RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 FLT4P35916 1363 aa21.64■■□□□ 1.05
LETMD1-210ENST00000547555 CHRNA2Q15822 529 aa21.63■■□□□ 1.05
LETMD1-210ENST00000547555 IP6K1Q92551 441 aa21.63■■□□□ 1.05
LETMD1-210ENST00000547555 HOXC9P31274 260 aa21.62■■□□□ 1.05
LETMD1-210ENST00000547555 SLC4A3P48751 1232 aa21.61■■□□□ 1.05
LETMD1-210ENST00000547555 AMPHP49418 695 aa21.61■■□□□ 1.05
LETMD1-210ENST00000547555 MEX3CQ5U5Q3 659 aaKnown RBP21.61■■□□□ 1.05
LETMD1-210ENST00000547555 COL5A2P05997 1499 aaPredicted RBP21.61■■□□□ 1.05
LETMD1-210ENST00000547555 FAM208AQ9UK61 1670 aaKnown RBP21.61■■□□□ 1.05
LETMD1-210ENST00000547555 RGS3P49796 1198 aa21.6■■□□□ 1.05
LETMD1-210ENST00000547555 MTHFSP49914 203 aa21.6■■□□□ 1.05
LETMD1-210ENST00000547555 FNBP4Q8N3X1 1017 aaPredicted RBP21.6■■□□□ 1.05
LETMD1-210ENST00000547555 C8orf37Q96NL8 207 aa21.6■■□□□ 1.05
LETMD1-210ENST00000547555 ANTXR1Q9H6X2 564 aa21.6■■□□□ 1.05
LETMD1-210ENST00000547555 ZBTB7CA1YPR0 619 aa21.6■■□□□ 1.05
LETMD1-210ENST00000547555 CT47B1P0C2W7 299 aaPredicted RBP21.6■■□□□ 1.05
LETMD1-210ENST00000547555 AXIN2Q9Y2T1 843 aa21.6■■□□□ 1.05
LETMD1-210ENST00000547555 COL3A1P02461 1466 aaPredicted RBP21.59■■□□□ 1.05
LETMD1-210ENST00000547555 BCL9LQ86UU0 1499 aa21.58■■□□□ 1.05
LETMD1-210ENST00000547555 CCDC27Q2M243 656 aa21.58■■□□□ 1.05
LETMD1-210ENST00000547555 TBC1D32Q96NH3 1257 aa21.58■■□□□ 1.05
LETMD1-210ENST00000547555 WDR63Q8IWG1 891 aa21.57■■□□□ 1.04
LETMD1-210ENST00000547555 NGLY1Q96IV0 654 aa21.57■■□□□ 1.04
LETMD1-210ENST00000547555 BTG4Q9NY30 223 aa21.57■■□□□ 1.04
LETMD1-210ENST00000547555 HSP90AB2PQ58FF8 381 aa21.56■■□□□ 1.04
LETMD1-210ENST00000547555 ERBB3P21860 1342 aa21.56■■□□□ 1.04
LETMD1-210ENST00000547555 PHF23Q9BUL5 403 aaPredicted RBP21.55■■□□□ 1.04
LETMD1-210ENST00000547555 AFF2P51816 1311 aa21.55■■□□□ 1.04
LETMD1-210ENST00000547555 RGPD2P0DJD1 1756 aa21.55■■□□□ 1.04
LETMD1-210ENST00000547555 RGPD1P0DJD0 1748 aa21.54■■□□□ 1.04
LETMD1-210ENST00000547555 APAF1O14727 1248 aa21.54■■□□□ 1.04
LETMD1-210ENST00000547555 PTMSP20962 102 aa21.54■■□□□ 1.04
LETMD1-210ENST00000547555 FSD2A1L4K1 749 aa21.53■■□□□ 1.04
LETMD1-210ENST00000547555 SKAP1Q86WV1 359 aa21.53■■□□□ 1.04
LETMD1-210ENST00000547555 RWDD1Q9H446 243 aaPredicted RBP21.53■■□□□ 1.04
LETMD1-210ENST00000547555 IGHDP01880 384 aa21.53■■□□□ 1.04
LETMD1-210ENST00000547555 GLIPR1L2Q4G1C9 344 aa21.53■■□□□ 1.04
LETMD1-210ENST00000547555 WDR17Q8IZU2 1322 aa21.52■■□□□ 1.04
LETMD1-210ENST00000547555 UNC5CLQ8IV45 518 aa21.52■■□□□ 1.04
LETMD1-210ENST00000547555 ANKRD24Q8TF21 1146 aa21.52■■□□□ 1.04
LETMD1-210ENST00000547555 USP21Q9UK80 565 aa21.51■■□□□ 1.03
LETMD1-210ENST00000547555 EIF4A2Q14240 407 aaKnown RBP21.5■■□□□ 1.03
LETMD1-210ENST00000547555 WWC1Q8IX03 1113 aa21.5■■□□□ 1.03
LETMD1-210ENST00000547555 CFAP53Q96M91 514 aa21.5■■□□□ 1.03
LETMD1-210ENST00000547555 ATRNO75882 1429 aa21.49■■□□□ 1.03
LETMD1-210ENST00000547555 CRB1P82279 1406 aa21.49■■□□□ 1.03
LETMD1-210ENST00000547555 NCAPD2Q15021 1401 aa21.49■■□□□ 1.03
LETMD1-210ENST00000547555 BCAR3O75815 825 aa21.49■■□□□ 1.03
LETMD1-210ENST00000547555 CLCN1P35523 988 aa21.49■■□□□ 1.03
LETMD1-210ENST00000547555 GOLGA6L3A6NEY3 463 aa21.48■■□□□ 1.03
LETMD1-210ENST00000547555 CANXP27824 592 aaKnown RBP21.48■■□□□ 1.03
LETMD1-210ENST00000547555 STRN4Q9NRL3 753 aa21.48■■□□□ 1.03
LETMD1-210ENST00000547555 CHMP5Q9NZZ3 219 aa21.48■■□□□ 1.03
LETMD1-210ENST00000547555 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.48■■□□□ 1.03
LETMD1-210ENST00000547555 WNK3Q9BYP7 1800 aa21.48■■□□□ 1.03
LETMD1-210ENST00000547555 IL13P35225 146 aa21.47■■□□□ 1.03
LETMD1-210ENST00000547555 EVA1CP58658 441 aa21.47■■□□□ 1.03
LETMD1-210ENST00000547555 LARP1Q6PKG0 1096 aaKnown RBP21.47■■□□□ 1.03
LETMD1-210ENST00000547555 MRE11P49959 708 aa21.47■■□□□ 1.03
LETMD1-210ENST00000547555 VPS72Q15906 364 aa21.47■■□□□ 1.03
LETMD1-210ENST00000547555 RUNDC1Q96C34 613 aa21.47■■□□□ 1.03
LETMD1-210ENST00000547555 LTV1Q96GA3 475 aaPredicted RBP21.47■■□□□ 1.03
LETMD1-210ENST00000547555 DDX11L8A8MPP1 907 aa21.46■■□□□ 1.03
LETMD1-210ENST00000547555 DIAPH1O60610 1272 aaKnown RBP21.46■■□□□ 1.03
LETMD1-210ENST00000547555 EIF5BO60841 1220 aaKnown RBP21.46■■□□□ 1.03
LETMD1-210ENST00000547555 ZNF772Q68DY9 489 aaPredicted RBP21.46■■□□□ 1.03
LETMD1-210ENST00000547555 CSB-PGBD3P0DP91 1061 aa21.45■■□□□ 1.02
LETMD1-210ENST00000547555 MCM4P33991 863 aa21.45■■□□□ 1.02
LETMD1-210ENST00000547555 RARSP54136 660 aaKnown RBP21.45■■□□□ 1.02
LETMD1-210ENST00000547555 SPINK5Q9NQ38 1064 aaPredicted RBP21.45■■□□□ 1.02
LETMD1-210ENST00000547555 GLI3P10071 1580 aa21.45■■□□□ 1.02
LETMD1-210ENST00000547555 SPATA31A5Q5VU36 1347 aa21.45■■□□□ 1.02
LETMD1-210ENST00000547555 SPATA31A7Q8IWB4 1347 aa21.45■■□□□ 1.02
LETMD1-210ENST00000547555 IGSF1Q8N6C5 1336 aa21.45■■□□□ 1.02
LETMD1-210ENST00000547555 CARD10Q9BWT7 1032 aa21.44■■□□□ 1.02
LETMD1-210ENST00000547555 RGS17Q9UGC6 210 aaPredicted RBP21.44■■□□□ 1.02
LETMD1-210ENST00000547555 TRPC5Q9UL62 973 aaPredicted RBP21.44■■□□□ 1.02
LETMD1-210ENST00000547555 TOM1L2Q6ZVM7 507 aa21.44■■□□□ 1.02
LETMD1-210ENST00000547555 CIZ1Q9ULV3 898 aaPredicted RBP21.44■■□□□ 1.02
LETMD1-210ENST00000547555 SPATA31A1Q5TZJ5 1347 aa21.43■■□□□ 1.02
LETMD1-210ENST00000547555 NBPF6Q5VWK0 638 aa21.43■■□□□ 1.02
LETMD1-210ENST00000547555 NBPF4Q96M43 638 aa21.43■■□□□ 1.02
LETMD1-210ENST00000547555 EYA1Q99502 592 aa21.43■■□□□ 1.02
LETMD1-210ENST00000547555 TBC1D2Q9BYX2 928 aa21.43■■□□□ 1.02
LETMD1-210ENST00000547555 MYH16Q9H6N6 1097 aa21.43■■□□□ 1.02
LETMD1-210ENST00000547555 NLRP2Q9NX02 1062 aa21.41■■□□□ 1.02
LETMD1-210ENST00000547555 KDRP35968 1356 aa21.41■■□□□ 1.02
LETMD1-210ENST00000547555 HDAC1Q13547 482 aaPredicted RBP21.4■■□□□ 1.02
LETMD1-210ENST00000547555 QTRT2Q9H974 415 aaKnown RBP21.4■■□□□ 1.02
LETMD1-210ENST00000547555 DISP2A7MBM2 1401 aa21.39■■□□□ 1.02
LETMD1-210ENST00000547555 PARP4Q9UKK3 1724 aaKnown RBP21.39■■□□□ 1.01
LETMD1-210ENST00000547555 CCDC146Q8IYE0 955 aa21.39■■□□□ 1.01
LETMD1-210ENST00000547555 GJD4Q96KN9 370 aaPredicted RBP21.39■■□□□ 1.01
LETMD1-210ENST00000547555 COG6Q9Y2V7 657 aa21.39■■□□□ 1.01
LETMD1-210ENST00000547555 THRAP3Q9Y2W1 955 aaKnown RBP21.39■■□□□ 1.01
LETMD1-210ENST00000547555 THSD7AQ9UPZ6 1657 aa21.39■■□□□ 1.01
LETMD1-210ENST00000547555 SEC24BO95487 1268 aa21.38■■□□□ 1.01
LETMD1-210ENST00000547555 SKOR2Q2VWA4 1001 aaPredicted RBP21.38■■□□□ 1.01
LETMD1-210ENST00000547555 SNX21Q969T3 373 aa21.38■■□□□ 1.01
LETMD1-210ENST00000547555 TCP11L2Q8N4U5 519 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms