RNA–Protein interactions for RNA: ENST00000547905.5

RACGAP1-209, Transcript of Rac GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACGAP1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-209ENST00000547905 TGFB2P61812 414 aa13.42□□□□□ -0.26
RACGAP1-209ENST00000547905 TNRC6CQ9HCJ0 1690 aaKnown RBP13.41□□□□□ -0.26
RACGAP1-209ENST00000547905 ZNF692Q9BU19 519 aaPredicted RBP13.41□□□□□ -0.26
RACGAP1-209ENST00000547905 CCNL1Q9UK58 526 aaPredicted RBP13.41□□□□□ -0.26
RACGAP1-209ENST00000547905 MSH5O43196 834 aa13.41□□□□□ -0.26
RACGAP1-209ENST00000547905 RGS19P49795 217 aa13.41□□□□□ -0.26
RACGAP1-209ENST00000547905 NMRK2Q9NPI5 230 aa13.41□□□□□ -0.26
RACGAP1-209ENST00000547905 ZBTB7CA1YPR0 619 aa13.4□□□□□ -0.26
RACGAP1-209ENST00000547905 USP54Q70EL1 1684 aa13.39□□□□□ -0.27
RACGAP1-209ENST00000547905 NFAT5O94916 1531 aa13.38□□□□□ -0.27
RACGAP1-209ENST00000547905 CEP350Q5VT06 3117 aa13.37□□□□□ -0.27
RACGAP1-209ENST00000547905 ERBB3P21860 1342 aa13.37□□□□□ -0.27
RACGAP1-209ENST00000547905 KIF13BQ9NQT8 1826 aa13.37□□□□□ -0.27
RACGAP1-209ENST00000547905 NSD2O96028 1365 aa13.37□□□□□ -0.27
RACGAP1-209ENST00000547905 RGPD5Q99666 1765 aa13.36□□□□□ -0.27
RACGAP1-209ENST00000547905 USP47Q96K76 1375 aa13.36□□□□□ -0.27
RACGAP1-209ENST00000547905 CTCFP49711 727 aaPredicted RBP13.35□□□□□ -0.27
RACGAP1-209ENST00000547905 FAM208AQ9UK61 1670 aaKnown RBP13.35□□□□□ -0.27
RACGAP1-209ENST00000547905 KIAA1210Q9ULL0 1709 aa13.35□□□□□ -0.27
RACGAP1-209ENST00000547905 MLLT1Q03111 559 aaPredicted RBP13.35□□□□□ -0.27
RACGAP1-209ENST00000547905 MSL1Q68DK7 614 aa13.34□□□□□ -0.27
RACGAP1-209ENST00000547905 NLRP2Q9NX02 1062 aa13.34□□□□□ -0.27
RACGAP1-209ENST00000547905 C5P01031 1676 aa13.34□□□□□ -0.27
RACGAP1-209ENST00000547905 USP31Q70CQ4 1352 aa13.34□□□□□ -0.27
RACGAP1-209ENST00000547905 PKD1L3Q7Z443 1732 aa13.33□□□□□ -0.28
RACGAP1-209ENST00000547905 SSFA2P28290 1259 aa13.33□□□□□ -0.28
RACGAP1-209ENST00000547905 PRIM1P49642 420 aaKnown RBP13.33□□□□□ -0.28
RACGAP1-209ENST00000547905 HTRA3P83110 453 aa13.33□□□□□ -0.28
RACGAP1-209ENST00000547905 TTC21BQ7Z4L5 1316 aa13.33□□□□□ -0.28
RACGAP1-209ENST00000547905 SRPK2P78362 688 aaKnown RBP13.32□□□□□ -0.28
RACGAP1-209ENST00000547905 ARHGAP27Q6ZUM4 889 aa13.32□□□□□ -0.28
RACGAP1-209ENST00000547905 CGNL1Q0VF96 1302 aa13.32□□□□□ -0.28
RACGAP1-209ENST00000547905 FAM161AQ3B820 660 aa13.31□□□□□ -0.28
RACGAP1-209ENST00000547905 C9orf131Q5VYM1 1079 aa13.31□□□□□ -0.28
RACGAP1-209ENST00000547905 SMARCC1Q92922 1105 aaPredicted RBP13.31□□□□□ -0.28
RACGAP1-209ENST00000547905 AIDAQ96BJ3 306 aa13.31□□□□□ -0.28
RACGAP1-209ENST00000547905 CREBZFQ9NS37 354 aa13.3□□□□□ -0.28
RACGAP1-209ENST00000547905 KIAA1551Q9HCM1 1747 aa13.3□□□□□ -0.28
RACGAP1-209ENST00000547905 ARFGEF1Q9Y6D6 1849 aa13.29□□□□□ -0.28
RACGAP1-209ENST00000547905 DOT1LQ8TEK3 1739 aa13.29□□□□□ -0.28
RACGAP1-209ENST00000547905 RRAGCQ9HB90 399 aa13.29□□□□□ -0.28
RACGAP1-209ENST00000547905 CABP1Q9NZU7 370 aa13.29□□□□□ -0.28
RACGAP1-209ENST00000547905 KAT6BQ8WYB5 2073 aa13.28□□□□□ -0.28
RACGAP1-209ENST00000547905 VEGFAP15692 232 aaPredicted RBP13.28□□□□□ -0.28
RACGAP1-209ENST00000547905 ABHD8Q96I13 439 aa13.28□□□□□ -0.28
RACGAP1-209ENST00000547905 AK7Q96M32 723 aa13.28□□□□□ -0.28
RACGAP1-209ENST00000547905 KCPQ6ZWJ8 1503 aa13.28□□□□□ -0.28
RACGAP1-209ENST00000547905 ANKRD24Q8TF21 1146 aa13.28□□□□□ -0.28
RACGAP1-209ENST00000547905 BCS1LQ9Y276 419 aa13.28□□□□□ -0.28
RACGAP1-209ENST00000547905 TAF1LQ8IZX4 1826 aa13.28□□□□□ -0.28
RACGAP1-209ENST00000547905 C4BP0C0L5 1744 aa13.27□□□□□ -0.28
RACGAP1-209ENST00000547905 DDX54Q8TDD1 881 aaKnown RBP13.27□□□□□ -0.29
RACGAP1-209ENST00000547905 CENPJQ9HC77 1338 aaPredicted RBP13.26□□□□□ -0.29
RACGAP1-209ENST00000547905 ZCRB1Q8TBF4 217 aaKnown RBP13.26□□□□□ -0.29
RACGAP1-209ENST00000547905 DCAF11Q8TEB1 546 aa13.26□□□□□ -0.29
RACGAP1-209ENST00000547905 SYTL4Q96C24 671 aaPredicted RBP13.26□□□□□ -0.29
RACGAP1-209ENST00000547905 DCAF5Q96JK2 942 aa13.26□□□□□ -0.29
RACGAP1-209ENST00000547905 CCDC87Q9NVE4 849 aa13.26□□□□□ -0.29
RACGAP1-209ENST00000547905 FOXN1O15353 648 aa13.25□□□□□ -0.29
RACGAP1-209ENST00000547905 FCHSD2O94868 740 aa13.25□□□□□ -0.29
RACGAP1-209ENST00000547905 KCNQ4P56696 695 aa13.24□□□□□ -0.29
RACGAP1-209ENST00000547905 NLGN1Q8N2Q7 840 aa13.24□□□□□ -0.29
RACGAP1-209ENST00000547905 UBR3Q6ZT12 1888 aa13.24□□□□□ -0.29
RACGAP1-209ENST00000547905 KDM6AO15550 1401 aaPredicted RBP13.24□□□□□ -0.29
RACGAP1-209ENST00000547905 CABP2Q9NPB3 220 aa13.24□□□□□ -0.29
RACGAP1-209ENST00000547905 CNTNAP1P78357 1384 aa13.24□□□□□ -0.29
RACGAP1-209ENST00000547905 PALLDQ8WX93 1383 aa13.24□□□□□ -0.29
RACGAP1-209ENST00000547905 EVC2Q86UK5 1308 aa13.23□□□□□ -0.29
RACGAP1-209ENST00000547905 BRCA1P38398 1863 aaKnown RBP13.23□□□□□ -0.29
RACGAP1-209ENST00000547905 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.22□□□□□ -0.29
RACGAP1-209ENST00000547905 IP6K1Q92551 441 aa13.22□□□□□ -0.29
RACGAP1-209ENST00000547905 RNF181Q9P0P0 153 aa13.22□□□□□ -0.29
RACGAP1-209ENST00000547905 PIM2Q9P1W9 311 aa13.22□□□□□ -0.29
RACGAP1-209ENST00000547905 TOGARAM1Q9Y4F4 1720 aa13.22□□□□□ -0.29
RACGAP1-209ENST00000547905 GLTPD2A6NH11 291 aa13.22□□□□□ -0.29
RACGAP1-209ENST00000547905 WBP1LQ9NX94 342 aa13.21□□□□□ -0.29
RACGAP1-209ENST00000547905 ADRA2BP18089 450 aa13.21□□□□□ -0.3
RACGAP1-209ENST00000547905 KDM2AQ9Y2K7 1162 aa13.21□□□□□ -0.3
RACGAP1-209ENST00000547905 DALRD3Q5D0E6 543 aaKnown RBP13.2□□□□□ -0.3
RACGAP1-209ENST00000547905 MMP10P09238 476 aa13.2□□□□□ -0.3
RACGAP1-209ENST00000547905 DPEP1P16444 411 aa13.2□□□□□ -0.3
RACGAP1-209ENST00000547905 CLSPNQ9HAW4 1339 aa13.19□□□□□ -0.3
RACGAP1-209ENST00000547905 LTN1O94822 1766 aa13.19□□□□□ -0.3
RACGAP1-209ENST00000547905 DIEXFQ68CQ4 756 aaKnown RBP13.19□□□□□ -0.3
RACGAP1-209ENST00000547905 KTN1Q86UP2 1357 aaKnown RBP13.18□□□□□ -0.3
RACGAP1-209ENST00000547905 A0A0G2JLW4 131 aa13.18□□□□□ -0.3
RACGAP1-209ENST00000547905 MON2Q7Z3U7 1717 aa13.18□□□□□ -0.3
RACGAP1-209ENST00000547905 N4BP2Q86UW6 1770 aaPredicted RBP13.18□□□□□ -0.3
RACGAP1-209ENST00000547905 ZNF316A6NFI3 1004 aaPredicted RBP13.17□□□□□ -0.3
RACGAP1-209ENST00000547905 MAP2K1Q02750 393 aaPredicted RBP13.17□□□□□ -0.3
RACGAP1-209ENST00000547905 CHADLQ6NUI6 762 aa13.17□□□□□ -0.3
RACGAP1-209ENST00000547905 C4AP0C0L4 1744 aa13.17□□□□□ -0.3
RACGAP1-209ENST00000547905 MAP3K19Q56UN5 1328 aa13.17□□□□□ -0.3
RACGAP1-209ENST00000547905 SMG6Q86US8 1419 aaKnown RBP13.17□□□□□ -0.3
RACGAP1-209ENST00000547905 TMF1P82094 1093 aa13.17□□□□□ -0.3
RACGAP1-209ENST00000547905 CD163L1Q9NR16 1453 aa13.16□□□□□ -0.3
RACGAP1-209ENST00000547905 HSPA8P11142 646 aaKnown RBP13.16□□□□□ -0.3
RACGAP1-209ENST00000547905 LMNB1P20700 586 aa13.16□□□□□ -0.3
RACGAP1-209ENST00000547905 KCNA3P22001 575 aa13.16□□□□□ -0.3
RACGAP1-209ENST00000547905 SBF1O95248 1867 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms