RNA–Protein interactions for RNA: ENST00000547630.1

C12orf49-203, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 1 (best)

Gene C12orf49, Length 1,371 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-203ENST00000547630 AEBP1Q8IUX7 1158 aa27.61■■■□□ 2.01
C12orf49-203ENST00000547630 MYBBP1AQ9BQG0 1328 aaKnown RBP27.61■■■□□ 2.01
C12orf49-203ENST00000547630 DDX54Q8TDD1 881 aaKnown RBP27.6■■■□□ 2.01
C12orf49-203ENST00000547630 U2SURPO15042 1029 aaKnown RBP27.6■■■□□ 2.01
C12orf49-203ENST00000547630 EP400Q96L91 3159 aa27.59■■■□□ 2.01
C12orf49-203ENST00000547630 HMOX1P09601 288 aa27.58■■■□□ 2.01
C12orf49-203ENST00000547630 SHANK3Q9BYB0 1731 aa27.57■■■□□ 2
C12orf49-203ENST00000547630 KDRP35968 1356 aa27.57■■■□□ 2
C12orf49-203ENST00000547630 NUDCQ9Y266 331 aa27.56■■■□□ 2
C12orf49-203ENST00000547630 PKD1L3Q7Z443 1732 aa27.55■■■□□ 2
C12orf49-203ENST00000547630 SPG7Q9UQ90 795 aa27.54■■■□□ 2
C12orf49-203ENST00000547630 TRIM37O94972 964 aa27.53■■■□□ 2
C12orf49-203ENST00000547630 PCDH11XQ9BZA7 1347 aa27.53■■■□□ 2
C12orf49-203ENST00000547630 PCDH11YQ9BZA8 1340 aa27.53■■■□□ 2
C12orf49-203ENST00000547630 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.52■■■□□ 2
C12orf49-203ENST00000547630 CCDC125Q86Z20 511 aa27.51■■□□□ 1.99
C12orf49-203ENST00000547630 BCL9O00512 1426 aa27.51■■□□□ 1.99
C12orf49-203ENST00000547630 CYP27B1O15528 508 aa27.5■■□□□ 1.99
C12orf49-203ENST00000547630 ANP32CO43423 234 aa27.5■■□□□ 1.99
C12orf49-203ENST00000547630 PLEKHG2Q9H7P9 1386 aa27.5■■□□□ 1.99
C12orf49-203ENST00000547630 U2AF1L5P0DN76 240 aaPredicted RBP27.49■■□□□ 1.99
C12orf49-203ENST00000547630 U2AF1Q01081 240 aaKnown RBP eCLIP27.49■■□□□ 1.99
C12orf49-203ENST00000547630 SF3B2Q13435 895 aaKnown RBP27.49■■□□□ 1.99
C12orf49-203ENST00000547630 PLEKHO1Q53GL0 409 aaPredicted RBP27.49■■□□□ 1.99
C12orf49-203ENST00000547630 ACSBG1Q96GR2 724 aa27.49■■□□□ 1.99
C12orf49-203ENST00000547630 SBF2Q86WG5 1849 aa27.49■■□□□ 1.99
C12orf49-203ENST00000547630 AMOTQ4VCS5 1084 aa27.47■■□□□ 1.99
C12orf49-203ENST00000547630 TNS1Q9HBL0 1735 aaKnown RBP27.45■■□□□ 1.98
C12orf49-203ENST00000547630 PTF1AQ7RTS3 328 aa27.45■■□□□ 1.98
C12orf49-203ENST00000547630 IFNL2Q8IZJ0 200 aa27.45■■□□□ 1.98
C12orf49-203ENST00000547630 KCNQ2O43526 872 aa27.44■■□□□ 1.98
C12orf49-203ENST00000547630 PHKG2P15735 406 aa27.44■■□□□ 1.98
C12orf49-203ENST00000547630 ZNF530Q6P9A1 599 aaPredicted RBP27.44■■□□□ 1.98
C12orf49-203ENST00000547630 RSPH6AQ9H0K4 717 aa27.44■■□□□ 1.98
C12orf49-203ENST00000547630 BCL11BQ9C0K0 894 aaPredicted RBP27.43■■□□□ 1.98
C12orf49-203ENST00000547630 KAT6BQ8WYB5 2073 aa27.42■■□□□ 1.98
C12orf49-203ENST00000547630 APBA3O96018 575 aa27.42■■□□□ 1.98
C12orf49-203ENST00000547630 PRKAR2BP31323 418 aa27.42■■□□□ 1.98
C12orf49-203ENST00000547630 DEFB132Q7Z7B7 95 aa27.42■■□□□ 1.98
C12orf49-203ENST00000547630 DOT1LQ8TEK3 1739 aa27.41■■□□□ 1.98
C12orf49-203ENST00000547630 NHSQ6T4R5 1651 aa27.41■■□□□ 1.98
C12orf49-203ENST00000547630 FCHSD2O94868 740 aa27.4■■□□□ 1.98
C12orf49-203ENST00000547630 BAG6P46379 1132 aa27.4■■□□□ 1.98
C12orf49-203ENST00000547630 NKX1-1Q15270 411 aaPredicted RBP27.4■■□□□ 1.98
C12orf49-203ENST00000547630 PRIM1P49642 420 aaKnown RBP27.39■■□□□ 1.98
C12orf49-203ENST00000547630 C1orf141Q5JVX7 400 aa27.39■■□□□ 1.98
C12orf49-203ENST00000547630 SYTL4Q96C24 671 aaPredicted RBP27.39■■□□□ 1.98
C12orf49-203ENST00000547630 MTHFSDQ2M296 383 aaKnown RBP27.38■■□□□ 1.97
C12orf49-203ENST00000547630 EN1Q05925 392 aaPredicted RBP27.37■■□□□ 1.97
C12orf49-203ENST00000547630 PHACTR3Q96KR7 559 aa27.36■■□□□ 1.97
C12orf49-203ENST00000547630 CCDC184Q52MB2 194 aa27.35■■□□□ 1.97
C12orf49-203ENST00000547630 TOGARAM1Q9Y4F4 1720 aa27.35■■□□□ 1.97
C12orf49-203ENST00000547630 HSP90AB1P08238 724 aaKnown RBP27.35■■□□□ 1.97
C12orf49-203ENST00000547630 AKAP4Q5JQC9 854 aa27.35■■□□□ 1.97
C12orf49-203ENST00000547630 WDR43Q15061 677 aaKnown RBP eCLIP27.34■■□□□ 1.97
C12orf49-203ENST00000547630 GAS2L2Q8NHY3 880 aa27.33■■□□□ 1.97
C12orf49-203ENST00000547630 DCAF5Q96JK2 942 aa27.33■■□□□ 1.97
C12orf49-203ENST00000547630 BTAF1O14981 1849 aa27.32■■□□□ 1.96
C12orf49-203ENST00000547630 EZH2Q15910 746 aaKnown RBP27.32■■□□□ 1.96
C12orf49-203ENST00000547630 MPRIPQ6WCQ1 1025 aa27.32■■□□□ 1.96
C12orf49-203ENST00000547630 CAMKK2Q96RR4 588 aa27.31■■□□□ 1.96
C12orf49-203ENST00000547630 KDM6AO15550 1401 aaPredicted RBP27.3■■□□□ 1.96
C12orf49-203ENST00000547630 PLEKHF1Q96S99 279 aa27.3■■□□□ 1.96
C12orf49-203ENST00000547630 ITGB4P16144 1822 aa27.29■■□□□ 1.96
C12orf49-203ENST00000547630 PLSCR1O15162 318 aa27.29■■□□□ 1.96
C12orf49-203ENST00000547630 NEFMP07197 916 aa27.29■■□□□ 1.96
C12orf49-203ENST00000547630 PNNQ9H307 717 aaKnown RBP27.29■■□□□ 1.96
C12orf49-203ENST00000547630 MRS2Q9HD23 443 aa27.27■■□□□ 1.96
C12orf49-203ENST00000547630 ADAMTS8Q9UP79 889 aa27.27■■□□□ 1.96
C12orf49-203ENST00000547630 ERVV-2B6SEH9 535 aa27.26■■□□□ 1.95
C12orf49-203ENST00000547630 PIGBQ92521 554 aa27.26■■□□□ 1.95
C12orf49-203ENST00000547630 LGR6Q9HBX8 967 aa27.26■■□□□ 1.95
C12orf49-203ENST00000547630 TMOD3Q9NYL9 352 aa27.26■■□□□ 1.95
C12orf49-203ENST00000547630 MAP3K5Q99683 1374 aa27.26■■□□□ 1.95
C12orf49-203ENST00000547630 GNAT3A8MTJ3 354 aa27.25■■□□□ 1.95
C12orf49-203ENST00000547630 RNMTO43148 476 aaKnown RBP27.25■■□□□ 1.95
C12orf49-203ENST00000547630 DIEXFQ68CQ4 756 aaKnown RBP27.24■■□□□ 1.95
C12orf49-203ENST00000547630 SCN11AQ9UI33 1791 aa27.24■■□□□ 1.95
C12orf49-203ENST00000547630 MAPK8IP3Q9UPT6 1336 aa27.24■■□□□ 1.95
C12orf49-203ENST00000547630 RGPD3A6NKT7 1758 aaPredicted RBP27.24■■□□□ 1.95
C12orf49-203ENST00000547630 RGPD4Q7Z3J3 1758 aa27.24■■□□□ 1.95
C12orf49-203ENST00000547630 CABP4P57796 275 aa27.23■■□□□ 1.95
C12orf49-203ENST00000547630 CCDC146Q8IYE0 955 aa27.22■■□□□ 1.95
C12orf49-203ENST00000547630 PROM2Q8N271 834 aa27.22■■□□□ 1.95
C12orf49-203ENST00000547630 VIRMAQ69YN4 1812 aaKnown RBP27.21■■□□□ 1.95
C12orf49-203ENST00000547630 TXNRD1Q16881 649 aa27.21■■□□□ 1.95
C12orf49-203ENST00000547630 RREB1Q92766 1687 aa27.2■■□□□ 1.95
C12orf49-203ENST00000547630 NFATC2IPQ8NCF5 419 aa27.2■■□□□ 1.94
C12orf49-203ENST00000547630 IL17REQ8NFR9 667 aa27.2■■□□□ 1.94
C12orf49-203ENST00000547630 ADAMTS7Q9UKP4 1686 aa27.2■■□□□ 1.94
C12orf49-203ENST00000547630 NFE2L2Q16236 605 aa27.19■■□□□ 1.94
C12orf49-203ENST00000547630 PNISRQ8TF01 805 aaKnown RBP27.19■■□□□ 1.94
C12orf49-203ENST00000547630 RUNDC1Q96C34 613 aa27.19■■□□□ 1.94
C12orf49-203ENST00000547630 SLC52A2Q9HAB3 445 aa27.18■■□□□ 1.94
C12orf49-203ENST00000547630 RTF1Q92541 710 aaKnown RBP27.17■■□□□ 1.94
C12orf49-203ENST00000547630 ASAP1Q9ULH1 1129 aa27.17■■□□□ 1.94
C12orf49-203ENST00000547630 PALLDQ8WX93 1383 aa27.16■■□□□ 1.94
C12orf49-203ENST00000547630 SMARCC1Q92922 1105 aaPredicted RBP27.16■■□□□ 1.94
C12orf49-203ENST00000547630 NUP188Q5SRE5 1749 aa27.15■■□□□ 1.94
C12orf49-203ENST00000547630 ATG3Q9NT62 314 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms