RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 ERVH48-1M5A8F1 160 aa6.29□□□□□ -1.4
DEPDC4-204ENST00000547823 LILRA1O75019 489 aa6.29□□□□□ -1.4
DEPDC4-204ENST00000547823 GAS6Q14393 721 aa6.29□□□□□ -1.4
DEPDC4-204ENST00000547823 BCRP11274 1271 aa6.28□□□□□ -1.4
DEPDC4-204ENST00000547823 ALYREFQ86V81 257 aaKnown RBP6.28□□□□□ -1.4
DEPDC4-204ENST00000547823 ZNF837Q96EG3 531 aaPredicted RBP6.28□□□□□ -1.4
DEPDC4-204ENST00000547823 DDRGK1Q96HY6 314 aa6.28□□□□□ -1.4
DEPDC4-204ENST00000547823 OCSTAMPQ9BR26 566 aa6.28□□□□□ -1.4
DEPDC4-204ENST00000547823 TMPRSS4Q9NRS4 437 aa6.28□□□□□ -1.4
DEPDC4-204ENST00000547823 NEDD1Q8NHV4 660 aa6.27□□□□□ -1.41
DEPDC4-204ENST00000547823 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.27□□□□□ -1.41
DEPDC4-204ENST00000547823 DYRK1BQ9Y463 629 aa6.27□□□□□ -1.41
DEPDC4-204ENST00000547823 ATP5J2-PTCD1G3V325 749 aa6.26□□□□□ -1.41
DEPDC4-204ENST00000547823 AP1G2O75843 785 aa6.26□□□□□ -1.41
DEPDC4-204ENST00000547823 RAB15P59190 212 aa6.26□□□□□ -1.41
DEPDC4-204ENST00000547823 PLA2G4EQ3MJ16 856 aa6.26□□□□□ -1.41
DEPDC4-204ENST00000547823 WDR44Q5JSH3 913 aa6.26□□□□□ -1.41
DEPDC4-204ENST00000547823 DCAF5Q96JK2 942 aa6.26□□□□□ -1.41
DEPDC4-204ENST00000547823 SLC24A3Q9HC58 644 aa6.26□□□□□ -1.41
DEPDC4-204ENST00000547823 IGF1RP08069 1367 aa6.26□□□□□ -1.41
DEPDC4-204ENST00000547823 ADAM23O75077 832 aa6.25□□□□□ -1.41
DEPDC4-204ENST00000547823 ADD1P35611 737 aaKnown RBP6.25□□□□□ -1.41
DEPDC4-204ENST00000547823 MCCD1P59942 119 aaPredicted RBP6.25□□□□□ -1.41
DEPDC4-204ENST00000547823 RNF20Q5VTR2 975 aa6.25□□□□□ -1.41
DEPDC4-204ENST00000547823 PRICKLE2Q7Z3G6 844 aa6.25□□□□□ -1.41
DEPDC4-204ENST00000547823 KDF1Q8NAX2 398 aaPredicted RBP6.25□□□□□ -1.41
DEPDC4-204ENST00000547823 GALNT6Q8NCL4 622 aa6.25□□□□□ -1.41
DEPDC4-204ENST00000547823 CUEDC1Q9NWM3 386 aaPredicted RBP6.25□□□□□ -1.41
DEPDC4-204ENST00000547823 ATP1B4Q9UN42 357 aaPredicted RBP6.25□□□□□ -1.41
DEPDC4-204ENST00000547823 USP17L8P0C7I0 530 aa6.24□□□□□ -1.41
DEPDC4-204ENST00000547823 MAP2K3P46734 347 aa6.24□□□□□ -1.41
DEPDC4-204ENST00000547823 RIPOR1Q6ZS17 1223 aa6.24□□□□□ -1.41
DEPDC4-204ENST00000547823 SPOCK3Q9BQ16 436 aa6.24□□□□□ -1.41
DEPDC4-204ENST00000547823 CYLDQ9NQC7 956 aa6.24□□□□□ -1.41
DEPDC4-204ENST00000547823 MX2P20592 715 aa6.23□□□□□ -1.41
DEPDC4-204ENST00000547823 CYP2U1Q7Z449 544 aa6.23□□□□□ -1.41
DEPDC4-204ENST00000547823 NLRP3Q96P20 1036 aa6.23□□□□□ -1.41
DEPDC4-204ENST00000547823 MEN1O00255 615 aa6.22□□□□□ -1.41
DEPDC4-204ENST00000547823 PIK3R2O00459 728 aa6.22□□□□□ -1.41
DEPDC4-204ENST00000547823 RHOQP17081 205 aa6.22□□□□□ -1.41
DEPDC4-204ENST00000547823 SLC27A3Q5K4L6 730 aa6.22□□□□□ -1.41
DEPDC4-204ENST00000547823 CC2D2BQ6DHV5 1058 aa6.22□□□□□ -1.41
DEPDC4-204ENST00000547823 PHF24Q9UPV7 400 aa6.22□□□□□ -1.41
DEPDC4-204ENST00000547823 ZBBXA8MT70 800 aa6.21□□□□□ -1.42
DEPDC4-204ENST00000547823 SPATA31C2B4DYI2 1134 aa6.21□□□□□ -1.42
DEPDC4-204ENST00000547823 OIP5O43482 229 aa6.21□□□□□ -1.42
DEPDC4-204ENST00000547823 ERVK-9P63128 1117 aa6.21□□□□□ -1.42
DEPDC4-204ENST00000547823 DBN1Q16643 649 aa6.21□□□□□ -1.42
DEPDC4-204ENST00000547823 GTPBP3Q969Y2 492 aaKnown RBP6.21□□□□□ -1.42
DEPDC4-204ENST00000547823 ACDQ96AP0 544 aa6.21□□□□□ -1.42
DEPDC4-204ENST00000547823 CFHR5Q9BXR6 569 aa6.21□□□□□ -1.42
DEPDC4-204ENST00000547823 CNTNAP5Q8WYK1 1306 aa6.21□□□□□ -1.42
DEPDC4-204ENST00000547823 A0A1W2PRU2 124 aa6.2□□□□□ -1.42
DEPDC4-204ENST00000547823 CLN3Q13286 438 aa6.2□□□□□ -1.42
DEPDC4-204ENST00000547823 LBRQ14739 615 aaKnown RBP6.2□□□□□ -1.42
DEPDC4-204ENST00000547823 NBPF10Q6P3W6 841 aaKnown RBP6.2□□□□□ -1.42
DEPDC4-204ENST00000547823 NBPF15Q8N660 670 aa6.2□□□□□ -1.42
DEPDC4-204ENST00000547823 NUCKS1Q9H1E3 243 aaKnown RBP6.2□□□□□ -1.42
DEPDC4-204ENST00000547823 ESF1Q9H501 851 aaKnown RBP6.2□□□□□ -1.42
DEPDC4-204ENST00000547823 GDF2Q9UK05 429 aaPredicted RBP6.2□□□□□ -1.42
DEPDC4-204ENST00000547823 MKL2Q9ULH7 1088 aa6.2□□□□□ -1.42
DEPDC4-204ENST00000547823 ZNF330Q9Y3S2 320 aaPredicted RBP6.2□□□□□ -1.42
DEPDC4-204ENST00000547823 K7ELQ4 463 aaPredicted RBP6.19□□□□□ -1.42
DEPDC4-204ENST00000547823 GPR25O00155 361 aa6.19□□□□□ -1.42
DEPDC4-204ENST00000547823 F11P03951 625 aa6.19□□□□□ -1.42
DEPDC4-204ENST00000547823 PROCP04070 461 aa6.19□□□□□ -1.42
DEPDC4-204ENST00000547823 TMEM259Q4ZIN3 620 aa6.19□□□□□ -1.42
DEPDC4-204ENST00000547823 PROCA1Q8NCQ7 364 aaPredicted RBP6.19□□□□□ -1.42
DEPDC4-204ENST00000547823 GAS2L1Q99501 681 aaPredicted RBP6.19□□□□□ -1.42
DEPDC4-204ENST00000547823 OXCT2Q9BYC2 517 aaPredicted RBP6.19□□□□□ -1.42
DEPDC4-204ENST00000547823 HMX1Q9NP08 348 aaPredicted RBP6.19□□□□□ -1.42
DEPDC4-204ENST00000547823 PCDHB9Q9Y5E1 797 aa6.19□□□□□ -1.42
DEPDC4-204ENST00000547823 XP32Q5T750 250 aa6.18□□□□□ -1.42
DEPDC4-204ENST00000547823 TAS1R3Q7RTX0 852 aa6.18□□□□□ -1.42
DEPDC4-204ENST00000547823 GRIP2Q9C0E4 1043 aa6.18□□□□□ -1.42
DEPDC4-204ENST00000547823 KDM4CQ9H3R0 1056 aa6.18□□□□□ -1.42
DEPDC4-204ENST00000547823 TIMMDC1Q9NPL8 285 aa6.18□□□□□ -1.42
DEPDC4-204ENST00000547823 WASLO00401 505 aaPredicted RBP6.17□□□□□ -1.42
DEPDC4-204ENST00000547823 GIGYF1O75420 1035 aaPredicted RBP6.17□□□□□ -1.42
DEPDC4-204ENST00000547823 RFC5P40937 340 aa6.17□□□□□ -1.42
DEPDC4-204ENST00000547823 POU4F2Q12837 409 aa6.17□□□□□ -1.42
DEPDC4-204ENST00000547823 EPS8L1Q8TE68 723 aa6.17□□□□□ -1.42
DEPDC4-204ENST00000547823 GTF2E1P29083 439 aaPredicted RBP6.16□□□□□ -1.42
DEPDC4-204ENST00000547823 GOLGA6L1Q8N7Z2 621 aa6.16□□□□□ -1.42
DEPDC4-204ENST00000547823 GOPCQ9HD26 462 aa6.16□□□□□ -1.42
DEPDC4-204ENST00000547823 A0A1B0GTH6 734 aa6.15□□□□□ -1.42
DEPDC4-204ENST00000547823 GNRH1P01148 92 aa6.15□□□□□ -1.42
DEPDC4-204ENST00000547823 ITGB2P05107 769 aa6.15□□□□□ -1.42
DEPDC4-204ENST00000547823 FBXO31Q5XUX0 539 aaPredicted RBP6.15□□□□□ -1.42
DEPDC4-204ENST00000547823 SOCS7O14512 581 aa6.14□□□□□ -1.43
DEPDC4-204ENST00000547823 CSB-PGBD3P0DP91 1061 aa6.14□□□□□ -1.43
DEPDC4-204ENST00000547823 PGBD3Q8N328 593 aa6.14□□□□□ -1.43
DEPDC4-204ENST00000547823 TRIM34Q9BYJ4 488 aa6.14□□□□□ -1.43
DEPDC4-204ENST00000547823 FAM117AQ9C073 453 aa6.14□□□□□ -1.43
DEPDC4-204ENST00000547823 APBB1O00213 710 aa6.13□□□□□ -1.43
DEPDC4-204ENST00000547823 TRAK2O60296 914 aa6.13□□□□□ -1.43
DEPDC4-204ENST00000547823 FBXO45P0C2W1 286 aa6.13□□□□□ -1.43
DEPDC4-204ENST00000547823 BAG6P46379 1132 aa6.13□□□□□ -1.43
DEPDC4-204ENST00000547823 NR1H3Q13133 447 aa6.13□□□□□ -1.43
DEPDC4-204ENST00000547823 GNASQ5JWF2 1037 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms