RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 CDCA8Q53HL2 280 aa17.39■□□□□ 0.37
GCN1-204ENST00000548132 ACSBG1Q96GR2 724 aa17.39■□□□□ 0.37
GCN1-204ENST00000548132 PDGFDQ9GZP0 370 aaPredicted RBP17.39■□□□□ 0.37
GCN1-204ENST00000548132 NBPF6Q5VWK0 638 aa17.38■□□□□ 0.37
GCN1-204ENST00000548132 NBPF4Q96M43 638 aa17.38■□□□□ 0.37
GCN1-204ENST00000548132 EMILIN1Q9Y6C2 1016 aa17.38■□□□□ 0.37
GCN1-204ENST00000548132 HSPA5P11021 654 aaKnown RBP17.37■□□□□ 0.37
GCN1-204ENST00000548132 AMPHP49418 695 aa17.37■□□□□ 0.37
GCN1-204ENST00000548132 TXNRD1Q16881 649 aa17.37■□□□□ 0.37
GCN1-204ENST00000548132 USHBP1Q8N6Y0 703 aa17.37■□□□□ 0.37
GCN1-204ENST00000548132 HSP90AB2PQ58FF8 381 aa17.36■□□□□ 0.37
GCN1-204ENST00000548132 NBPF14Q5TI25 921 aa17.34■□□□□ 0.37
GCN1-204ENST00000548132 ZNF827Q17R98 1081 aa17.32■□□□□ 0.36
GCN1-204ENST00000548132 CCER1Q8TC90 406 aaPredicted RBP17.32■□□□□ 0.36
GCN1-204ENST00000548132 LRRC4BQ9NT99 713 aa17.32■□□□□ 0.36
GCN1-204ENST00000548132 UBR3Q6ZT12 1888 aa17.31■□□□□ 0.36
GCN1-204ENST00000548132 VIRMAQ69YN4 1812 aaKnown RBP17.31■□□□□ 0.36
GCN1-204ENST00000548132 CGNL1Q0VF96 1302 aa17.3■□□□□ 0.36
GCN1-204ENST00000548132 EIF4G2P78344 907 aaKnown RBP eCLIP17.3■□□□□ 0.36
GCN1-204ENST00000548132 DDX54Q8TDD1 881 aaKnown RBP17.3■□□□□ 0.36
GCN1-204ENST00000548132 PTGER2P43116 358 aa17.29■□□□□ 0.36
GCN1-204ENST00000548132 SLC15A2Q16348 729 aa17.29■□□□□ 0.36
GCN1-204ENST00000548132 C4BP0C0L5 1744 aa17.29■□□□□ 0.36
GCN1-204ENST00000548132 ZCRB1Q8TBF4 217 aaKnown RBP17.28■□□□□ 0.36
GCN1-204ENST00000548132 COL5A3P25940 1745 aaPredicted RBP17.27■□□□□ 0.36
GCN1-204ENST00000548132 WASHC2AQ641Q2 1341 aa17.27■□□□□ 0.36
GCN1-204ENST00000548132 SGIP1Q9BQI5 828 aa17.27■□□□□ 0.36
GCN1-204ENST00000548132 SPON1Q9HCB6 807 aa17.27■□□□□ 0.36
GCN1-204ENST00000548132 POLKQ9UBT6 870 aa17.27■□□□□ 0.36
GCN1-204ENST00000548132 PCDH11XQ9BZA7 1347 aa17.26■□□□□ 0.35
GCN1-204ENST00000548132 PCDH11YQ9BZA8 1340 aa17.26■□□□□ 0.35
GCN1-204ENST00000548132 CYP27B1O15528 508 aa17.26■□□□□ 0.35
GCN1-204ENST00000548132 UTRNP46939 3433 aa17.26■□□□□ 0.35
GCN1-204ENST00000548132 ZNF831Q5JPB2 1677 aa17.26■□□□□ 0.35
GCN1-204ENST00000548132 ZBTB7AO95365 584 aa17.25■□□□□ 0.35
GCN1-204ENST00000548132 AKT1S1Q96B36 256 aa17.25■□□□□ 0.35
GCN1-204ENST00000548132 STK32BQ9NY57 414 aa17.25■□□□□ 0.35
GCN1-204ENST00000548132 CICQ96RK0 1608 aaPredicted RBP17.25■□□□□ 0.35
GCN1-204ENST00000548132 PRIM1P49642 420 aaKnown RBP17.24■□□□□ 0.35
GCN1-204ENST00000548132 POLR3GLQ9BT43 218 aa17.24■□□□□ 0.35
GCN1-204ENST00000548132 KIF7Q2M1P5 1343 aa17.23■□□□□ 0.35
GCN1-204ENST00000548132 SCN11AQ9UI33 1791 aa17.23■□□□□ 0.35
GCN1-204ENST00000548132 KCNQ4P56696 695 aa17.23■□□□□ 0.35
GCN1-204ENST00000548132 RAPGEF4Q8WZA2 1011 aa17.23■□□□□ 0.35
GCN1-204ENST00000548132 PLEKHG2Q9H7P9 1386 aa17.23■□□□□ 0.35
GCN1-204ENST00000548132 PNPLA7Q6ZV29 1317 aa17.22■□□□□ 0.35
GCN1-204ENST00000548132 IGSF1Q8N6C5 1336 aa17.22■□□□□ 0.35
GCN1-204ENST00000548132 TATP17735 454 aaPredicted RBP17.22■□□□□ 0.35
GCN1-204ENST00000548132 EIF4A2Q14240 407 aaKnown RBP17.22■□□□□ 0.35
GCN1-204ENST00000548132 EYA1Q99502 592 aa17.22■□□□□ 0.35
GCN1-204ENST00000548132 PANK3Q9H999 370 aa17.22■□□□□ 0.35
GCN1-204ENST00000548132 ADAMTS7Q9UKP4 1686 aa17.22■□□□□ 0.35
GCN1-204ENST00000548132 COL3A1P02461 1466 aaPredicted RBP17.2■□□□□ 0.34
GCN1-204ENST00000548132 SLC27A3Q5K4L6 730 aa17.2■□□□□ 0.34
GCN1-204ENST00000548132 SYTL4Q96C24 671 aaPredicted RBP17.2■□□□□ 0.34
GCN1-204ENST00000548132 C4AP0C0L4 1744 aa17.2■□□□□ 0.34
GCN1-204ENST00000548132 TJP1Q07157 1748 aa17.2■□□□□ 0.34
GCN1-204ENST00000548132 KDM6AO15550 1401 aaPredicted RBP17.2■□□□□ 0.34
GCN1-204ENST00000548132 PALLDQ8WX93 1383 aa17.19■□□□□ 0.34
GCN1-204ENST00000548132 PPM1GO15355 546 aaPredicted RBP17.19■□□□□ 0.34
GCN1-204ENST00000548132 MTFR1LQ9H019 292 aa17.19■□□□□ 0.34
GCN1-204ENST00000548132 MAP3K5Q99683 1374 aa17.18■□□□□ 0.34
GCN1-204ENST00000548132 TNNT2P45379 298 aaPredicted RBP17.18■□□□□ 0.34
GCN1-204ENST00000548132 ATF5Q9Y2D1 282 aaPredicted RBP17.18■□□□□ 0.34
GCN1-204ENST00000548132 KDRP35968 1356 aa17.17■□□□□ 0.34
GCN1-204ENST00000548132 GOLGB1Q14789 3259 aaKnown RBP17.17■□□□□ 0.34
GCN1-204ENST00000548132 NKX1-1Q15270 411 aaPredicted RBP17.17■□□□□ 0.34
GCN1-204ENST00000548132 AMER1Q5JTC6 1135 aaPredicted RBP17.17■□□□□ 0.34
GCN1-204ENST00000548132 CHD4Q14839 1912 aa17.17■□□□□ 0.34
GCN1-204ENST00000548132 KIAA1551Q9HCM1 1747 aa17.16■□□□□ 0.34
GCN1-204ENST00000548132 PPP1R1BQ9UD71 204 aaPredicted RBP17.15■□□□□ 0.34
GCN1-204ENST00000548132 CCNL1Q9UK58 526 aaPredicted RBP17.15■□□□□ 0.34
GCN1-204ENST00000548132 MRC1P22897 1456 aa17.15■□□□□ 0.34
GCN1-204ENST00000548132 AMIGO3Q86WK7 504 aa17.14■□□□□ 0.33
GCN1-204ENST00000548132 MYH14Q7Z406 1995 aaKnown RBP17.14■□□□□ 0.33
GCN1-204ENST00000548132 UBR2Q8IWV8 1755 aa17.13■□□□□ 0.33
GCN1-204ENST00000548132 AEBP1Q8IUX7 1158 aa17.13■□□□□ 0.33
GCN1-204ENST00000548132 FHDC1Q9C0D6 1143 aaPredicted RBP17.13■□□□□ 0.33
GCN1-204ENST00000548132 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.13■□□□□ 0.334e-7■□□□□ 10.6
GCN1-204ENST00000548132 SIPA1L3O60292 1781 aaPredicted RBP17.12■□□□□ 0.33
GCN1-204ENST00000548132 PHKG2P15735 406 aa17.12■□□□□ 0.33
GCN1-204ENST00000548132 PIGBQ92521 554 aa17.11■□□□□ 0.33
GCN1-204ENST00000548132 KIF13BQ9NQT8 1826 aa17.11■□□□□ 0.33
GCN1-204ENST00000548132 PER1O15534 1290 aaPredicted RBP17.1■□□□□ 0.33
GCN1-204ENST00000548132 MPRIPQ6WCQ1 1025 aa17.1■□□□□ 0.33
GCN1-204ENST00000548132 SPG7Q9UQ90 795 aa17.09■□□□□ 0.33
GCN1-204ENST00000548132 MORC1Q86VD1 984 aa17.08■□□□□ 0.32
GCN1-204ENST00000548132 COL23A1Q86Y22 540 aaPredicted RBP17.08■□□□□ 0.32
GCN1-204ENST00000548132 SYT17Q9BSW7 474 aa17.08■□□□□ 0.32
GCN1-204ENST00000548132 NPC1L1Q9UHC9 1359 aa17.07■□□□□ 0.32
GCN1-204ENST00000548132 IL13P35225 146 aa17.07■□□□□ 0.32
GCN1-204ENST00000548132 SLC16A10Q8TF71 515 aa17.07■□□□□ 0.32
GCN1-204ENST00000548132 ARXQ96QS3 562 aa17.07■□□□□ 0.32
GCN1-204ENST00000548132 TFCP2L1Q9NZI6 479 aa17.07■□□□□ 0.32
GCN1-204ENST00000548132 ITPK1Q13572 414 aa17.06■□□□□ 0.32
GCN1-204ENST00000548132 IFNL2Q8IZJ0 200 aa17.06■□□□□ 0.32
GCN1-204ENST00000548132 LINC00116Q8NCU8 138 aa17.06■□□□□ 0.32
GCN1-204ENST00000548132 KNSTRNQ9Y448 316 aa17.06■□□□□ 0.32
GCN1-204ENST00000548132 KCPQ6ZWJ8 1503 aa17.06■□□□□ 0.32
GCN1-204ENST00000548132 BRCA1P38398 1863 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms