RNA–Protein interactions for RNA: ENST00000548015.1

KRT18-204, Transcript of keratin 18, humanhuman

TSL 2

Gene KRT18, Length 928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-204ENST00000548015 RGPD4Q7Z3J3 1758 aa15.31■□□□□ 0.04
KRT18-204ENST00000548015 DCAF8L1A6NGE4 600 aa15.3■□□□□ 0.04
KRT18-204ENST00000548015 MEGF6O75095 1541 aa15.3■□□□□ 0.04
KRT18-204ENST00000548015 ARXQ96QS3 562 aa15.3■□□□□ 0.04
KRT18-204ENST00000548015 TIMELESSQ9UNS1 1208 aa15.29■□□□□ 0.04
KRT18-204ENST00000548015 CASZ1Q86V15 1759 aa15.29■□□□□ 0.04
KRT18-204ENST00000548015 INSRP06213 1382 aa15.28■□□□□ 0.04
KRT18-204ENST00000548015 CGNL1Q0VF96 1302 aa15.28■□□□□ 0.04
KRT18-204ENST00000548015 PNPLA7Q6ZV29 1317 aa15.28■□□□□ 0.04
KRT18-204ENST00000548015 RAPGEF4Q8WZA2 1011 aa15.28■□□□□ 0.04
KRT18-204ENST00000548015 WNK3Q9BYP7 1800 aa15.27■□□□□ 0.04
KRT18-204ENST00000548015 SLC16A10Q8TF71 515 aa15.27■□□□□ 0.04
KRT18-204ENST00000548015 EMILIN1Q9Y6C2 1016 aa15.27■□□□□ 0.04
KRT18-204ENST00000548015 CYP27B1O15528 508 aa15.26■□□□□ 0.03
KRT18-204ENST00000548015 TATP17735 454 aaPredicted RBP15.26■□□□□ 0.03
KRT18-204ENST00000548015 TFCP2L1Q9NZI6 479 aa15.26■□□□□ 0.03
KRT18-204ENST00000548015 CCNL1Q9UK58 526 aaPredicted RBP15.26■□□□□ 0.03
KRT18-204ENST00000548015 NHSQ6T4R5 1651 aa15.25■□□□□ 0.03
KRT18-204ENST00000548015 FLT4P35916 1363 aa15.25■□□□□ 0.03
KRT18-204ENST00000548015 KIF24Q5T7B8 1368 aa15.24■□□□□ 0.03
KRT18-204ENST00000548015 NSD3Q9BZ95 1437 aa15.24■□□□□ 0.03
KRT18-204ENST00000548015 PAPPAQ13219 1627 aa15.24■□□□□ 0.03
KRT18-204ENST00000548015 MAP3K5Q99683 1374 aa15.24■□□□□ 0.03
KRT18-204ENST00000548015 COL23A1Q86Y22 540 aaPredicted RBP15.23■□□□□ 0.03
KRT18-204ENST00000548015 PCGF6Q9BYE7 350 aa15.23■□□□□ 0.03
KRT18-204ENST00000548015 PPM1GO15355 546 aaPredicted RBP15.22■□□□□ 0.03
KRT18-204ENST00000548015 POLKQ9UBT6 870 aa15.22■□□□□ 0.03
KRT18-204ENST00000548015 LTN1O94822 1766 aa15.21■□□□□ 0.03
KRT18-204ENST00000548015 WASHC2AQ641Q2 1341 aa15.21■□□□□ 0.03
KRT18-204ENST00000548015 CLSPNQ9HAW4 1339 aa15.21■□□□□ 0.03
KRT18-204ENST00000548015 SMG6Q86US8 1419 aaKnown RBP15.21■□□□□ 0.03
KRT18-204ENST00000548015 EYA1Q99502 592 aa15.21■□□□□ 0.03
KRT18-204ENST00000548015 FAM208AQ9UK61 1670 aaKnown RBP15.21■□□□□ 0.03
KRT18-204ENST00000548015 PCDH11XQ9BZA7 1347 aa15.2■□□□□ 0.02
KRT18-204ENST00000548015 PCDH11YQ9BZA8 1340 aa15.2■□□□□ 0.02
KRT18-204ENST00000548015 POLD1P28340 1107 aa15.2■□□□□ 0.02
KRT18-204ENST00000548015 NKX1-1Q15270 411 aaPredicted RBP15.2■□□□□ 0.02
KRT18-204ENST00000548015 MPRIPQ6WCQ1 1025 aa15.2■□□□□ 0.02
KRT18-204ENST00000548015 ZNF784Q8NCA9 323 aaPredicted RBP15.2■□□□□ 0.02
KRT18-204ENST00000548015 PIGBQ92521 554 aa15.19■□□□□ 0.02
KRT18-204ENST00000548015 MYOM1P52179 1685 aa15.19■□□□□ 0.02
KRT18-204ENST00000548015 NLGN2Q8NFZ4 835 aa15.18■□□□□ 0.02
KRT18-204ENST00000548015 GOLGB1Q14789 3259 aaKnown RBP15.18■□□□□ 0.02
KRT18-204ENST00000548015 NCAPD2Q15021 1401 aa15.17■□□□□ 0.02
KRT18-204ENST00000548015 BTAF1O14981 1849 aa15.17■□□□□ 0.02
KRT18-204ENST00000548015 AMIGO3Q86WK7 504 aa15.17■□□□□ 0.02
KRT18-204ENST00000548015 POLR3GLQ9BT43 218 aa15.17■□□□□ 0.02
KRT18-204ENST00000548015 PALLDQ8WX93 1383 aa15.16■□□□□ 0.02
KRT18-204ENST00000548015 HSPA5P11021 654 aaKnown RBP15.16■□□□□ 0.02
KRT18-204ENST00000548015 GPR162Q16538 588 aa15.16■□□□□ 0.02
KRT18-204ENST00000548015 KLHL34Q8N239 644 aa15.16■□□□□ 0.02
KRT18-204ENST00000548015 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.16■□□□□ 0.02
KRT18-204ENST00000548015 TNNT2P45379 298 aaPredicted RBP15.15■□□□□ 0.02
KRT18-204ENST00000548015 EIF4A2Q14240 407 aaKnown RBP15.15■□□□□ 0.02
KRT18-204ENST00000548015 MSL1Q68DK7 614 aa15.15■□□□□ 0.02
KRT18-204ENST00000548015 SMIM5Q71RC9 77 aa15.15■□□□□ 0.02
KRT18-204ENST00000548015 SMARCC1Q92922 1105 aaPredicted RBP15.15■□□□□ 0.02
KRT18-204ENST00000548015 PANK3Q9H999 370 aa15.15■□□□□ 0.02
KRT18-204ENST00000548015 SPG7Q9UQ90 795 aa15.15■□□□□ 0.02
KRT18-204ENST00000548015 PHKG2P15735 406 aa15.13■□□□□ 0.01
KRT18-204ENST00000548015 EIF4G2P78344 907 aaKnown RBP eCLIP15.13■□□□□ 0.01
KRT18-204ENST00000548015 ASAP1Q9ULH1 1129 aa15.13■□□□□ 0.01
KRT18-204ENST00000548015 LOC102724428A0A0B4J2F2 783 aa15.12■□□□□ 0.01
KRT18-204ENST00000548015 SIK1P57059 783 aa15.12■□□□□ 0.01
KRT18-204ENST00000548015 FLAD1Q8NFF5 587 aa15.12■□□□□ 0.01
KRT18-204ENST00000548015 YBX3P16989 372 aaKnown RBP eCLIP15.11■□□□□ 0.012e-12■□□□□ 11.3
KRT18-204ENST00000548015 HMGB2P26583 209 aaKnown RBP15.11■□□□□ 0.01
KRT18-204ENST00000548015 IFNL2Q8IZJ0 200 aa15.11■□□□□ 0.01
KRT18-204ENST00000548015 LINC00116Q8NCU8 138 aa15.11■□□□□ 0.01
KRT18-204ENST00000548015 ATG3Q9NT62 314 aa15.11■□□□□ 0.01
KRT18-204ENST00000548015 ITPK1Q13572 414 aa15.1■□□□□ 0.01
KRT18-204ENST00000548015 PELP1Q8IZL8 1130 aaKnown RBP15.1■□□□□ 0.01
KRT18-204ENST00000548015 TMOD3Q9NYL9 352 aa15.1■□□□□ 0.01
KRT18-204ENST00000548015 KAT6BQ8WYB5 2073 aa15.1■□□□□ 0.01
KRT18-204ENST00000548015 SHANK3Q9BYB0 1731 aa15.09■□□□□ 0.01
KRT18-204ENST00000548015 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.09■□□□□ 0.01
KRT18-204ENST00000548015 AK7Q96M32 723 aa15.09■□□□□ 0.01
KRT18-204ENST00000548015 CD2APQ9Y5K6 639 aa15.09■□□□□ 0.01
KRT18-204ENST00000548015 IGSF1Q8N6C5 1336 aa15.09■□□□□ 0.01
KRT18-204ENST00000548015 RGPD2P0DJD1 1756 aa15.08■□□□□ 0.01
KRT18-204ENST00000548015 DOT1LQ8TEK3 1739 aa15.07■□□□□ 0
KRT18-204ENST00000548015 PHF14O94880 888 aa15.07■□□□□ 0
KRT18-204ENST00000548015 SLC4A9Q96Q91 983 aa15.07■□□□□ 0
KRT18-204ENST00000548015 GRIN3BO60391 1043 aa15.06■□□□□ 0
KRT18-204ENST00000548015 SSFA2P28290 1259 aa15.06■□□□□ 0
KRT18-204ENST00000548015 ATP6V1AP38606 617 aa15.06■□□□□ 0
KRT18-204ENST00000548015 CCER1Q8TC90 406 aaPredicted RBP15.06■□□□□ 0
KRT18-204ENST00000548015 ERVV-2B6SEH9 535 aa15.05■□□□□ -0
KRT18-204ENST00000548015 PLEKHO1Q53GL0 409 aaPredicted RBP15.05■□□□□ -0
KRT18-204ENST00000548015 MORC1Q86VD1 984 aa15.05■□□□□ -0
KRT18-204ENST00000548015 AEBP1Q8IUX7 1158 aa15.05■□□□□ -0
KRT18-204ENST00000548015 LY75O60449 1722 aa15.04■□□□□ -0
KRT18-204ENST00000548015 GNPATO15228 680 aa15.04■□□□□ -0
KRT18-204ENST00000548015 C1QTNF8P60827 252 aa15.04■□□□□ -0
KRT18-204ENST00000548015 AMER1Q5JTC6 1135 aaPredicted RBP15.03■□□□□ -0
KRT18-204ENST00000548015 DCAF5Q96JK2 942 aa15.03■□□□□ -0
KRT18-204ENST00000548015 PLEKHG2Q9H7P9 1386 aa15.02■□□□□ -0
KRT18-204ENST00000548015 HSP90AB1P08238 724 aaKnown RBP15.02■□□□□ -0
KRT18-204ENST00000548015 IL13P35225 146 aa15.02■□□□□ -0
KRT18-204ENST00000548015 ZNF530Q6P9A1 599 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms