□□□□□ -0.51
R3HDM2-212ENST00000548161 SMG6Q86US8 1419 aaKnown RBP11.86□□□□□ -0.51
R3HDM2-212ENST00000548161 KIF24Q5T7B8 1368 aa11.85□□□□□ -0.51
R3HDM2-212ENST00000548161 CYP27B1O15528 508 aa11.85□□□□□ -0.51
R3HDM2-212ENST00000548161 PCDH11XQ9BZA7 1347 aa11.85□□□□□ -0.51
R3HDM2-212ENST00000548161 PCDH11YQ9BZA8 1340 aa11.85□□□□□ -0.51
R3HDM2-212ENST00000548161 FLT4P35916 1363 aa11.84□□□□□ -0.51
R3HDM2-212ENST00000548161 MSL1Q68DK7 614 aa11.84□□□□□ -0.51
R3HDM2-212ENST00000548161 MPRIPQ6WCQ1 1025 aa11.84□□□□□ -0.51
R3HDM2-212ENST00000548161 CD2APQ9Y5K6 639 aa11.84□□□□□ -0.51
R3HDM2-212ENST00000548161 PALLDQ8WX93 1383 aa11.83□□□□□ -0.52
R3HDM2-212ENST00000548161 CDCA8Q53HL2 280 aa11.83□□□□□ -0.52
R3HDM2-212ENST00000548161 TRIM26Q12899 539 aaPredicted RBP11.82□□□□□ -0.52
R3HDM2-212ENST00000548161 NKX1-1Q15270 411 aaPredicted RBP11.82□□□□□ -0.52
R3HDM2-212ENST00000548161 SMARCC1Q92922 1105 aaPredicted RBP11.82□□□□□ -0.52
R3HDM2-212ENST00000548161 CARD14Q9BXL6 1004 aa11.82□□□□□ -0.52
R3HDM2-212ENST00000548161 TAF1LQ8IZX4 1826 aa11.81□□□□□ -0.52
R3HDM2-212ENST00000548161 C5P01031 1676 aa11.81□□□□□ -0.52
R3HDM2-212ENST00000548161 PIGBQ92521 554 aa11.81□□□□□ -0.52
R3HDM2-212ENST00000548161 AMIGO3Q86WK7 504 aa11.8□□□□□ -0.52
R3HDM2-212ENST00000548161 AK7Q96M32 723 aa11.8□□□□□ -0.52
R3HDM2-212ENST00000548161 EMILIN1Q9Y6C2 1016 aa11.8□□□□□ -0.52
R3HDM2-212ENST00000548161 ITGB4P16144 1822 aa11.79□□□□□ -0.52
R3HDM2-212ENST00000548161 NCAPD2Q15021 1401 aa11.79□□□□□ -0.52
R3HDM2-212ENST00000548161 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.79□□□□□ -0.52
R3HDM2-212ENST00000548161 SPG7Q9UQ90 795 aa11.79□□□□□ -0.52
R3HDM2-212ENST00000548161 WASHC2AQ641Q2 1341 aa11.79□□□□□ -0.52
R3HDM2-212ENST00000548161 KIF20BQ96Q89 1820 aa11.79□□□□□ -0.52
R3HDM2-212ENST00000548161 C4BP0C0L5 1744 aa11.78□□□□□ -0.52
R3HDM2-212ENST00000548161 TOGARAM1Q9Y4F4 1720 aa11.78□□□□□ -0.52
R3HDM2-212ENST00000548161 LOC102724428A0A0B4J2F2 783 aa11.78□□□□□ -0.52
R3HDM2-212ENST00000548161 SIK1P57059 783 aa11.78□□□□□ -0.52
R3HDM2-212ENST00000548161 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.78□□□□□ -0.52
R3HDM2-212ENST00000548161 NSD3Q9BZ95 1437 aa11.77□□□□□ -0.52
R3HDM2-212ENST00000548161 ATP10DQ9P241 1426 aa11.77□□□□□ -0.52
R3HDM2-212ENST00000548161 UBR3Q6ZT12 1888 aa11.77□□□□□ -0.53
R3HDM2-212ENST00000548161 PPM1GO15355 546 aaPredicted RBP11.77□□□□□ -0.53
R3HDM2-212ENST00000548161 SSFA2P28290 1259 aa11.77□□□□□ -0.53
R3HDM2-212ENST00000548161 SMIM5Q71RC9 77 aa11.77□□□□□ -0.53
R3HDM2-212ENST00000548161 LINC00116Q8NCU8 138 aa11.77□□□□□ -0.53
R3HDM2-212ENST00000548161 EYA1Q99502 592 aa11.77□□□□□ -0.53
R3HDM2-212ENST00000548161 PKD1L3Q7Z443 1732 aa11.77□□□□□ -0.53
R3HDM2-212ENST00000548161 MAP2P11137 1827 aaKnown RBP11.76□□□□□ -0.53
R3HDM2-212ENST00000548161 PHF14O94880 888 aa11.76□□□□□ -0.53
R3HDM2-212ENST00000548161 ASAP1Q9ULH1 1129 aa11.76□□□□□ -0.53
R3HDM2-212ENST00000548161 ITPK1Q13572 414 aa11.75□□□□□ -0.53
R3HDM2-212ENST00000548161 IFNL2Q8IZJ0 200 aa11.75□□□□□ -0.53
R3HDM2-212ENST00000548161 GPBP1L1Q9HC44 474 aaPredicted RBP11.75□□□□□ -0.53
R3HDM2-212ENST00000548161 TMOD3Q9NYL9 352 aa11.75□□□□□ -0.53
R3HDM2-212ENST00000548161 POLKQ9UBT6 870 aa11.75□□□□□ -0.53
R3HDM2-212ENST00000548161 IGSF1Q8N6C5 1336 aa11.75□□□□□ -0.53
R3HDM2-212ENST00000548161 ADCY9O60503 1353 aa11.75□□□□□ -0.53
R3HDM2-212ENST00000548161 PHKG2P15735 406 aa11.74□□□□□ -0.53
R3HDM2-212ENST00000548161 ATG3Q9NT62 314 aa11.74□□□□□ -0.53
R3HDM2-212ENST00000548161 GNPATO15228 680 aa11.73□□□□□ -0.53
R3HDM2-212ENST00000548161 ATP6V1AP38606 617 aa11.73□□□□□ -0.53
R3HDM2-212ENST00000548161 ANKRD26Q9UPS8 1709 aa11.73□□□□□ -0.53
R3HDM2-212ENST00000548161 WWC3Q9ULE0 1092 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms