RNA–Protein interactions for RNA: ENST00000547369.5

GCN1-203, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-203ENST00000547369 SMG6Q86US8 1419 aaKnown RBP25.96■■□□□ 1.75
GCN1-203ENST00000547369 PRIM1P49642 420 aaKnown RBP25.95■■□□□ 1.74
GCN1-203ENST00000547369 ZNF827Q17R98 1081 aa25.95■■□□□ 1.74
GCN1-203ENST00000547369 SLC27A3Q5K4L6 730 aa25.94■■□□□ 1.74
GCN1-203ENST00000547369 USHBP1Q8N6Y0 703 aa25.94■■□□□ 1.74
GCN1-203ENST00000547369 CARD14Q9BXL6 1004 aa25.94■■□□□ 1.74
GCN1-203ENST00000547369 CLSPNQ9HAW4 1339 aa25.93■■□□□ 1.74
GCN1-203ENST00000547369 HSP90AB2PQ58FF8 381 aa25.93■■□□□ 1.74
GCN1-203ENST00000547369 INSRP06213 1382 aa25.93■■□□□ 1.74
GCN1-203ENST00000547369 CGNL1Q0VF96 1302 aa25.92■■□□□ 1.74
GCN1-203ENST00000547369 NSD3Q9BZ95 1437 aa25.92■■□□□ 1.74
GCN1-203ENST00000547369 YY1P25490 414 aa25.92■■□□□ 1.74
GCN1-203ENST00000547369 RAPGEF4Q8WZA2 1011 aa25.92■■□□□ 1.74
GCN1-203ENST00000547369 SGIP1Q9BQI5 828 aa25.92■■□□□ 1.74
GCN1-203ENST00000547369 FLT4P35916 1363 aa25.92■■□□□ 1.74
GCN1-203ENST00000547369 KIF24Q5T7B8 1368 aa25.92■■□□□ 1.74
GCN1-203ENST00000547369 AKT1S1Q96B36 256 aa25.91■■□□□ 1.74
GCN1-203ENST00000547369 PCGF6Q9BYE7 350 aa25.91■■□□□ 1.74
GCN1-203ENST00000547369 NSD2O96028 1365 aa25.91■■□□□ 1.74
GCN1-203ENST00000547369 FHDC1Q9C0D6 1143 aaPredicted RBP25.89■■□□□ 1.74
GCN1-203ENST00000547369 LY75O60449 1722 aa25.88■■□□□ 1.73
GCN1-203ENST00000547369 TATP17735 454 aaPredicted RBP25.88■■□□□ 1.73
GCN1-203ENST00000547369 QSER1Q2KHR3 1735 aa25.88■■□□□ 1.73
GCN1-203ENST00000547369 SYT17Q9BSW7 474 aa25.87■■□□□ 1.73
GCN1-203ENST00000547369 KCNQ4P56696 695 aa25.86■■□□□ 1.73
GCN1-203ENST00000547369 EMILIN1Q9Y6C2 1016 aa25.86■■□□□ 1.73
GCN1-203ENST00000547369 ARXQ96QS3 562 aa25.85■■□□□ 1.73
GCN1-203ENST00000547369 SLC16A10Q8TF71 515 aa25.84■■□□□ 1.73
GCN1-203ENST00000547369 TUBGCP6Q96RT7 1819 aa25.83■■□□□ 1.73
GCN1-203ENST00000547369 PNPLA7Q6ZV29 1317 aa25.83■■□□□ 1.73
GCN1-203ENST00000547369 PCDH11XQ9BZA7 1347 aa25.83■■□□□ 1.73
GCN1-203ENST00000547369 PCDH11YQ9BZA8 1340 aa25.83■■□□□ 1.73
GCN1-203ENST00000547369 TFCP2L1Q9NZI6 479 aa25.82■■□□□ 1.72
GCN1-203ENST00000547369 CCNL1Q9UK58 526 aaPredicted RBP25.82■■□□□ 1.72
GCN1-203ENST00000547369 ANKRD26Q9UPS8 1709 aa25.8■■□□□ 1.72
GCN1-203ENST00000547369 MAP2P11137 1827 aaKnown RBP25.8■■□□□ 1.72
GCN1-203ENST00000547369 PPM1GO15355 546 aaPredicted RBP25.8■■□□□ 1.72
GCN1-203ENST00000547369 POLR3GLQ9BT43 218 aa25.79■■□□□ 1.72
GCN1-203ENST00000547369 MAP3K5Q99683 1374 aa25.79■■□□□ 1.72
GCN1-203ENST00000547369 COL24A1Q17RW2 1714 aa25.77■■□□□ 1.72
GCN1-203ENST00000547369 CYP27B1O15528 508 aa25.77■■□□□ 1.72
GCN1-203ENST00000547369 WASHC2AQ641Q2 1341 aa25.77■■□□□ 1.72
GCN1-203ENST00000547369 NCAPD2Q15021 1401 aa25.77■■□□□ 1.72
GCN1-203ENST00000547369 PKD1L3Q7Z443 1732 aa25.77■■□□□ 1.72
GCN1-203ENST00000547369 POLD1P28340 1107 aa25.76■■□□□ 1.71
GCN1-203ENST00000547369 MPRIPQ6WCQ1 1025 aa25.74■■□□□ 1.71
GCN1-203ENST00000547369 ITGB4P16144 1822 aa25.73■■□□□ 1.71
GCN1-203ENST00000547369 EIF4G2P78344 907 aaKnown RBP eCLIP25.73■■□□□ 1.71
GCN1-203ENST00000547369 POLKQ9UBT6 870 aa25.73■■□□□ 1.71
GCN1-203ENST00000547369 TOGARAM1Q9Y4F4 1720 aa25.73■■□□□ 1.71
GCN1-203ENST00000547369 EYA1Q99502 592 aa25.72■■□□□ 1.71
GCN1-203ENST00000547369 PALLDQ8WX93 1383 aa25.71■■□□□ 1.71
GCN1-203ENST00000547369 C5P01031 1676 aa25.71■■□□□ 1.71
GCN1-203ENST00000547369 HSPA5P11021 654 aaKnown RBP25.71■■□□□ 1.71
GCN1-203ENST00000547369 SPG7Q9UQ90 795 aa25.71■■□□□ 1.71
GCN1-203ENST00000547369 COL23A1Q86Y22 540 aaPredicted RBP25.7■■□□□ 1.7
GCN1-203ENST00000547369 KLHL34Q8N239 644 aa25.7■■□□□ 1.7
GCN1-203ENST00000547369 CHD4Q14839 1912 aa25.69■■□□□ 1.7
GCN1-203ENST00000547369 MSH5O43196 834 aa25.69■■□□□ 1.7
GCN1-203ENST00000547369 HMGB2P26583 209 aaKnown RBP25.69■■□□□ 1.7
GCN1-203ENST00000547369 NKX1-1Q15270 411 aaPredicted RBP25.69■■□□□ 1.7
GCN1-203ENST00000547369 TAF1LQ8IZX4 1826 aa25.69■■□□□ 1.7
GCN1-203ENST00000547369 TNNT2P45379 298 aaPredicted RBP25.68■■□□□ 1.7
GCN1-203ENST00000547369 SMARCC1Q92922 1105 aaPredicted RBP25.68■■□□□ 1.7
GCN1-203ENST00000547369 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.67■■□□□ 1.72e-11■□□□□ 11.2
GCN1-203ENST00000547369 CCER1Q8TC90 406 aaPredicted RBP25.66■■□□□ 1.7
GCN1-203ENST00000547369 PANK3Q9H999 370 aa25.66■■□□□ 1.7
GCN1-203ENST00000547369 EIF4A2Q14240 407 aaKnown RBP25.65■■□□□ 1.7
GCN1-203ENST00000547369 PIGBQ92521 554 aa25.65■■□□□ 1.7
GCN1-203ENST00000547369 GPR162Q16538 588 aa25.64■■□□□ 1.7
GCN1-203ENST00000547369 FLAD1Q8NFF5 587 aa25.63■■□□□ 1.69
GCN1-203ENST00000547369 IFNL2Q8IZJ0 200 aa25.62■■□□□ 1.69
GCN1-203ENST00000547369 C4BP0C0L5 1744 aa25.62■■□□□ 1.69
GCN1-203ENST00000547369 MSL1Q68DK7 614 aa25.61■■□□□ 1.69
GCN1-203ENST00000547369 ZNF784Q8NCA9 323 aaPredicted RBP25.61■■□□□ 1.69
GCN1-203ENST00000547369 PHKG2P15735 406 aa25.6■■□□□ 1.69
GCN1-203ENST00000547369 NLGN2Q8NFZ4 835 aa25.6■■□□□ 1.69
GCN1-203ENST00000547369 TMOD3Q9NYL9 352 aa25.6■■□□□ 1.69
GCN1-203ENST00000547369 UTRNP46939 3433 aa25.6■■□□□ 1.69
GCN1-203ENST00000547369 AK7Q96M32 723 aa25.59■■□□□ 1.69
GCN1-203ENST00000547369 PLEKHG2Q9H7P9 1386 aa25.58■■□□□ 1.69
GCN1-203ENST00000547369 IGSF1Q8N6C5 1336 aa25.58■■□□□ 1.69
GCN1-203ENST00000547369 LOC102724428A0A0B4J2F2 783 aa25.57■■□□□ 1.68
GCN1-203ENST00000547369 SIK1P57059 783 aa25.57■■□□□ 1.68
GCN1-203ENST00000547369 PELP1Q8IZL8 1130 aaKnown RBP25.57■■□□□ 1.68
GCN1-203ENST00000547369 UBR3Q6ZT12 1888 aa25.57■■□□□ 1.68
GCN1-203ENST00000547369 AMIGO3Q86WK7 504 aa25.55■■□□□ 1.68
GCN1-203ENST00000547369 ASAP1Q9ULH1 1129 aa25.55■■□□□ 1.68
GCN1-203ENST00000547369 MORC1Q86VD1 984 aa25.54■■□□□ 1.68
GCN1-203ENST00000547369 LINC00116Q8NCU8 138 aa25.53■■□□□ 1.68
GCN1-203ENST00000547369 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.52■■□□□ 1.68
GCN1-203ENST00000547369 PHF14O94880 888 aa25.52■■□□□ 1.68
GCN1-203ENST00000547369 ATG3Q9NT62 314 aa25.52■■□□□ 1.68
GCN1-203ENST00000547369 SMIM5Q71RC9 77 aa25.51■■□□□ 1.67
GCN1-203ENST00000547369 SSFA2P28290 1259 aa25.5■■□□□ 1.67
GCN1-203ENST00000547369 ATP6V1AP38606 617 aa25.5■■□□□ 1.67
GCN1-203ENST00000547369 ITPK1Q13572 414 aa25.5■■□□□ 1.67
GCN1-203ENST00000547369 PLEKHO1Q53GL0 409 aaPredicted RBP25.5■■□□□ 1.67
GCN1-203ENST00000547369 KNSTRNQ9Y448 316 aa25.5■■□□□ 1.67
GCN1-203ENST00000547369 CD2APQ9Y5K6 639 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms