RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 FLT4P35916 1363 aa12.13□□□□□ -0.47
SMARCC2-205ENST00000548130 INSRP06213 1382 aa12.12□□□□□ -0.47
SMARCC2-205ENST00000548130 THSD7AQ9UPZ6 1657 aa12.12□□□□□ -0.47
SMARCC2-205ENST00000548130 KIF24Q5T7B8 1368 aa12.11□□□□□ -0.47
SMARCC2-205ENST00000548130 PRKAR2AP13861 404 aaKnown RBP12.11□□□□□ -0.47
SMARCC2-205ENST00000548130 NBPF6Q5VWK0 638 aa12.11□□□□□ -0.47
SMARCC2-205ENST00000548130 USHBP1Q8N6Y0 703 aa12.11□□□□□ -0.47
SMARCC2-205ENST00000548130 NBPF4Q96M43 638 aa12.11□□□□□ -0.47
SMARCC2-205ENST00000548130 BRWD3Q6RI45 1802 aa12.1□□□□□ -0.47
SMARCC2-205ENST00000548130 IL2RBP14784 551 aa12.1□□□□□ -0.47
SMARCC2-205ENST00000548130 DDB1Q16531 1140 aa12.1□□□□□ -0.47
SMARCC2-205ENST00000548130 CDCA7Q9BWT1 371 aaPredicted RBP12.1□□□□□ -0.47
SMARCC2-205ENST00000548130 PEAK1Q9H792 1746 aa12.1□□□□□ -0.47
SMARCC2-205ENST00000548130 DISP2A7MBM2 1401 aa12.1□□□□□ -0.47
SMARCC2-205ENST00000548130 SMG6Q86US8 1419 aaKnown RBP12.09□□□□□ -0.47
SMARCC2-205ENST00000548130 EXOC5O00471 708 aa12.08□□□□□ -0.48
SMARCC2-205ENST00000548130 EIF4A2Q14240 407 aaKnown RBP12.08□□□□□ -0.48
SMARCC2-205ENST00000548130 NPC1L1Q9UHC9 1359 aa12.07□□□□□ -0.48
SMARCC2-205ENST00000548130 DDX10Q13206 875 aaKnown RBP12.07□□□□□ -0.48
SMARCC2-205ENST00000548130 FAM196AQ6ZSG2 479 aa12.07□□□□□ -0.48
SMARCC2-205ENST00000548130 MARCH10Q8NA82 808 aaPredicted RBP12.07□□□□□ -0.48
SMARCC2-205ENST00000548130 ANKRD26Q9UPS8 1709 aa12.07□□□□□ -0.48
SMARCC2-205ENST00000548130 TRIM37O94972 964 aa12.06□□□□□ -0.48
SMARCC2-205ENST00000548130 MTHFSP49914 203 aa12.06□□□□□ -0.48
SMARCC2-205ENST00000548130 EYA1Q99502 592 aa12.06□□□□□ -0.48
SMARCC2-205ENST00000548130 SF3B2Q13435 895 aaKnown RBP12.05□□□□□ -0.48
SMARCC2-205ENST00000548130 MAP2P11137 1827 aaKnown RBP12.04□□□□□ -0.48
SMARCC2-205ENST00000548130 LRRC37A3O60309 1634 aa12.04□□□□□ -0.48
SMARCC2-205ENST00000548130 TNS2Q63HR2 1409 aa12.04□□□□□ -0.48
SMARCC2-205ENST00000548130 PARP4Q9UKK3 1724 aaKnown RBP12.04□□□□□ -0.48
SMARCC2-205ENST00000548130 HAX1O00165 279 aa12.04□□□□□ -0.48
SMARCC2-205ENST00000548130 DEFB132Q7Z7B7 95 aa12.04□□□□□ -0.48
SMARCC2-205ENST00000548130 CCDC125Q86Z20 511 aa12.04□□□□□ -0.48
SMARCC2-205ENST00000548130 DDX54Q8TDD1 881 aaKnown RBP12.04□□□□□ -0.48
SMARCC2-205ENST00000548130 RAPGEF4Q8WZA2 1011 aa12.04□□□□□ -0.48
SMARCC2-205ENST00000548130 MEGF6O75095 1541 aa12.04□□□□□ -0.48
SMARCC2-205ENST00000548130 TATP17735 454 aaPredicted RBP12.03□□□□□ -0.48
SMARCC2-205ENST00000548130 ZCRB1Q8TBF4 217 aaKnown RBP12.03□□□□□ -0.48
SMARCC2-205ENST00000548130 OVOS2A0A0G2JMS6 1433 aa12.03□□□□□ -0.48
SMARCC2-205ENST00000548130 IL13P35225 146 aa12.02□□□□□ -0.49
SMARCC2-205ENST00000548130 FAM208AQ9UK61 1670 aaKnown RBP12.02□□□□□ -0.49
SMARCC2-205ENST00000548130 RGPD2P0DJD1 1756 aa12.02□□□□□ -0.49
SMARCC2-205ENST00000548130 PTF1AQ7RTS3 328 aa12.01□□□□□ -0.49
SMARCC2-205ENST00000548130 ACSBG1Q96GR2 724 aa12.01□□□□□ -0.49
SMARCC2-205ENST00000548130 WNK3Q9BYP7 1800 aa12.01□□□□□ -0.49
SMARCC2-205ENST00000548130 IGSF1Q8N6C5 1336 aa12.01□□□□□ -0.49
SMARCC2-205ENST00000548130 APBA3O96018 575 aa12□□□□□ -0.49
SMARCC2-205ENST00000548130 PPP2R1AP30153 589 aa12□□□□□ -0.49
SMARCC2-205ENST00000548130 BAG6P46379 1132 aa12□□□□□ -0.49
SMARCC2-205ENST00000548130 EN1Q05925 392 aaPredicted RBP12□□□□□ -0.49
SMARCC2-205ENST00000548130 AEBP1Q8IUX7 1158 aa12□□□□□ -0.49
SMARCC2-205ENST00000548130 NCAPD2Q15021 1401 aa12□□□□□ -0.49
SMARCC2-205ENST00000548130 ZNF316A6NFI3 1004 aaPredicted RBP11.99□□□□□ -0.49
SMARCC2-205ENST00000548130 KCNQ2O43526 872 aa11.99□□□□□ -0.49
SMARCC2-205ENST00000548130 DIAPH1O60610 1272 aaKnown RBP11.99□□□□□ -0.49
SMARCC2-205ENST00000548130 BCL9O00512 1426 aa11.98□□□□□ -0.49
SMARCC2-205ENST00000548130 SULT6B1Q6IMI4 303 aa11.98□□□□□ -0.49
SMARCC2-205ENST00000548130 SP7Q8TDD2 431 aaPredicted RBP11.98□□□□□ -0.49
SMARCC2-205ENST00000548130 BCL11BQ9C0K0 894 aaPredicted RBP11.98□□□□□ -0.49
SMARCC2-205ENST00000548130 PCDH11XQ9BZA7 1347 aa11.97□□□□□ -0.49
SMARCC2-205ENST00000548130 PCDH11YQ9BZA8 1340 aa11.97□□□□□ -0.49
SMARCC2-205ENST00000548130 CYP27B1O15528 508 aa11.97□□□□□ -0.49
SMARCC2-205ENST00000548130 HMOX1P09601 288 aa11.97□□□□□ -0.49
SMARCC2-205ENST00000548130 EZH2Q15910 746 aaKnown RBP11.97□□□□□ -0.49
SMARCC2-205ENST00000548130 PARD3Q8TEW0 1356 aa11.96□□□□□ -0.49
SMARCC2-205ENST00000548130 U2SURPO15042 1029 aaKnown RBP11.96□□□□□ -0.49
SMARCC2-205ENST00000548130 CHADLQ6NUI6 762 aa11.96□□□□□ -0.49
SMARCC2-205ENST00000548130 CFAP53Q96M91 514 aa11.96□□□□□ -0.49
SMARCC2-205ENST00000548130 CAMKK2Q96RR4 588 aa11.96□□□□□ -0.49
SMARCC2-205ENST00000548130 SPG7Q9UQ90 795 aa11.96□□□□□ -0.49
SMARCC2-205ENST00000548130 COL3A1P02461 1466 aaPredicted RBP11.95□□□□□ -0.5
SMARCC2-205ENST00000548130 PRIM1P49642 420 aaKnown RBP11.95□□□□□ -0.5
SMARCC2-205ENST00000548130 SYTL4Q96C24 671 aaPredicted RBP11.95□□□□□ -0.5
SMARCC2-205ENST00000548130 EP400Q96L91 3159 aa11.94□□□□□ -0.5
SMARCC2-205ENST00000548130 RALBP1Q15311 655 aa11.94□□□□□ -0.5
SMARCC2-205ENST00000548130 PLEKHO1Q53GL0 409 aaPredicted RBP11.94□□□□□ -0.5
SMARCC2-205ENST00000548130 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.94□□□□□ -0.52e-7■■■□□ 18.4
SMARCC2-205ENST00000548130 RGPD1P0DJD0 1748 aa11.94□□□□□ -0.5
SMARCC2-205ENST00000548130 PHKG2P15735 406 aa11.93□□□□□ -0.5
SMARCC2-205ENST00000548130 ZNF530Q6P9A1 599 aaPredicted RBP11.93□□□□□ -0.5
SMARCC2-205ENST00000548130 KDRP35968 1356 aa11.92□□□□□ -0.5
SMARCC2-205ENST00000548130 TNS1Q9HBL0 1735 aaKnown RBP11.92□□□□□ -0.5
SMARCC2-205ENST00000548130 AMOTQ4VCS5 1084 aa11.92□□□□□ -0.5
SMARCC2-205ENST00000548130 IFNL2Q8IZJ0 200 aa11.92□□□□□ -0.5
SMARCC2-205ENST00000548130 NUDCQ9Y266 331 aa11.92□□□□□ -0.5
SMARCC2-205ENST00000548130 KAT6BQ8WYB5 2073 aa11.91□□□□□ -0.5
SMARCC2-205ENST00000548130 PLSCR1O15162 318 aa11.91□□□□□ -0.5
SMARCC2-205ENST00000548130 U2AF1L5P0DN76 240 aaPredicted RBP11.91□□□□□ -0.5
SMARCC2-205ENST00000548130 U2AF1Q01081 240 aaKnown RBP eCLIP11.91□□□□□ -0.5
SMARCC2-205ENST00000548130 NKX1-1Q15270 411 aaPredicted RBP11.91□□□□□ -0.5
SMARCC2-205ENST00000548130 PROM2Q8N271 834 aa11.91□□□□□ -0.5
SMARCC2-205ENST00000548130 SHANK3Q9BYB0 1731 aa11.91□□□□□ -0.5
SMARCC2-205ENST00000548130 MPRIPQ6WCQ1 1025 aa11.9□□□□□ -0.5
SMARCC2-205ENST00000548130 SBF2Q86WG5 1849 aa11.9□□□□□ -0.5
SMARCC2-205ENST00000548130 MYBBP1AQ9BQG0 1328 aaKnown RBP11.89□□□□□ -0.51
SMARCC2-205ENST00000548130 PKD1L3Q7Z443 1732 aa11.89□□□□□ -0.51
SMARCC2-205ENST00000548130 PRKAR2BP31323 418 aa11.89□□□□□ -0.51
SMARCC2-205ENST00000548130 TXNRD1Q16881 649 aa11.89□□□□□ -0.51
SMARCC2-205ENST00000548130 C1orf141Q5JVX7 400 aa11.89□□□□□ -0.51
SMARCC2-205ENST00000548130 PRKRIP1Q9H875 184 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms