RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 GBP4Q96PP9 640 aa18.16■□□□□ 0.5
LETMD1-209ENST00000547318 KDRP35968 1356 aa18.16■□□□□ 0.5
LETMD1-209ENST00000547318 HTATSF1O43719 755 aaKnown RBP18.15■□□□□ 0.5
LETMD1-209ENST00000547318 HSP90AB1P08238 724 aaKnown RBP18.15■□□□□ 0.5
LETMD1-209ENST00000547318 RTL1A6NKG5 1358 aa18.15■□□□□ 0.5
LETMD1-209ENST00000547318 FLT4P35916 1363 aa18.15■□□□□ 0.5
LETMD1-209ENST00000547318 CRB1P82279 1406 aa18.15■□□□□ 0.5
LETMD1-209ENST00000547318 SKOR2Q2VWA4 1001 aaPredicted RBP18.15■□□□□ 0.5
LETMD1-209ENST00000547318 EID1Q9Y6B2 187 aa18.14■□□□□ 0.49
LETMD1-209ENST00000547318 LRRC37A3O60309 1634 aa18.14■□□□□ 0.49
LETMD1-209ENST00000547318 ANKARQ7Z5J8 1434 aa18.13■□□□□ 0.49
LETMD1-209ENST00000547318 FSD2A1L4K1 749 aa18.13■□□□□ 0.49
LETMD1-209ENST00000547318 K7ELQ4 463 aaPredicted RBP18.13■□□□□ 0.49
LETMD1-209ENST00000547318 ELL2O00472 640 aaPredicted RBP18.13■□□□□ 0.49
LETMD1-209ENST00000547318 HMMRO75330 724 aa18.13■□□□□ 0.49
LETMD1-209ENST00000547318 CASC1Q6TDU7 716 aa18.13■□□□□ 0.49
LETMD1-209ENST00000547318 FAM83GA6ND36 823 aa18.13■□□□□ 0.49
LETMD1-209ENST00000547318 GOLGA6L3A6NEY3 463 aa18.13■□□□□ 0.49
LETMD1-209ENST00000547318 C1orf115Q9H7X2 142 aa18.13■□□□□ 0.49
LETMD1-209ENST00000547318 TTC22Q5TAA0 569 aa18.12■□□□□ 0.49
LETMD1-209ENST00000547318 PLEKHM2Q8IWE5 1019 aa18.12■□□□□ 0.49
LETMD1-209ENST00000547318 KIF2CQ99661 725 aa18.12■□□□□ 0.49
LETMD1-209ENST00000547318 TBX22Q9Y458 520 aa18.12■□□□□ 0.49
LETMD1-209ENST00000547318 NCKAP5LQ9HCH0 1330 aa18.12■□□□□ 0.49
LETMD1-209ENST00000547318 TRAK2O60296 914 aa18.11■□□□□ 0.49
LETMD1-209ENST00000547318 RABEP1Q15276 862 aa18.11■□□□□ 0.49
LETMD1-209ENST00000547318 GAS2L2Q8NHY3 880 aa18.11■□□□□ 0.49
LETMD1-209ENST00000547318 CCT4P50991 539 aaKnown RBP18.11■□□□□ 0.49
LETMD1-209ENST00000547318 RAB3GAP1Q15042 981 aa18.11■□□□□ 0.49
LETMD1-209ENST00000547318 BABAM1Q9NWV8 329 aa18.11■□□□□ 0.49
LETMD1-209ENST00000547318 N4BP2Q86UW6 1770 aaPredicted RBP18.1■□□□□ 0.49
LETMD1-209ENST00000547318 CEP85Q6P2H3 762 aa18.1■□□□□ 0.49
LETMD1-209ENST00000547318 CLEC17AQ6ZS10 378 aa18.1■□□□□ 0.49
LETMD1-209ENST00000547318 AEBP1Q8IUX7 1158 aa18.1■□□□□ 0.49
LETMD1-209ENST00000547318 RTF1Q92541 710 aaKnown RBP18.1■□□□□ 0.49
LETMD1-209ENST00000547318 XRN1Q8IZH2 1706 aaKnown RBP18.09■□□□□ 0.49
LETMD1-209ENST00000547318 DCTN1Q14203 1278 aa18.09■□□□□ 0.49
LETMD1-209ENST00000547318 MSH6P52701 1360 aa18.09■□□□□ 0.49
LETMD1-209ENST00000547318 MRE11P49959 708 aa18.08■□□□□ 0.49
LETMD1-209ENST00000547318 CACNA1FO60840 1977 aa18.08■□□□□ 0.48
LETMD1-209ENST00000547318 IGSF1Q8N6C5 1336 aa18.08■□□□□ 0.48
LETMD1-209ENST00000547318 HSP90AA1P07900 732 aaKnown RBP18.07■□□□□ 0.48
LETMD1-209ENST00000547318 GSPT1P15170 499 aaKnown RBP18.07■□□□□ 0.48
LETMD1-209ENST00000547318 OSBPL3Q9H4L5 887 aa18.07■□□□□ 0.48
LETMD1-209ENST00000547318 PXDNLA1KZ92 1463 aa18.07■□□□□ 0.48
LETMD1-209ENST00000547318 SPRYD3Q8NCJ5 442 aa18.06■□□□□ 0.48
LETMD1-209ENST00000547318 PIK3C2AO00443 1686 aa18.06■□□□□ 0.48
LETMD1-209ENST00000547318 MAP3K19Q56UN5 1328 aa18.06■□□□□ 0.48
LETMD1-209ENST00000547318 LTKP29376 864 aa18.06■□□□□ 0.48
LETMD1-209ENST00000547318 HSP90AB2PQ58FF8 381 aa18.06■□□□□ 0.48
LETMD1-209ENST00000547318 FAM208AQ9UK61 1670 aaKnown RBP18.05■□□□□ 0.48
LETMD1-209ENST00000547318 GOLGA6L22H0YM25 854 aa18.05■□□□□ 0.48
LETMD1-209ENST00000547318 REC8O95072 547 aa18.05■□□□□ 0.48
LETMD1-209ENST00000547318 PLPPR3Q6T4P5 718 aa18.05■□□□□ 0.48
LETMD1-209ENST00000547318 MCM10Q7L590 875 aa18.05■□□□□ 0.48
LETMD1-209ENST00000547318 TNPO1Q92973 898 aaKnown RBP18.05■□□□□ 0.48
LETMD1-209ENST00000547318 CHMP4AQ9BY43 222 aa18.04■□□□□ 0.48
LETMD1-209ENST00000547318 TSPYL4Q9UJ04 414 aa18.04■□□□□ 0.48
LETMD1-209ENST00000547318 STK31Q9BXU1 1019 aa18.03■□□□□ 0.48
LETMD1-209ENST00000547318 SLC4A2P04920 1241 aa18.03■□□□□ 0.48
LETMD1-209ENST00000547318 CWC22Q9HCG8 908 aaKnown RBP18.03■□□□□ 0.48
LETMD1-209ENST00000547318 AMOTL2Q9Y2J4 779 aa18.03■□□□□ 0.48
LETMD1-209ENST00000547318 IBTKQ9P2D0 1353 aaPredicted RBP18.02■□□□□ 0.48
LETMD1-209ENST00000547318 NUCB2P80303 420 aa18.02■□□□□ 0.48
LETMD1-209ENST00000547318 USP26Q9BXU7 913 aa18.02■□□□□ 0.48
LETMD1-209ENST00000547318 GNAI3P08754 354 aa18.01■□□□□ 0.47
LETMD1-209ENST00000547318 MTHFSDQ2M296 383 aaKnown RBP18.01■□□□□ 0.47
LETMD1-209ENST00000547318 CCDC30Q5VVM6 783 aa18.01■□□□□ 0.47
LETMD1-209ENST00000547318 THEMISQ8N1K5 641 aaPredicted RBP18.01■□□□□ 0.47
LETMD1-209ENST00000547318 RTN4Q9NQC3 1192 aaKnown RBP18.01■□□□□ 0.47
LETMD1-209ENST00000547318 ST18O60284 1047 aa18■□□□□ 0.47
LETMD1-209ENST00000547318 GNAI2P04899 355 aa18■□□□□ 0.47
LETMD1-209ENST00000547318 AMPHP49418 695 aa18■□□□□ 0.47
LETMD1-209ENST00000547318 NGDNQ8NEJ9 315 aaKnown RBP18■□□□□ 0.47
LETMD1-209ENST00000547318 MEIS3Q99687 375 aa18■□□□□ 0.47
LETMD1-209ENST00000547318 CEP170BQ9Y4F5 1589 aaPredicted RBP18■□□□□ 0.47
LETMD1-209ENST00000547318 FER1L4A9Z1Z3 1794 aa18■□□□□ 0.47
LETMD1-209ENST00000547318 EPB41L2O43491 1005 aaKnown RBP17.99■□□□□ 0.47
LETMD1-209ENST00000547318 XRCC6P12956 609 aaKnown RBP eCLIP17.99■□□□□ 0.47
LETMD1-209ENST00000547318 MARF1Q9Y4F3 1742 aaKnown RBP17.99■□□□□ 0.47
LETMD1-209ENST00000547318 SDSP20132 328 aa17.98■□□□□ 0.47
LETMD1-209ENST00000547318 AOX1Q06278 1338 aa17.98■□□□□ 0.47
LETMD1-209ENST00000547318 GNAT3A8MTJ3 354 aa17.98■□□□□ 0.47
LETMD1-209ENST00000547318 ERC2O15083 957 aa17.98■□□□□ 0.47
LETMD1-209ENST00000547318 KRT24Q2M2I5 525 aa17.98■□□□□ 0.47
LETMD1-209ENST00000547318 EYA1Q99502 592 aa17.98■□□□□ 0.47
LETMD1-209ENST00000547318 SRCIN1Q9C0H9 1055 aa17.98■□□□□ 0.47
LETMD1-209ENST00000547318 RGPD8O14715 1765 aaPredicted RBP17.97■□□□□ 0.47
LETMD1-209ENST00000547318 MAP3K5Q99683 1374 aa17.97■□□□□ 0.47
LETMD1-209ENST00000547318 MCM2P49736 904 aa17.97■□□□□ 0.47
LETMD1-209ENST00000547318 TUBGCP6Q96RT7 1819 aa17.97■□□□□ 0.47
LETMD1-209ENST00000547318 NWD1Q149M9 1564 aa17.97■□□□□ 0.47
LETMD1-209ENST00000547318 GRPEL1Q9HAV7 217 aa17.96■□□□□ 0.47
LETMD1-209ENST00000547318 CD2BP2O95400 341 aaKnown RBP17.95■□□□□ 0.46
LETMD1-209ENST00000547318 SLC26A8Q96RN1 970 aa17.95■□□□□ 0.46
LETMD1-209ENST00000547318 PHRF1Q9P1Y6 1649 aaKnown RBP17.95■□□□□ 0.46
LETMD1-209ENST00000547318 PDE1AP54750 535 aa17.94■□□□□ 0.46
LETMD1-209ENST00000547318 KLHL40Q2TBA0 621 aa17.94■□□□□ 0.46
LETMD1-209ENST00000547318 HOXB7P09629 217 aa17.93■□□□□ 0.46
LETMD1-209ENST00000547318 HOXC9P31274 260 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms