RNA–Protein interactions for RNA: ENST00000548126.1

CCDC59-203, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 984 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-203ENST00000548126 SSTR3P32745 418 aaPredicted RBP11.29□□□□□ -0.6
CCDC59-203ENST00000548126 TTLL12Q14166 644 aaPredicted RBP11.29□□□□□ -0.6
CCDC59-203ENST00000548126 ARHGAP5Q13017 1502 aa11.29□□□□□ -0.6
CCDC59-203ENST00000548126 CDK13Q14004 1512 aaKnown RBP11.29□□□□□ -0.6
CCDC59-203ENST00000548126 CAPN5O15484 640 aaPredicted RBP11.28□□□□□ -0.6
CCDC59-203ENST00000548126 SIAH2O43255 324 aa11.28□□□□□ -0.6
CCDC59-203ENST00000548126 PLEKHG3A1L390 1219 aa11.27□□□□□ -0.61
CCDC59-203ENST00000548126 PTCRAQ6ISU1 281 aaPredicted RBP11.27□□□□□ -0.61
CCDC59-203ENST00000548126 SPIRE2Q8WWL2 714 aa11.27□□□□□ -0.61
CCDC59-203ENST00000548126 CDK11AQ9UQ88 783 aaPredicted RBP11.27□□□□□ -0.61
CCDC59-203ENST00000548126 DNMT1P26358 1616 aaKnown RBP11.27□□□□□ -0.61
CCDC59-203ENST00000548126 A2ML1A8K2U0 1454 aa11.26□□□□□ -0.61
CCDC59-203ENST00000548126 KIDINS220Q9ULH0 1771 aa11.26□□□□□ -0.61
CCDC59-203ENST00000548126 VWDEQ8N2E2 1590 aa11.26□□□□□ -0.61
CCDC59-203ENST00000548126 FAM181BA6NEQ2 426 aa11.26□□□□□ -0.61
CCDC59-203ENST00000548126 SH3BP2P78314 561 aa11.26□□□□□ -0.61
CCDC59-203ENST00000548126 ANKLE2Q86XL3 938 aa11.26□□□□□ -0.61
CCDC59-203ENST00000548126 EVA1BQ9NVM1 165 aa11.26□□□□□ -0.61
CCDC59-203ENST00000548126 PCDHGC3Q9UN70 934 aa11.26□□□□□ -0.61
CCDC59-203ENST00000548126 CLTCQ00610 1675 aaKnown RBP11.26□□□□□ -0.61
CCDC59-203ENST00000548126 POLR1AO95602 1720 aaPredicted RBP11.26□□□□□ -0.61
CCDC59-203ENST00000548126 NEURL4Q96JN8 1562 aa11.25□□□□□ -0.61
CCDC59-203ENST00000548126 DIXDC1Q155Q3 683 aa11.25□□□□□ -0.61
CCDC59-203ENST00000548126 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.25□□□□□ -0.61
CCDC59-203ENST00000548126 NPAS3Q8IXF0 933 aa11.25□□□□□ -0.61
CCDC59-203ENST00000548126 UNC93B1Q9H1C4 597 aa11.25□□□□□ -0.61
CCDC59-203ENST00000548126 SETD1AO15047 1707 aaKnown RBP11.25□□□□□ -0.61
CCDC59-203ENST00000548126 MTMR2Q13614 643 aa11.24□□□□□ -0.61
CCDC59-203ENST00000548126 DESI1Q6ICB0 168 aa11.24□□□□□ -0.61
CCDC59-203ENST00000548126 PRR7Q8TB68 274 aa11.24□□□□□ -0.61
CCDC59-203ENST00000548126 NXF1Q9UBU9 619 aaKnown RBP11.24□□□□□ -0.61
CCDC59-203ENST00000548126 VARSP26640 1264 aaKnown RBP11.23□□□□□ -0.61
CCDC59-203ENST00000548126 KCNH2Q12809 1159 aa11.23□□□□□ -0.61
CCDC59-203ENST00000548126 KIF14Q15058 1648 aa11.23□□□□□ -0.61
CCDC59-203ENST00000548126 LRRC7Q96NW7 1537 aa11.22□□□□□ -0.61
CCDC59-203ENST00000548126 ATP1B4Q9UN42 357 aaPredicted RBP11.22□□□□□ -0.61
CCDC59-203ENST00000548126 CDC42BPBQ9Y5S2 1711 aa11.21□□□□□ -0.61
CCDC59-203ENST00000548126 GGT6Q6P531 493 aa11.21□□□□□ -0.61
CCDC59-203ENST00000548126 IRF7Q92985 503 aa11.21□□□□□ -0.61
CCDC59-203ENST00000548126 RNF17Q9BXT8 1623 aaKnown RBP11.2□□□□□ -0.62
CCDC59-203ENST00000548126 MOXD2PA6NHM9 499 aa11.2□□□□□ -0.62
CCDC59-203ENST00000548126 BMP1P13497 986 aa11.2□□□□□ -0.62
CCDC59-203ENST00000548126 NDUFV2P19404 249 aa11.2□□□□□ -0.62
CCDC59-203ENST00000548126 GJA5P36382 358 aa11.2□□□□□ -0.62
CCDC59-203ENST00000548126 AMHR2Q16671 573 aa11.2□□□□□ -0.62
CCDC59-203ENST00000548126 LINC01559Q495D7 138 aa11.2□□□□□ -0.62
CCDC59-203ENST00000548126 THEMISQ8N1K5 641 aaPredicted RBP11.2□□□□□ -0.62
CCDC59-203ENST00000548126 MPNDQ8N594 471 aa11.2□□□□□ -0.62
CCDC59-203ENST00000548126 ZNF511Q8NB15 262 aa11.2□□□□□ -0.62
CCDC59-203ENST00000548126 BAP1Q92560 729 aa11.2□□□□□ -0.62
CCDC59-203ENST00000548126 ITSN2Q9NZM3 1697 aa11.2□□□□□ -0.62
CCDC59-203ENST00000548126 ABCC1P33527 1531 aa11.19□□□□□ -0.62
CCDC59-203ENST00000548126 MED14O60244 1454 aa11.19□□□□□ -0.62
CCDC59-203ENST00000548126 NPHP4O75161 1426 aaPredicted RBP11.19□□□□□ -0.62
CCDC59-203ENST00000548126 STRCP1A6NGW2 1772 aa11.19□□□□□ -0.62
CCDC59-203ENST00000548126 BARGINQ6ZT62 677 aa11.19□□□□□ -0.62
CCDC59-203ENST00000548126 TROQ12816 1431 aaPredicted RBP11.18□□□□□ -0.62
CCDC59-203ENST00000548126 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.18□□□□□ -0.62
CCDC59-203ENST00000548126 SCARF1Q14162 830 aa11.18□□□□□ -0.62
CCDC59-203ENST00000548126 TRIM46Q7Z4K8 759 aa11.18□□□□□ -0.62
CCDC59-203ENST00000548126 SPAG9O60271 1321 aaKnown RBP11.17□□□□□ -0.62
CCDC59-203ENST00000548126 CTHP32929 405 aa11.17□□□□□ -0.62
CCDC59-203ENST00000548126 GIGYF2Q6Y7W6 1299 aaKnown RBP11.17□□□□□ -0.62
CCDC59-203ENST00000548126 FAM174AQ8TBP5 190 aa11.17□□□□□ -0.62
CCDC59-203ENST00000548126 BEGAINQ9BUH8 593 aa11.17□□□□□ -0.62
CCDC59-203ENST00000548126 CLIP1P30622 1438 aa11.17□□□□□ -0.62
CCDC59-203ENST00000548126 FAM135BQ49AJ0 1406 aa11.17□□□□□ -0.62
CCDC59-203ENST00000548126 DEPDC5O75140 1603 aa11.17□□□□□ -0.62
CCDC59-203ENST00000548126 FBXO31Q5XUX0 539 aaPredicted RBP11.16□□□□□ -0.62
CCDC59-203ENST00000548126 TLL2Q9Y6L7 1015 aa11.16□□□□□ -0.62
CCDC59-203ENST00000548126 SAMD9LQ8IVG5 1584 aa11.16□□□□□ -0.62
CCDC59-203ENST00000548126 TNRQ92752 1358 aa11.16□□□□□ -0.62
CCDC59-203ENST00000548126 ZMYND10O75800 440 aa11.15□□□□□ -0.62
CCDC59-203ENST00000548126 NNTQ13423 1086 aa11.15□□□□□ -0.62
CCDC59-203ENST00000548126 SYNMO15061 1565 aa11.15□□□□□ -0.62
CCDC59-203ENST00000548126 ADH1CP00326 375 aa11.14□□□□□ -0.63
CCDC59-203ENST00000548126 IQGAP1P46940 1657 aa11.14□□□□□ -0.63
CCDC59-203ENST00000548126 PREX2Q70Z35 1606 aa11.13□□□□□ -0.63
CCDC59-203ENST00000548126 A2MP01023 1474 aa11.13□□□□□ -0.63
CCDC59-203ENST00000548126 TRIM52Q96A61 297 aa11.13□□□□□ -0.63
CCDC59-203ENST00000548126 ZFP42Q96MM3 310 aa11.13□□□□□ -0.63
CCDC59-203ENST00000548126 PLXNC1O60486 1568 aa11.12□□□□□ -0.63
CCDC59-203ENST00000548126 HNRNPMP52272 730 aaKnown RBP eCLIP11.12□□□□□ -0.63
CCDC59-203ENST00000548126 LCE2CQ5TA81 110 aa11.12□□□□□ -0.63
CCDC59-203ENST00000548126 LYPD8Q6UX82 237 aa11.12□□□□□ -0.63
CCDC59-203ENST00000548126 BCANQ96GW7 911 aa11.12□□□□□ -0.63
CCDC59-203ENST00000548126 TBC1D2Q9BYX2 928 aa11.12□□□□□ -0.63
CCDC59-203ENST00000548126 ZBTB3Q9H5J0 574 aa11.12□□□□□ -0.63
CCDC59-203ENST00000548126 FAM135AQ9P2D6 1515 aa11.11□□□□□ -0.63
CCDC59-203ENST00000548126 H3BM21 787 aa11.11□□□□□ -0.63
CCDC59-203ENST00000548126 MRPL14Q6P1L8 145 aaKnown RBP11.11□□□□□ -0.63
CCDC59-203ENST00000548126 RSBN1LQ6PCB5 846 aaPredicted RBP11.11□□□□□ -0.63
CCDC59-203ENST00000548126 ZNF777Q9ULD5 760 aaPredicted RBP11.11□□□□□ -0.63
CCDC59-203ENST00000548126 UGGT1Q9NYU2 1555 aa11.11□□□□□ -0.63
CCDC59-203ENST00000548126 FMN1Q68DA7 1419 aa11.1□□□□□ -0.63
CCDC59-203ENST00000548126 GMPRP36959 345 aa11.1□□□□□ -0.63
CCDC59-203ENST00000548126 WDR4P57081 412 aaKnown RBP11.1□□□□□ -0.63
CCDC59-203ENST00000548126 ZNF772Q68DY9 489 aaPredicted RBP11.1□□□□□ -0.63
CCDC59-203ENST00000548126 ZSCAN1Q8NBB4 408 aa11.1□□□□□ -0.63
CCDC59-203ENST00000548126 MIA2Q96PC5 1412 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms